Ll_transcript_341398

• Id Trinity: TRINITY_DN49873_c0_g2_i3
• Name Transcript: Ll_transcript_341398
• Sequence: TGAAATCTTATTAGGGTTTGGGTTAGGATAAAGAATCGCAAGGTTAACCATGTCTTCTTCGTTGAAAGACGCAGACCCCAACCTGGGTTACCTTACCCGC AAGGACACGGAGGTGAAACTTCCCCGTCCGACGAGGGTCAAAAACAAAACCCCCGCACCTGTTCAAATCACGGCGGAGCAGATTCTCCGGGAAGCTCGTG AGCGTCAAGAGGCTGAGATTCGCCCTCCGAAGCAGAAGATCACTGACCCCACCGAGCTCGGCGAGTATCGCCTCCGTAAGCGTAAGGAGTTTGAAGACTT AATCCGCCGCGTTCGATGGAACGTTGGTGTTTGGATCAAGTATGCACAGTGGGAAGAGTCACAGAAGGATTTCAAACGCGCTCGCTCCATTTGGGAACGA GCTCTGGAGGTTGATTACAAGAACCATACCTTGTGGCTCAAGTATGCTGAGGTTGAGATGAAGAACAAGTTCATTAATCATGCTAGGAATGTGTGGGACC GAGCGGTTACCCTTTTGCCTCGGGTTGATCAGTTATGGTATAAGTACATTCACATGGAGGAGATGCTCGGCAATGTGGCCGGTGCGCGGCAAGTTTTCGA GAGATGGATGAAGTGGATGCCTGATCAGCAGGGGTGGTTGTCTTATATCAAGTTTGAACTTAGGTATAATGAGGTTGAGCGTGCTAGAGGGATATTCGAG CGATTTGTGCAGTGCCATCCTCGTGTTGGAGCTTGGATTCGTTATGCTAAGTTTGAGATGAAGAATGGTGAGGTTGTTAAGGCGAGGAATGTTTATGAGA AAGCGTTGGAGAAGCTCGCTGATGATGAGGAAGCAGAGCAATTATTTGTTGCCTTTGCTGAGTTTGAGGAAAGGTGTAAGGAGACGGAGCGTGCAAGGGC TATATACAAATTTGCCCTTGATCATATTCCCAAGGGGAGGGCAGAAGATTTGTATCGTAAATTTGTGGCGTTTGAGAAGCAATATGGAGACAGGGAAGGG ATTGAGGATGCTATTGTTGGGAAGAGAAGGTTTCAGTATGAGGATGAAGTGGGAAAAAGTCCAACGAATTATGATTCATGGTTTGACTATATAAGATTGG AAGAGAGCGTGGGAAATAAAGAAAGAGTAAGGGAGGTTTATGAGAGAGCTATAGCCAATATTCCTCCGGCTCAGGAGAAGCGGTTATGGCAACGCTATAT TTATTTGTGGATTAATTATGCACTATATGAAGAGCTTGATGCTGGAGACATGGAGCGAACAAGAGATGTATACAGGGAGTGTCTGAGTCTGATACCTCAC CAGAAGTTTTCATTTGCAAAAATATGGTTACTTGCAGCCCAATTTGAAATACGCCAGCTGAATCTCAAGGCTGCCCGTCAAATATTAGGAAATGCCATTG GGAAAGCTCCTAAAGATAAGATTTTTAAGAAGTATATAGAGATAGAACTGCAGCTTGGTAATATAGATCGATGTAGAAAACTGTATGAAAAGCATCTTGA GTGGTCGCCTGAAAATTGCTATGCTTGGAGCAAGTATGCAGAATTAGAGAGATCTTTAGCTGAGACGGGTCGAGCTAGAGCAATATTTGAAGTTGCAATC GCCCAACCAGCATTGGACATGCCTGAGCTATTGTGGAAGGTACATGTAAAATTTATTTCTCATCCAGGTCAATGCCCATTTGAGATTTCAGTATACATGT AGAGCATGCATAACAAATGACATTGGGGCTAGCTTTAATGACCTCGAACCCTTATTACGAGACTACTGGTCTTTTCTAGGCCTAATTAACTTTTGAATAC ATTGAAGATTAAGAAAATATTGTGGAATACATTGAAGATTAACTTATGGAATACAAGCTGTTTCGTTGTTGGCCTTTCATTAGATATCATACTGCTGAGA TGGTTAGAGTAGGTCAGGGGATAAACAAGAAGATTAAGAAAACATTTTCTCTTATATAACACTATGAAGTTCCTTATAGATTATATATTGTAATGAATTT CCTTGCTTTAAAAAATGTAATAATAGTTCCTTTTATTTTTACTGGTACTTTTGTTACATGCAATAGGAGTTAGTGGAAAGTATTGTTGCCATAGAAAACG ATGTATGAGTATTTGGTGAGAAAACAGATATAAGCTTACTACAGAAAAAACATGAAAAACTAGTTCTGCCTTGGTGTAGCAGCCTCTGGCTTTCATCACT ATTTTTTCTCTTTTATCATTCCTTCTCTCTCTTTTTGGTCGTCTTCTAATGCATACCTTGTCTAGAATAAGTACATATGTATTGGTCAAC
• Tissue: pods
• Gene name: LI_gene_172902;
• Additional information: details;

Expression of Ll_transcript_341398

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341398

• Blastp: Crooked neck-like protein 1 from Rattus with 65.18% of identity
• Blastx: Crooked neck-like protein 1 from Rattus with 64.98% of identity
• Eggnog: crooked neck pre-mRNA splicing factor-like 1 (Drosophila)(ENOG410XQJF)
• Kegg: Link to kegg annotations (100910202)
• CantataDB: -
• Mirbase: ath-MIR5641 (MI0019214)
• Ncbi protein: Link to NCBI protein (XP_019420965.1)
• Pfam: HAT (Half-A-TPR) repeat (PF02184.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;