Ll_transcript_342753

• Id Trinity: TRINITY_DN49868_c4_g2_i10
• Name Transcript: Ll_transcript_342753
• Sequence: CAATCCTCCTGGTACAGACTAAACTTAAGAGGTGATTAGTTCATTAGAATAAAGTGGAGGGGTTTATGCACCTAATCAAAAGCTTGCTACAAAAATTATA CAAATGCCCCAATATAACCCCTAACCAAAATCTTGATCCAAAAATTACACAAATACCCCGATTTTAGTTGCACGAAACCTCCTAACCAGTTTGAAAGACG CGGTGTTGACTCAGGAGCAAGCAGGTAGCTATGGCATCATCATCATCATCCGCAGCGGTCTCGCGACTAAACAATCTTAGACGACACTTGGATTCAAATT TGAATGCAATTAAGGTGAAAATAGCTGCTGAGGTTTCTGAAGCTTTATCACTTGGTCGTCCAGTTGTTGCTCTCGAATCTACCATTATTTCTCATGGGAT GCCATATCCTCAAAATTTGGAAACTGCAAAACAGGTAGAAGCTATAGTGAGAGAGAATGGTGCCATTCCTGCAACTATTGCAATTTTGGATGGCACGCCT TGTGTAGGTCTAAGTGTCGAAGAACTTGAGAGGCTAGCTACTCTGGGAACCAAAGCTCAGAAAACAGCTCGAAGGGACATTGCACATGTTGTTGCTAGCA GTGGAAATGGTGCTACTACTGTTTCTGCATCAATGTTTTTGGCTTCTATGGTTGGTATTCCCGTCTTTGTCACTGGGGGGATTGGAGGAGTGCACAGACA TGGGGAACAAACTATGGACATATCATCAGATCTCACTGAACTTGGTAGAACACCAGTAGCAGTCATATGCGCTGGTGTAAAGTCAATATTAGATATTCCC AGGACCCTTGAATATCTGGAAACACAGGGAGTTTGTGTTGCTGCTTACAAGACAAATGAGTTTCCTGCATTTTTCACAGAATCAAGTGGCTGCAAGGTTT GATTTTCCTGAGGCTTTCTTGATAACTTTTAAGTAACAGACAGCAAGTAACATTTTGGTCATCTTTTGCTTTTCTGACCGGTATTGTTGCATTGCATCGT AAGGCGAATCTCTATATTTTAGCCTTATTTTTCTCATCATTAAAATGAAATGGTCATACGTGGAAACATTGTAAAAGCATCCCTCCCCATAGAATTTTAT TTAAATGTAAATGTTGTTCATTTTAATGTCCCCCTTTTAAGTATATGAGTTGAATCTTGATTTATTTTGAAGTATAGATTTCAATTTTTAACTACATAAT TAGAGTTATGACTTTAAAATGTATAATATCTAAATGATTGTAATGTTTTAGCAAGAGAAGTAAACTAAGCTAGTAGGAGAGAAACTAGAGAGAATAGAGA ATTTCAATTTGTCATGATTCAAAGGCCAAAATAATTGATCATGTATCAATTTGGAGGTAGCCTTTCCCGTTTGCAAATTAACATTCATGTCTCCGTCTTT ATCATTTTTATGATAGCATTTTAAGATTTTTTGTTCAAGTTATACACAGATTGGAATGGAAACAGTAGTACTAAGAAACAAGTTTTATTCAGTCTATTAT TTGGTCATGGCATAATTTCCAGGTTTCTTGTCGGGTAGATACACCTGAAGACTGTGCTCGCCTAATAGGCAAGGAAAACATTCCTTTATGTTTTTGCTTC TCAAAAACATTCTATACAATTTCTCTTAATTTTCATTCTTCTAACAGAAGCAAACATCAAACTGAATCTTGGAACTGGAGTTTTGATAGCCGTTCCCATT CCTCGAGAACACTCAACATCTGGACATATTATTGAATCTGCCATTCAAAAAGCCCTTAAAGAAGCTAGGGAAAACAATATAATAGGAAATGCGGAGACTC CGTTTTTGCTTGCTAGAGTAAATGAGCTTACTGGAGGTGCCTCACTTGCTTCAAACATTGCTCTTGTGAAGAATAATGCTCTTGTTGGAGCTAAAATTGC TACAGCCCTTGCTCAGCTAAGAGAACATTGTCCAAGTTGCTAAATAAGTGGAAGATAACCAAATGAAGGTGGTTGTTTTGAAGACGATGACTGTGTTGAT CTGGTGTACATTGAGGGTCTATTTCTGAGTTGATTGTAAGAGAGTAATAAAGGGAAGGGAAAGGCTTAGCAGCCATGAAATACAAGAAAGCTCACAAGCC TTCCCTTTCCGCTCAAATGAACAACTCACAAACTGAGGGATCGGTAAATTGATTAGTGTTAGAAAGATCAATTTCAACAATTGGCAGATGTTTTAAATGG ATTGTGTTGTAAATCCAGGAGGTGATGATGATAAAGATTTTTCAATTCTATTTTTCTTTTCGTTGGATAATAGAATTTTAATTATGTTATTGTTTTTTTT TTACAAATTTCATTTTATTTATTTGGACCATTTACTATTGCATATTTCAACTATGATATTCATGTACCAG
• Tissue: pods
• Gene name: LI_gene_172869;
• Additional information: details;

Expression of Ll_transcript_342753

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.4
• PS2: 0.6
• PS3: 0.7
• PW1: 0.4
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342753

• Blastp: Pseudouridine-5'-phosphate glycosidase from Brevibacillus with 62.63% of identity
• Blastx: Pseudouridine-5'-phosphate glycosidase from Brevibacillus with 62.63% of identity
• Eggnog: hydrolase activity, acting on glycosyl bonds(COG2313)
• Kegg: Link to kegg annotations (BBR47_03720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459236.1)
• Pfam: Indigoidine synthase A like protein (PF04227.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;