Id Trinity | TRINITY_DN49868_c3_g1_i3 |
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Name Transcript | Ll_transcript_342729 |
Sequence | AAAAACAATAAGGCAGGTTGTTCCAACTGTCTGAGCTGCAATTTTGTTTGTCCAAAACAATATTCCCTTCTCACTTTTCATTTCCCACTTCATCTCCACA CATCTTTCTCTCTCTTCCATTTTCAACTCTTTTCTATTCACCTAATCTCTCTCTCTCTCTAGATTCTCTCCGATTCTTTCTTCTTCTTCATAACCGTTTC AATGGATCCCGAACTCGACCAAAACGACACCGTTTCTACTCGCCGTACTCCTTTACACTTACCTTCTTCCTCTTCCGACGAAGACTCTAACGACACCGTT TCGCCCTCCAATTCCATCCACTCCACCAACCGCCGTCTCGACTGTATGCTCCAATTCCTCGACCGCAAACTATCCTACGACCACAACCACCGCCTCATTC CCCGTCCCGGCTCCTTGCCGGAGTTCATCGCCAAGGGCGGCGCCGCCGGCATCTTCAAACTCCCACCTCGAGGTGCCGTGCACCCTGCGCGGCCTCCGGG ACTTGAATTGCGGCCTCATCCGCTGAGGGAAACTCAGATTGGACGGTTTCTGAGGAACATTGTTGGAACTGAGTCTCAATTGTGGGCTGCGACTGAGTGC GGTGTTAGGTTATGGAATTTCAAGGATCTGTATGCGTCGTGGTGTAATGGTGTTGGAGGAGAAGAGAGTGGTTTTAGGATTGGGGATGAAGAGACGGCGC CGTTTTGGGAATCGGTGTGGACTTCACCTGCGCTGTGTTTGGTTTCCGATGAGGGGAATAGATTGATGTGGAGTGGTCATAAAGACGGAAAGATTAGGTG CTGGCAGATGGATGATCGGACTTTGGATGATAAGAACTGGAGGACTCACTTCAAGGAAAGCTTGTCTTGGCAGGCTCACCGTGGGCCTGTTCTTTCCCTT ACTTTCACCTCTCACGGGGATCTATGGTCGGGTTCCGAAGGAGGAGCTATAAAGATATGGCCTTGGGAGTCTATTGAGAAATCTATTCACTTGACAAAGG AGGAAAGGCACACAGCTGTGATATCGGTGGAGAGGTCTTATGTTGACTTGAGGAGCCAGCTGTCTACAAATGGCTTCAACAACATGCTCACTTCAGATAT AAAGTACTTAGCATCTGATAATTCAAGAGCAAAAGTATGGAGTGCTGGCTATTTTTTCTTTGCTTTGTGGGATGCTCGTACAAGGGAGTTACTGAAAGTT TTCAATGCAGATGGCCAGATTGAGAATCGTGCGGACATGACCTCAATCCAAGACTTTTCAGTAGAGTTTACTTTGAATTCTAAGAAAGACAAAACACAAA GTGCCGTTGGCTTTTTTCAGCGCTCACGTAATGCCATAATCGGGGCAGCAGATGCTGTTCGTCGAGTTGCAGCGAAGGGGGGCTTTGGGGATGATAATCG GAGAACTGAAGCACTGATTGTAACAATAGATGGAATGATTTGGACTGGGCATTCAAGTGGCTCACTGGTTAAGTGGGATGGAAATGGCAATCGGATACAA GATTTTATTTACCATCCATTTGCTGTTCAATGTTTTTGTACTTTTGGCATGCGAATTTGGGTAGGTTATGTAACTGGTACTGTCCAGGTTTTGGACCTCA ATGGTAATCTGATTGGGGGATGGGTGGCTCATAACAGTCCAATTGTAAAAATGACAGTTGGAGCTGGTTACATGTTCGCATTGGCCAACCATGGTGGCAT ACGTGGATGGAACATCACCTCCCCAGGACCTCTTGATAACATATTACGTTCAGAATTGGGTGGAAAAGAATTTGTATATTCTAAAATAGAAAATATAAAA ATATTGACAGGCACTTGGAATGTTGGACAAGGGAAAGCATCTCAAGATTCCCTTATGACATGGCTAGGTTCTGTGGCCTCAGATGTTGGCCTGGTCGTTG TTGGGTTGCAAGAGGTTGAAATGGGTGCTGGATTTCTTGCAATGTCTGCAGCTAAAGAAACTGTAGGACTAGAGGGAAGTTCTGCTGGGCAGTGGTGGCT GAATATGATAGACAAAACATTGGATGAAGGTTCAACTTTTGAACGTATTGGATCCAGGCAACTTGCGGGCTTGGTCATTGCTGCATGGGTTAAAACCAGC ATTAGATTTCATGTTGGGGATGTTGATGTGGCAGCAGTTCCATGTGGCTTTGGTCGTGCTATTGGCAATAAGGGAGCTGTTGGTTTGAGGATTAGAGTGT ATGATCGGATAATGTGCTTTGTTAATTGTCACTTTGCTGCGCATTTAGAGGCAGTTAGTCGCCGCAATGCTGATTTTGATCATGTATACCGAACAATGTC CTTCAGCCGGCCAACAAACTTCTTAAATGCTGCGGCTGCTAGCACTTCATCTTCTGTTCCAACATTTCGTGTTACAAATTCCGCAGAAGCAATGCCTGAG TTATCTGAGGCAGATATGGTTGTATTTCTTGGTGATTTGAACTATCGCCTTGACGGCATTTCATACGATGAAGCAAGGGATTTTGTTTCTCAAAGGTGTT TTGAATGGCTAAGAGAAAGGGATCAGCTTCGAGCAGAAATGGATACTGGGAATGTCTTCCAAGGAATGCGTGAAGCGATTATCACATTTCCTCCTACATA CAAGTTTGAACGCCATCAAGTTGGTTTAGCAGGGTATGATTCTGGTGAGAAGAAACGTATCCCTGCCTGGTGTGACAGAATTTTGTATCGTGATTCTCGC CCTTCTTTGGTGGCTGACTGCAATTTAGACTGTCCAGTTGTCTCCTCTGTATTGCAGTACGAAGCTTGCATGGATGTCACAGATAGTGATCACAAGCCTG TGCGGTGCATATTTTCTACAGATATTGCCCGAGTAGATGAGTCAACCCGAAGACAGGAGTTTGGAGAGATTCTTCAGTCAAATGAGAAAATTAAATACCT TCTAAGAGGATTATGCAAGATTCCTGACACTATTATTAGTACAAACAACATAATCCTTCAAAACCAGGACACATTAATTCTGCGTATTACAAATAAATGT GCAGAAGACAATGCTCTGTTCGAAATAATTTGTGAAGGCCAGTGTACTGTTATGGAGGATCAGAAGGCATCTAACCATCAATTGAGAGGTTCCTTTGGCT TCCCGAGGTGGCTTGAGGTGATACTCATTATTTAGAATGAACTTTTTTATGAAATATTTTTATGACAGGTTTTTTAAGCATGTTAATCTTTGTTAGGGGT GTAAAATAAAAGTTAGCTATAAGGCTAGTTGTTCTAGTTGTTATGTTAGAACAACTGTATTGTCAGTTAGTTACTGACTATTTGTAGCAGCACAGTTGAA ATGTAACTTCAGAAATGCATTCCTTGGAAATGTTATAGTCGCTTGTTTGTAGCATTAGTTAGTGACTGTTTATAGCAGTAAGTACATTTCCAAGGAATGC GTGAAGTGACTATAACATTTCCTCCCACTGCTGTACTGTGACAAACAGTCAGTGAGGAATTGACAGTACAGTTATACTAACATATCAACTAGCCTTATAG CTAACTTCTATTATACGTTTCTAACATTATTTTTTCTTTCTATTAGCCTATTCTTCTATTTTAATAAATAAATAAATAAATCAGAAAAAGAAGTAAGGTG GCCACCATGCCAAAGTTTTCTTTTATTGATTAGCATACTTTTTATATATCTTGAATTTGAAGGACACATATTTGATTCAAATAATTAGTGGTTATATTTA GATACCTAAAATTTCAGTTACATTTAACATTTATAGTTTTTAAAGTGACTAAATTAAATTTTTTTTTTCTTACATATACTACAATTATACAATATAGTAT TTATATTAATTAACTAGAAGATACATATTCTACTCATAACTGCATTAATCATAGCACATAACACTGCAATACCCTCTAGATAAAACTGGCTCCAATAATT G BLAST |
Tissue | pods |
Gene name | LI_gene_172867; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342729
Blastp | Type II inositol polyphosphate 5-phosphatase 15 from Arabidopsis with 62.21% of identity |
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Blastx | Type II inositol polyphosphate 5-phosphatase 15 from Arabidopsis with 62.21% of identity |
Eggnog | inositol(COG5411) |
Kegg | Link to kegg annotations (AT1G65580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428159.1) |
Pfam | Endonuclease/Exonuclease/phosphatase family (PF03372.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |