Ll_transcript_341156

• Id Trinity: TRINITY_DN49865_c0_g2_i7
• Name Transcript: Ll_transcript_341156
• Sequence: CCACTTTTCATCTTCACTGGACCCTCAAATTTAACTCCAAAGCTTTGTTCTTTTTGTTATTCTGCACTTACCCATTTCCTCTTTTTTTATCTCTGTTAAC TATTAATTTCTTTCATTTTTTTATTTTGTTTGGTTGTAATTCTTGCTATTTCAGCATCATGTTTGGTTGGAAAATTATGAGTAGATCATTTAAATAGAAA ATTATAATTCTCTGTTAATTTGCAGTGAATATTCGAAAGGAAGGTAATTTAAGTTGTTCTTATTGTTGGATTCAGTACTATTTGGAGTTTGAACAATAGA TTAGAAAACTGTTGTTTGGTTTTTCTGATGTTGTTGATATTCCTTTATCAATGTTTGATTCATAGGGAGTTATGGGTTAGGATTTTCAAAGTGATTAAAT TTTCTCTCTATCTTCGTGAATTGTTTAGTTTGTTTTGATTAATTATTAGGTAAAAAATGCTTGTTCTATCTATTTTAAAAAAATTCTTACAAAAGAGGTC TCAGTAAAATTTTGATTATAAGTTTTGTTTTGAATACAATTTAAGCTAATCGGAGCATACATAATTGAAGATGAAATGATGAATTCTCTAGCAGAAAGTG GATGCTCTTTTCTTTTGTTAGGAAAAAAGTGCTTACATGATTAATGAGATTGGATTTCAGAACTCAGAAGATGCCATTGGATTTCCGATTCAGTGCTAAA TTATTTTACATTGTAAATCGAATTACTAAAAATACATGTTTTCTGTATGAAAGGTCAAATTGAGGAATGCTAAGAAAATGGGTAGGAAAGGAAATTGGTT TTTGTCTGTGAAGAAAGCTCTCAGCCCTGAGCCAAAGGAGAGGAAAGACCAGAAGTCAAGCAAATCAAAGAAGAAATGGTTCGGGAAGCAAAAGTTGCAG ACTTCAGAGGCGTACTCTGAAACTGATAACGCACCTTCTCTTCCTGCACCTGAGGAGATTATTTTAACTTATGTTGAGAATGAAAACAGTAATGATCATG TTGTCGAAGTTGCAACTGTCTTAGAAGCAGAGGAACCTGTTCTTGCTGTTCAGACAACAGCTGATAAGGTTCAAATCACTGCAGTTGATCAGTTTACTGG TAAACCGAATGATGAAGTGGCGGCAATGAGGATTCAAACAGCTTTTCGCGGATACATGGCAAGAAGAGCATTGCGGGCTTTAAGGGGGCTGGACAGGTTA AAGTCACTGATGGAAGGGAAAGTTGTAAAACGCCAAACCATTAATACCCTTCGCTCTATGCAGACTTTTGCTCATTTACAATCTCAGATTCATTCTAGGA GGCTCAGGATGTTAGAGGAGACACAAGCTATGCAGAAACTGCTCTTACAGAAGCATGCAAAAGAGCTAGAGATCGTGCGGCTTGGGGAGGAATGGGATGA GAGTATACAATCCAAAGAACAAATTGAAGCCAAGTTACTATGCAAGTACGAGGCCGCAAGAAGAAGAGAAAGAGCACTGGCTTATTCATACTCTCATCAG AAAAATGGAAAGAATTCATCTAGATCTATAAATCCATTGTTCATCGATCCAACCAATCCTTCCTGGGGTTGGAGCTGGTTGGAACGATGGACGACAGCCC GGCTTTGGGAGAGCCATAGTCTGTCGGAGAAAGAAAAAAACGAAAATTCATCTGTAAAAAGTTCAACCCGAGGCATTACGAGTGCTGAGATCAGCAAATC ATTTGCTCGTTTCCAGCTCAATTCTGAAAAGCATTCTCCAACCGCCAGCCAAACTCCGGGCTCTCCTAGCTTTCAGTCCCATTCAAATCCTCCCAAGCCA GTTTCTGCAGCAGTTGCTAAGAAACTGAAGAAAGTGAGCCCAAAGGACAGTTGGGTAATAGACGATGACACCAAAAGCATGGTCAGTGTGCAGTCAGAGC GGTTTCGGAGGCACTCCATTGCAGGGTCAACAATAAGAGATGATGAAAGCCTTGCAAGCTCTCCAGCACTTCCAAGTTACATGGTACCAACTAAATCTGC AAAAGCTAAGTCCAGGATGCAAAGTCCATTAGCCACAGAGAATGGCACCACGGAGAAGGTGACTGTTGAGACTGCAAAGAAAAGGCTCAGTTTCCCAGCA TCACCTGCCAGACCAAGGTGGCATTCTGATCCACGAAAGGTCGGAAGCAGCTTAACTTCCGAAATCACTGTGGGAAATGGCGTGGTTGCTTGATCATTAA CCAGAGGAAAAGGATGGTAATATCATTGAAGAAACATGACAAGTTCATTTGAAGTGTCCATTTATTTATGGTATTTATCATGTGTATCTTATCATTTATT TGAGACTATTGATTTCGGGGTGAAAATTGCTTTACTTTCCAAATTTATCTATTTCTACTTTGATGTATTTACTCACAATTCGTCCCGAGGCGAAAAAAGG TGGTTCAAGATAGTATTATGACAAAGAACAAGTCAGTGGTCAGAATCCTTTTGAAGCTTCCCTCCAAGGGATGGATATTATTCTGCTAAAGTTCTTGATT CTTATTTGTGATATAAAATGTATATTTGATATTATTATCTAATTTTCCTATGCCACTATAGACTTATATAGAGGGTCTCATACTTCTCTGGTCCCTGTGC ATAAGGCTTTTTTATAGCACTAGCTTATCCTTGATTTCTTTGATGT
• Tissue: pods
• Gene name: LI_gene_172831;
• Additional information: details;

Expression of Ll_transcript_341156

FPKM

• PAB: 1.1
• PNAB: 7.5
• PS1: 23.3
• PS2: 28.8
• PS3: 43
• PW1: 8.5
• PW2: 16.9
• PW3: 12.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341156

• Blastp: Protein IQ-DOMAIN 1 from Arabidopsis with 43.53% of identity
• Blastx: Protein IQ-DOMAIN 1 from Arabidopsis with 45.95% of identity
• Eggnog: NA(ENOG411040N)
• Kegg: Link to kegg annotations (AT3G09710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443054.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;