Id Trinity | TRINITY_DN49865_c0_g2_i1 |
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Name Transcript | Ll_transcript_341147 |
Sequence | CTTATCATTGTAGGACCTTGTCCTTTATGATCTTATTGCATTTCCCTTCCCTTCTTCTTTTCATTGCTATTGCAATCTTCAACTTCTTATCTTTTTGTTC TTTTTTGCTGAACAGAAACATTGGCCCATAATAAGAACTAACAACACTTATTTGAGATTCCTCAATCTCACTTTGGTTTATTCACTTCAGGTCAAATTGA GGAATGCTAAGAAAATGGGTAGGAAAGGAAATTGGTTTTTGTCTGTGAAGAAAGCTCTCAGCCCTGAGCCAAAGGAGAGGAAAGACCAGAAGTCAAGCAA ATCAAAGAAGAAATGGTTCGGGAAGCAAAAGTTGCAGACTTCAGAGGCGTACTCTGAAACTGATAACGCACCTTCTCTTCCTGCACCTGAGGAGATTATT TTAACTTATGTTGAGAATGAAAACAGTAATGATCATGTTGTCGAAGTTGCAACTGTCTTAGAAGCAGAGGAACCTGTTCTTGCTGTTCAGACAACAGCTG ATAAGGTTCAAATCACTGCAGTTGATCAGTTTACTGGTAAACCGAATGATGAAGTGGCGGCAATGAGGATTCAAACAGCTTTTCGCGGATACATGGCAAG AAGAGCATTGCGGGCTTTAAGGGGGCTGGACAGGTTAAAGTCACTGATGGAAGGGAAAGTTGTAAAACGCCAAACCATTAATACCCTTCGCTCTATGCAG ACTTTTGCTCATTTACAATCTCAGATTCATTCTAGGAGGCTCAGGATGTTAGAGGAGACACAAGCTATGCAGAAACTGCTCTTACAGAAGCATGCAAAAG AGCTAGAGATCGTGCGGGTATCTGGATTTCAGTGCCCTGATTTATTTTGAATTCTAATCTATTGAAATGGAGCTAATATTTATTTGACTTTTAACTTAAT GCTTTTGGGATGCTTTTAACTTGTTTCAAATTGTCATAACAGCTTGGGGAGGAATGGGATGAGAGTATACAATCCAAAGAACAAATTGAAGCCAAGTTAC TATGCAAGTACGAGGCCGCAAGAAGAAGAGAAAGAGCACTGGCTTATTCATACTCTCATCAGGTTTTCTATTTTTTTCTTATTGATTTACAT BLAST |
Tissue | pods |
Gene name | LI_gene_172831; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341147
Blastp | Protein IQ-DOMAIN 1 from Arabidopsis with 39.09% of identity |
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Blastx | Protein IQ-DOMAIN 1 from Arabidopsis with 54.72% of identity |
Eggnog | NA(ENOG411040N) |
Kegg | Link to kegg annotations (AT3G09710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443054.1) |
Pfam | IQ calmodulin-binding motif (PF00612.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |