Ll_transcript_341154

• Id Trinity: TRINITY_DN49865_c0_g2_i6
• Name Transcript: Ll_transcript_341154
• Sequence: CTTATCATTGTAGGACCTTGTCCTTTATGATCTTATTGCATTTCCCTTCCCTTCTTCTTTTCATTGCTATTGCAATCTTCAACTTCTTATCTTTTTGTTC TTTTTTGCTGAACAGAAACATTGGCCCATAATAAGAACTAACAACACTTATTTGAGATTCCTCAATCTCACTTTGGTTTATTCACTTCAGGTCAAATTGA GGAATGCTAAGAAAATGGGTAGGAAAGGAAATTGGTTTTTGTCTGTGAAGAAAGCTCTCAGCCCTGAGCCAAAGGAGAGGAAAGACCAGAAGTCAAGCAA ATCAAAGAAGAAATGGTTCGGGAAGCAAAAGTTGCAGACTTCAGAGGCGTACTCTGAAACTGATAACGCACCTTCTCTTCCTGCACCTGAGGAGATTATT TTAACTTATGTTGAGAATGAAAACAGTAATGATCATGTTGTCGAAGTTGCAACTGTCTTAGAAGCAGAGGAACCTGTTCTTGCTGTTCAGACAACAGCTG ATAAGGTTCAAATCACTGCAGTTGATCAGTTTACTGGTAAACCGAATGATGAAGTGGCGGCAATGAGGATTCAAACAGCTTTTCGCGGATACATGGCAAG AAGAGCATTGCGGGCTTTAAGGGGGCTGGACAGGTTAAAGTCACTGATGGAAGGGAAAGTTGTAAAACGCCAAACCATTAATACCCTTCGCTCTATGCAG ACTTTTGCTCATTTACAATCTCAGATTCATTCTAGGAGGCTCAGGATGTTAGAGGAGACACAAGCTATGCAGAAACTGCTCTTACAGAAGCATGCAAAAG AGCTAGAGATCGTGCGGCTTGGGGAGGAATGGGATGAGAGTATACAATCCAAAGAACAAATTGAAGCCAAGTTACTATGCAAGTACGAGGCCGCAAGAAG AAGAGAAAGAGCACTGGCTTATTCATACTCTCATCAGAAAAATGGAAAGAATTCATCTAGATCTATAAATCCATTGTTCATCGATCCAACCAATCCTTCC TGGGGTTGGAGCTGGTTGGAACGATGGACGACAGCCCGGCTTTGGGAGAGCCATAGTCTGTCGGAGAAAGAAAAAAACGAAAATTCATCTGTAAAAAGTT CAACCCGAGGCATTACGAGTGCTGAGATCAGCAAATCATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCATTCTCCAACCGCCAGCCAAACTCCGGGCTC TCCTAGCTTTCAGTCCCATTCAAATCCTCCCAAGCCAGTTTCTGCAGCAGTTGCTAAGAAACTGAAGAAAGTGAGCCCAAAGGACAGTTGGGTAATAGAC GATGACACCAAAAGCATGGTCAGTGTGCAGTCAGAGCGGTTTCGGAGGCACTCCATTGCAGGGTCAACAATAAGAGATGATGAAAGCCTTGCAAGCTCTC CAGCACTTCCAAGTTACATGGTACCAACTAAATCTGCAAAAGCTAAGTCCAGGATGCAAAGTCCATTAGCCACAGAGAATGGCACCACGGAGAAGGTGAC TGTTGAGACTGCAAAGAAAAGGCTCAGTTTCCCAGCATCACCTGCCAGACCAAGGTGGCATTCTGATCCACGAAAGGTCGGAAGCAGCTTAACTTCCGAA ATCACTGTGGGAAATGGCGTGGTTGCTTGATCATTAACCAGAGGAAAAGGATGGTAATATCATTGAAGAAACATGACAAGTTCATTTGAAGTGTCCATTT ATTTATGGTATTTATCATGTGTATCTTATCATTTATTTGAGACTATTGATTTCGGGGTGAAAATTGCTTTACTTTCCAAATTTATCTATTTCTACTTTGA TGTATTTACTCACAATTCGTCCCGAGGCGAAAAAAGGTGGTTCAAGATAGTATTATGACAAAGAACAAGTCAGTGGTCAGAATCCTTTTGAAGCTTCCCT CCAAGGGATGGATATTATTCTGCTAAAGTTCTTGATTCTTATTTGTGATATAAAATGTATATTTGATATTATTATCTAATTTTCCTATGCCACTATAGAC TTATATAGAGGGTCTCATACTTCTCTGGTCCCTGTGCATAAGGCTTTTTTATAGCACTAGCTTATCCTTGATTTCTTTGATGT
• Tissue: pods
• Gene name: LI_gene_172831;
• Additional information: details;

Expression of Ll_transcript_341154

FPKM

• PAB: 26.4
• PNAB: 21.8
• PS1: 24.6
• PS2: 26.2
• PS3: 38.1
• PW1: 28.3
• PW2: 32.9
• PW3: 20.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341154

• Blastp: Protein IQ-DOMAIN 1 from Arabidopsis with 43.53% of identity
• Blastx: Protein IQ-DOMAIN 1 from Arabidopsis with 45.95% of identity
• Eggnog: NA(ENOG411040N)
• Kegg: Link to kegg annotations (AT3G09710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443054.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;