| Id Trinity | TRINITY_DN49865_c0_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_341162 |
| Sequence | CTTATCATTGTAGGACCTTGTCCTTTATGATCTTATTGCATTTCCCTTCCCTTCTTCTTTTCATTGCTATTGCAATCTTCAACTTCTTATCTTTTTGTTC TTTTTTGCTGAACAGAAACATTGGCCCATAATAAGAACTAACAACACTTATTTGAGATTCCTCAATCTCACTTTGGTTTATTCACTTCAGGTCAAATTGA GGAATGCTAAGAAAATGGGTAGGAAAGGAAATTGGTTTTTGTCTGTGAAGAAAGCTCTCAGCCCTGAGCCAAAGGAGAGGAAAGACCAGAAGTCAAGCAA ATCAAAGAAGAAATGGTTCGGGAAGCAAAAGTTGCAGACTTCAGAGGCGTACTCTGAAACTGATAACGCACCTTCTCTTCCTGCACCTGAGGAGATTATT TTAACTTATGTTGAGAATGAAAACAGTAATGATCATGTTGTCGAAGTTGCAACTGTCTTAGAAGCAGAGGAACCTGTTCTTGCTGTTCAGACAACAGCTG ATAAGGTTCAAATCACTGCAGTTGATCAGTTTACTGGTAAACCGAATGATGAAGTGGCGGCAATGAGGATTCAAACAGCTTTTCGCGGATACATGGCAAG AAGAGCATTGCGGGCTTTAAGGGGGCTGGACAGGTTAAAGTCACTGATGGAAGGGAAAGTTGTAAAACGCCAAACCATTAATACCCTTCGCTCTATGCAG ACTTTTGCTCATTTACAATCTCAGATTCATTCTAGGAGGCTCAGGATGTTAGAGGAGACACAAGCTATGCAGAAACTGCTCTTACAGAAGCATGCAAAAG AGCTAGAGATCGTGCGGGTATCTGGATTTCAGTGCCCTGATTTATTTTGAATTCTAATCTATTGAAATGGAGCTAATATTTATTTGACTTTTAACTTAAT GCTTTTGGGATGCTTTTAACTTGTTTCAAATTGTCATAACAGCTTGGGGAGGAATGGGATGAGAGTATACAATCCAAAGAACAAATTGAAGCCAAGTTAC TATGCAAGTACGAGGCCGCAAGAAGAAGAGAAAGAGCACTGGCTTATTCATACTCTCATCAGAAAAATGGAAAGAATTCATCTAGATCTATAAATCCATT GTTCATCGATCCAACCAATCCTTCCTGGGGTTGGAGCTGGTTGGAACGATGGACGACAGCCCGGCTTTGGGAGAGCCATAGTCTGTCGGAGAAAGAAAAA AACGAAAATTCATCTGTAAAAAGTTCAACCCGAGGCATTACGAGTGCTGAGATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCATTCTC CAACCGCCAGCCAAACTCCGGGCTCTCCTAGCTTTCAGTCCCATTCAAATCCTCCCAAGCCAGTTTCTGCAGCAGTTGCTAAGAAACTGAAGAAAGTGAG CCCAAAGGACAGTTGGGTAATAGACGATGACACCAAAAGCATGGTCAGTGTGCAGTCAGAGCGGTTTCGGAGGCACTCCATTGCAGGGTCAACAATAAGA GATGATGAAAGCCTTGCAAGCTCTCCAGCACTTCCAAGTTACATGGTACCAACTAAATCTGCAAAAGCTAAGTCCAGGATGCAAAGTCCATTAGCCACAG AGAATGGCACCACGGAGAAGGTGACTGTTGAGACTGCAAAGAAAAGGCTCAGTTTCCCAGCATCACCTGCCAGACCAAGGTGGCATTCTGATCCACGAAA GGTCGGAAGCAGCTTAACTTCCGAAATCACTGTGGGAAATGGCGTGGTTGCTTGATCATTAACCAGAGGAAAAGGATGGTAATATCATTGAAGAAACATG ACAAGTTCATTTGAAGTGTCCATTTATTTATGGTATTTATCATGTGTATCTTATCATTTATTTGAGACTATTGATTTCGGGGTGAAAATTGCTTTACTTT CCAAATTTATCTATTTCTACTTTGATGTATTTACTCACAATTCGTCCCGAGGCGAAAAAAGGTGGTTCAAGATAGTATTATGACAAAGAACAAGTCAGTG GTCAGAATCCTTTTGAAGCTTCCCTCCAAGGGATGGATATTATTCTGCTAAAGTTCTTGATTCTTATTTGTGATATAAAATGTATATTTGATATTATTAT CTAATTTTCCTATGCCACTATAGACTTATATAGAGGGTCTCATACTTCTCTGGTCCCTGTGCATAAGGCTTTTTTATAGCACTAGCTTATCCTTGATTTC TTTGATGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_172831; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341162
| Blastp | Protein IQ-DOMAIN 1 from Arabidopsis with 39.09% of identity |
|---|---|
| Blastx | Protein IQ-DOMAIN 1 from Arabidopsis with 42.86% of identity |
| Eggnog | NA(ENOG411040N) |
| Kegg | Link to kegg annotations (AT3G09710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443054.1) |
| Pfam | IQ calmodulin-binding motif (PF00612.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |