| Id Trinity | TRINITY_DN49868_c4_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_342741 |
| Sequence | CGAAGGGACATTGCACATGTTGTGAGTGCTTTTGGCATCAGTTTGTAGGTTGCTAGCAGTGGAAATGGTGCTACTACTGTTTCTGCATCAATGTTTTTGG CTTCTATGGTTGGTATTCCCGTCTTTGTCACTGGGGGGATTGGAGGAGTGCACAGACATGGGGAACAAACTATGGACATATCATCAGATCTCACTGAACT TGGTAGAACACCAGTAGCAGTCATATGCGCTGGTGTAAAGTCAATATTAGATATTCCCAGGACCCTTGAATATCTGGAAACACAGGGAGTTTGTGTTGCT GCTTACAAGACAAATGAGTTTCCTGCATTTTTCACAGAATCAAGTGGCTGCAAGGTTTCTTGTCGGGTAGATACACCTGAAGACTGTGCTCGCCTAATAG AAGCAAACATCAAACTGAATCTTGGAACTGGAGTTTTGATAGCCGTTCCCATTCCTCGAGAACACTCAACATCTGGACATATTATTGAATCTGCCATTCA AAAAGCCCTTAAAGAAGCTAGGGAAAACAATATAATAGGAAATGCGGAGACTCCGTTTTTGCTTGCTAGAGTAAATGAGCTTACTGGAGGTGCCTCACTT GCTTCAAACATTGCTCTTGTGAAGAATAATGCTCTTGTTGGAGCTAAAATTGCTACAGCCCTTGCTCAGCTAAGAGAACATTGTCCAAGGTGAGCTTATA TGAATGTAACTGATCCCATCTCTGTTACTGCTGATCTGTTGAACTGTGATGCCCAAAAAGTTTCCTTGGTTCAACTGTCAATTGCGATTATATGTCAGCT TCTTCTCTATGCAAGTTAGATATTCTTTGGAGAATAAAATTTCTCCTCATATCAGAAGATAACTTATCTCCTTAAATCCACTTATTTTTGACATGTGTCT TATTTTTTTCTTTTTATGACATGTGTCTTATTTGTTTTTCTTTTTATAATAATATCATACAAAATAAGACATGTATCAAACAATGAGTGGATTTAAGGAG ATAAATTATCTTTGTATGAGGAGTGATAGGATTAGGCCTAATCCTATCAAGGAGACAATTTATTTTCTTTTCTTTAATATGATATGTAATGTAAAATTTA TGTCTTTATACATTCCAAAGTAACATGTGTGGGAAACTACTGAATATACTTGAGATAGGTCCCTATAGAAACAGATTTTATCTCACATAAAACTGATTTA ATTTTGGCTTGCCAAGTATAAGTTTTTCACAGTCATTCTTTTTTTACATAGTATAAAAAACTTTACAAACAAGCATGAGGTGAATCAAAGTGCTTTATTT ACTAAAAGTCACCGCATTTGTTAAGTTTATCTATGGTTTGCACATGTTATTGTTCTCTCATCCTTTGCATAGTAGTATATAGCTCAGTTGTCTGACCCTT CTAGTGTGTTCTTGCTAGTTGCTAAATAAGTGGAAGATAACCAAATGAAGGTGGTTGTTTTGAAGACGATGACTGTGTTGATCTGGTGTACATTGAGGGT CTATTTCTGAGTTGATTGTAAGAGAGTAATAAAGGGAAGGGAAAGGCTTAGCAGCCATGAAATACAAGAAAGCTCACAAGCCTTCCCTTTCCGCTCAAAT GAACAACTCACAAACTGAGGGATCGGTAAATTGATTAGTGTTAGAAAGATCAATTTCAACAATTGGCAGATGTTTTAAATGGATTGTGTTGTAAATCCAG GAGGTGATGATGATAAAGATTTTTCAATTCTATTTTTCTTTTCGTTGGATAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_172869; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342741
| Blastp | Pseudouridine-5'-phosphate glycosidase from Brevibacillus with 57.51% of identity |
|---|---|
| Blastx | Pseudouridine-5'-phosphate glycosidase from Brevibacillus with 55.16% of identity |
| Eggnog | hydrolase activity, acting on glycosyl bonds(COG2313) |
| Kegg | Link to kegg annotations (BBR47_03720) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459235.1) |
| Pfam | Indigoidine synthase A like protein (PF04227.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |