Ll_transcript_342728

• Id Trinity: TRINITY_DN49868_c3_g1_i2
• Name Transcript: Ll_transcript_342728
• Sequence: AAAAACAATAAGGCAGGTTGTTCCAACTGTCTGAGCTGCAATTTTGTTTGTCCAAAACAATATTCCCTTCTCACTTTTCATTTCCCACTTCATCTCCACA CATCTTTCTCTCTCTTCCATTTTCAACTCTTTTCTATTCACCTAATCTCTCTCTCTCTCTAGATTCTCTCCGATTCTTTCTTCTTCTTCATAACCGTTTC AATGGATCCCGAACTCGACCAAAACGACACCGTTTCTACTCGCCGTACTCCTTTACACTTACCTTCTTCCTCTTCCGACGAAGACTCTAACGACACCGTT TCGCCCTCCAATTCCATCCACTCCACCAACCGCCGTCTCGACTGTATGCTCCAATTCCTCGACCGCAAACTATCCTACGACCACAACCACCGCCTCATTC CCCGTCCCGGCTCCTTGCCGGAGTTCATCGCCAAGGGCGGCGCCGCCGGCATCTTCAAACTCCCACCTCGAGGTGCCGTGCACCCTGCGCGGCCTCCGGG ACTTGAATTGCGGCCTCATCCGCTGAGGGAAACTCAGATTGGACGGTTTCTGAGGAACATTGTTGGAACTGAGTCTCAATTGTGGGCTGCGACTGAGTGC GGTGTTAGGTTATGGAATTTCAAGGATCTGTATGCGTCGTGGTGTAATGGTGTTGGAGGAGAAGAGAGTGGTTTTAGGATTGGGGATGAAGAGACGGCGC CGTTTTGGGAATCGGTGTGGACTTCACCTGCGCTGTGTTTGGTTTCCGATGAGGGGAATAGATTGATGTGGAGTGGTCATAAAGACGGAAAGATTAGGTG CTGGCAGATGGATGATCGGACTTTGGATGATAAGAACTGGAGGACTCACTTCAAGGAAAGCTTGTCTTGGCAGGCTCACCGTGGGCCTGTTCTTTCCCTT ACTTTCACCTCTCACGGGGATCTATGGTCGGGTTCCGAAGGAGGAGCTATAAAGATATGGCCTTGGGAGTCTATTGAGAAATCTATTCACTTGACAAAGG AGGAAAGGCACACAGCTGTGATATCGGTGGAGAGGTCTTATGTTGACTTGAGGAGCCAGCTGTCTACAAATGGCTTCAACAACATGCTCACTTCAGATAT AAAGTACTTAGCATCTGATAATTCAAGAGCAAAAGTATGGAGTGCTGGCTATTTTTTCTTTGCTTTGTGGGATGCTCGTACAAGGGAGTTACTGAAAGTT TTCAATGCAGATGGCCAGATTGAGAATCGTGCGGACATGACCTCAATCCAAGACTTTTCAGTAGAGTTTACTTTGAATTCTAAGAAAGACAAAACACAAA GTGCCGTTGGCTTTTTTCAGCGCTCACGTAATGCCATAATCGGGGCAGCAGATGCTGTTCGTCGAGTTGCAGCGAAGGGGGGCTTTGGGGATGATAATCG GAGAACTGAAGCACTGATTGTAACAATAGATGGAATGATTTGGACTGGGCATTCAAGTGGCTCACTGGTTAAGTGGGATGGAAATGGCAATCGGATACAA GATTTTATTTACCATCCATTTGCTGTTCAATGTTTTTGTACTTTTGGCATGCGAATTTGGGTAGGTTATGTAACTGGTACTGTCCAGGTTTTGGACCTCA ATGGTAATCTGATTGGGGGATGGGTGGCTCATAACAGTCCAATTGTAAAAATGACAGTTGGAGCTGGTTACATGTTCGCATTGGCCAACCATGGTGGCAT ACGTGGATGGAACATCACCTCCCCAGGACCTCTTGATAACATATTACGTTCAGAATTGGGTGGAAAAGAATTTGTATATTCTAAAATAGAAAATATAAAA ATATTGACAGGCACTTGGAATGTTGGACAAGGGAAAGCATCTCAAGATTCCCTTATGACATGGCTAGGTTCTGTGGCCTCAGATGTTGGCCTGGTCGTTG TTGGGTTGCAAGAGGTTGAAATGGGTGCTGGATTTCTTGCAATGTCTGCAGCTAAAGAAACTGTAGGACTAGAGGGAAGTTCTGCTGGGCAGTGGTGGCT GAATATGATAGACAAAACATTGGATGAAGGTTCAACTTTTGAACGTATTGGATCCAGGCAACTTGCGGGCTTGGTCATTGCTGCATGGGTTAAAACCAGC ATTAGATTTCATGTTGGGGATGTTGATGTGGCAGCAGTTCCATGTGGCTTTGGTCGTGCTATTGGCAATAAGGGAGCTGTTGGTTTGAGGATTAGAGTGT ATGATCGGATAATGTGCTTTGTTAATTGTCACTTTGCTGCGCATTTAGAGGCAGTTAGTCGCCGCAATGCTGATTTTGATCATGTATACCGAACAATGTC CTTCAGCCGGCCAACAAACTTCTTAAATGCTGCGGCTGCTAGCACTTCATCTTCTGTTCCAACATTTCGTGTTACAAATTCCGCAGAAGCAATGCCTGAG TTATCTGAGGCAGATATGGTTGTATTTCTTGGTGATTTGAACTATCGCCTTGACGGCATTTCATACGATGAAGCAAGGGATTTTGTTTCTCAAAGGTGTT TTGAATGGCTAAGAGAAAGGGATCAGCTTCGAGCAGAAATGGATACTGGGAATGTCTTCCAAGGAATGCGTGAAGCGATTATCACATTTCCTCCTACATA CAAGTTTGAACGCCATCAAGTTGGTTTAGCAGGGTATGATTCTGGTGAGAAGAAACGTATCCCTGCCTGGTGTGACAGAATTTTGTATCGTGATTCTCGC CCTTCTTTGGTGGCTGACTGCAATTTAGACTGTCCAGTTGTCTCCTCTGTATTGCAGTACGAAGCTTGCATGGATGTCACAGATAGTGATCACAAGCCTG TGCGGTGCATATTTTCTACAGATATTGCCCGAGTAGATGAGTCAACCCGAAGACAGGAGTTTGGAGAGATTCTTCAGTCAAATGAGAAAATTAAATACCT TCTAAGAGGATTATGCAAGATTCCTGACACTATTATTAGTACAAACAACATAATCCTTCAAAACCAGGACACATTAATTCTGCGTATTACAAATAAATGT GCAGAAGACAATGCTCTGTTCGAAATAATTTGTGAAGGCCAGTGTACTGTTATGGAGGATCAGAAGGCATCTAACCATCAATTGAGAGGTTCCTTTGGCT TCCCGAGGTGGCTTGAGGTAAGTCCTGCAACTGGTATAATAAGGCCAGATCATATGGTTGAGGTATCAGTGCATCATGAGGAATTTCAAACCCTAGAAGA GTTTGTTGATGGTGTTGTACAAAACTCTTGGTGTGAAGACTCCAGAGACATGGAAGCTATTTTGGTTGTTAAGGTGCGTGGCAATTGCACTAGTCAGACA AGAGATCACAGAGTCCGTGTTCACCACTGCTATTCAGCCAAGAAAAACCAAACAGAATCTCAACCAAACAACTCCAGTGATATCCAAGCAAGTGTACTAC GCCGATCTGATTTCCAACGTCTCAGCAGTTCTTATGATGTGGTTGACAAGCTACATAATTTGCATTGCCCTTAAAAGGCAGCAGTTGATGTGAGTGCTTG TAACATTTACTTATATATTTTGTGGAAGGATGAAAACTACATAGATTTAGCATCCTGGTTATGCTTGGCACTGTTTTTTTATAGGGAGTTCACAGTCAAA CTTTTAATCATGGAGCTGGTTTTAACTGTATAGAGAAAGCAAATGCAAGGGAAGAATAAGCGAAAGAGCTTTTCTTAGATCCATTATTTGATTTATTCAG AAATGAGTCCAATTTATTGTGTAAATGTCTGTATCATAATACTAAACAATAGAAGCAGCAATTGAATGGGGGAAATGGCTGTGCCTTTGTTGTTACTGCA GCCGAAGCTGAGTATTTTTGAGTTTTTCCTTTTTAGAGAATGGGTAACAAACAGTGATACTTGTTACTCTCATTATTTTGCTTGGAATTTTGTATAATAG AAGTACATTTTAATAGACTTCCTGTTATGTCTGCCTTAGACACTGATGGGTTATTACCAAAACAATATCTGGATTGAGTGATTGGTAAGCTAAAGAACTC TGCCACTGATGGGTATCTTCTCATGCATACCTCCACAAGCACTTCTTTTATGTAAGAATCGAAGTGAAACAACTCTTCAATTACACATGATACCACAAAC AATTCTTATG
• Tissue: pods
• Gene name: LI_gene_172867;
• Additional information: details;

Expression of Ll_transcript_342728

FPKM

• PAB: 4.3
• PNAB: 4.5
• PS1: 5.8
• PS2: 4.4
• PS3: 3.5
• PW1: 4.2
• PW2: 5.1
• PW3: 3.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342728

• Blastp: Type II inositol polyphosphate 5-phosphatase 15 from Arabidopsis with 60.98% of identity
• Blastx: Type II inositol polyphosphate 5-phosphatase 15 from Arabidopsis with 60.98% of identity
• Eggnog: inositol(COG5411)
• Kegg: Link to kegg annotations (AT1G65580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428159.1)
• Pfam: Endonuclease/Exonuclease/phosphatase family (PF03372.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;