| Id Trinity | TRINITY_DN49867_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_343636 |
| Sequence | TATTGATTTACTTTTCTAAAACTATTTAGGCACGAAAAATACACACAAACTAAATAATACAAGACATAGTAATTAACAACAACAATGGAAGTAACAAGTG CTGTTCATTCAGTTGGATTTCTACATTCACAAACACACTCTTCACACGTTGAAAACCTCAACGACAAAGCCTTCTTCATCTCCACAACAATCAAACGAAC AAGGGTAGGTCCTGTTACTCATTATCACCGTCCAAACCACTTCAACAAAGGTTCTAGACACAGACACAGTCTCATCATAAACTCTTCTTCTGCTTCAAAT GCTACTACTACCACAGAATCTTATGCTTCTGCTGATGAATCTCTTTCTGAGTTGGAAAAGATAAAGAAAAAGTGCCTTACATGGAAATGGAAGGGACAAT ATTCAATCAATTATTTTGTTTCTTCTGATGCAGATTCATCTCAGAAGTTGCAAACCAATTATCCTCCTTTGCTACTTGTTCATGGCTTTGGTGCTTCTAT TCCTCATTGGCGAAGGAATATCAAGACACTGTCCCAGAACTATACTGTTTATGCTATTGACCTTCTTGGTTTTGGGGCTTCAGATAAGCCTCCAAACTTT TCATATACCATGGAAACATGGGCTCAGCTGATCCAAGATTTCTTGGATGAAGTTATTCAGAAGCCAACTGTTCTAATAGGAAACTCTGTTGGAAGTCTTG CTTGTGTCATTGCTGCCTCAGATTCAAATCAAACACTAGTTAGAGGAATTGTGCTGTTAAACTGTTCTGGTGGCATGAATAACAAAGCAATTGTTGATGA TTGGAGGATCAAACTATTGTTACCTTTGCTTTGGCTGATTGATTTTTTATTGAAGCAAAAGGGAATTGCTTCAGCAATTTTTGAGCGTGTTAAGCAGAGA GATAATTTGAGGAATATTTTGAGTTCAGTTTATGGAAATAAGGAGGCAGTGGATGAAGAACTGGTGGAGATCATTAGGGTACCAGCAGATGAACCAGGGG CCTTAGATGCATTTGTGTCCATTGTAACAGGACCACCAGGGCCTAATCCTGTGCAGTTAATGTCAAATATCTCCAAGCCTGTTCTACTTTTATGGGGAGA TCAAGACACTTTTACTCCACTTGATGGACCTGTTGGCAAGTACTTTTCTTCATTGCCATCTCAACAAGAAAATGTTAAGCTCTTTGTTCTTGAAGGGGTT GGACATTGTCCTCATGATGATAGGCCTGAATTAGTCCATGAGAAATTGCTTCCTTGGTTGTCTAATCTTTCAAGTTCATAACAACTCAATATGTGTATCA TTCTATGTATCCTTTCATTTTTATTGGTCAGTAAATATAAACCTAATTTATATTTTAACCAATGAAAAACAAATGATACAAACTTTGAGACAAATGCTGT GGCTCCCAGCACAACTCACTTATACATCAACCACTTGTTGAAAGTTGAAACCTTTCACAGTATCATTTTATTTGTATTCATTTACATTGCCAACTGTCTT GTAAAATAGATCACAAAATCAACCAAAATGCTTGAGATTAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172850; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343636
| Blastp | Pheophytinase, chloroplastic from Arabidopsis with 25.24% of identity |
|---|---|
| Blastx | Uncharacterized hydrolase YugF from Bacillus with 27.1% of identity |
| Eggnog | Alpha beta hydrolase(COG0596) |
| Kegg | Link to kegg annotations (AT5G13800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428650.1) |
| Pfam | alpha/beta hydrolase fold (PF00561.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |