| Id Trinity | TRINITY_DN49879_c0_g7_i1 |
|---|---|
| Name Transcript | Ll_transcript_341781 |
| Sequence | GGTTCTGTCTGAAACTCAGCAAAGCAATGAGGTGGTCGTGACTGACACACAACCCGACAATGAGGCCAACATGCCTGAAACACAGGCATTTGATGATGTA GTCATGTCTGAAGCTATTCCAGAAAATGAGTTGGCGAATCCCACAACAGATCACAATAATCAGCTCTCCCATTCTGAAACTTTTCCTGATAACCAGTTCA CAAATTTCCATATGATTCCTGAAGATCAGCTGCCTCAACCTGAATCACTGCCCCATTCCGAACCACCGCCCAATTCTGATCCACTTACAGATAATCATCT AACAGACATCAAACCAATTCATCATAATCATCAACCCCAGTATGTAACAGTAACTGGCAATCATCTGAACCATTCCGAGGCATTTTCGAACAATCATCTA AACAACTCTGAAGCTTTGTCCCATGATCAACTAGCCAATTCCCAAATATTGACTCACTATGAGCTGGGAAATAATGATACAATGAACAATAGTCAGCTAG TCAATTCTCAAGAAAACTATGAGCTAGCCATTTCCAATGCCCTTCCCAGCTATGAGATTATAAACGCTGAGGCACCGCTGAACACTGAGGAACGTACCCC AGAAACACAGCCAAGCAAGCGGAGGAAAAAGAAGTCTGTAGTATGGGAACACTTCACAATAGAAACAATCAATCCTGGATGCAGAAGAGCTCGCTGCAAT CAATGTTCACAAACTTTTGCATATAGTACAGGTTCAAAAGTTGCAGGCACCAGCCACCTCAAGCGCCACATTGCCAGGGGGACCTGCTCAACTCTTCTAC ATAACCAGGAGCATAATCAATCAAACCCATACACTCCACGTTCTAGAGGAAGTGGAACTGTCAATGCTAGTGACCGACCAAAGCGACGTTATAGATCCCC TAACACTCCTTACATCATTTTTGATCAAGATCATTGCCGCAATGAAATTGCTAGGATGATCATTATGCATGACTACCCCCTTCACATGGTTGAGCACCCA GGATTTGTTGCATTTGTCCAAAATCTCCAGCCCCAGTTTAAAATGGTGACCTTCAACACTATCCAGGGGGATTGTATTGCAACTTACTTGATGGAAAAGC AAAACCTTTTGAAGTATTTTGAGGGATTACCAGGACGTGTTTGTCTGACACTGGACACGTGGACATCAAATCAATCTTTAGGTTATGTATTTATTACAGG ACATTTTGTAGATAATGATTGGAAGTTGCAGCGGAGAACTCTCAATGTTGTTATGGAACCATACCCAGATTCTGACTCCGCACTCAGTCATTCTGTAGCT GCATGTCTTTCTGACTGGGGTTTGGAGAGTAGGCTGTTTTCTGTTACTTGTAATCAGACAATGAATGCTGTTGCTCTTGAAAATCTCAGACCATTACTCT CTGTCAAGAATCCACATATCCTCAATGGTCAATTGCTAGTTGGTAATTGCATTGCCCGTACTTTAAGCAGCGTTGCAAAGGATTTATTGGGCTCTGTACA AGACATAGTTAATAAAGTCCGGGATAGTGTAAAATATGTGAAGACTTCTCATTCTCATGAGGATAAATTCCTGCAGCTCAAGCAGCAACTTCAGGTCCCC AGTGAAAGGAGTCTTTTTATTGATGACCAAACCCAATGGAATACAACATATCGAATGCTGGTGGCAGCTTCTGAGCTAAAGGAAGTGTTTTCTTGTTTGG ACACTTCTGATCCTGATTATAAGGGAGCCCCATCTATGGAAGACTGGAAGCTGGTTGAGACCCTCTGCATATACTTGAAGCCTCTTTTTGATGCAGCAAA CATTCTTACAACTACAACCCATCCCACGGCTATTACCTTCTTCCATGAAGTTTGGAAATGGCAGATGGATCTGGGTCGTTCCGGTCTAAATGAGGATCCC TTCACTAGCAAACTTACTAAATCTATGCAAGAAAAGATTGATAAGTACTGGAGGGATTGTAGTTTGGTTTTGGCGCTTGCAGTAGTTATGGATCCTCGTT TCAAGATGAAGCTTGTTGAGTTCAGTTTCACAAAAATCTATGGCGAGGATGCTCATGTGTATGTCAAGATCGTTGAAAATGGAATTCATGAGCTGTTTCA TGAGTATGTGGCCCTTCCCCTGCCACTAACACCAACTTATGCAGAAGAAGGGAATGGTGAAAGCCATATCAAGACAGATGGATCTCCAGGAGGAATTCTG TTGTCAGATAATGGTCTCACAGATTTTGATGCCTACATTATGGAAACTAGTAGCCAGCTGATGAAGTCTGAATTGGACCAATATCTTGAAGAGTCACTGC TGCCACGTGTTCCCGACTTCGACGTACTAGGTTGGTGGAAGCTAAACAAACCCAAGTACCCTACTCTTTCCAAGATGGCCAGGGATATATTGTCCGTTCC AGTTTCTACTGTTCCTTCCGACTCTGTCTTTGACACAAAAGGCAAAAGGATGGATCAGTATCGCAGTTCCTTGCGACCAGAGACAGTGGAGGCCCTTGTC TGTGCCAAGGATTGGATGCAGTATGGAGCAGCTGAAGCTTCCAATGGACTTGTGAAGATGGACTTTTAGATTTTAGGCGGTTGTACTGTGTATGATGCTA GATTCTCTGGTATTTTACTTTTAGTTCTTAGGGAATATTTGGATTATTCTGGAGCTTCAAATGATTGGATTGGGGGTGGTTTTGCCCCATCAGGAATTCT CTTAATCTTGAGGCTTGTTGCATATTCAGTTTGTCTTGTTCATCTTAAAATGAATATATACCATTTATCATTTAAAACATAACTTAAACTTATGAATATA TGTCATCTATTCTGCTTTTTCACTTCTTCTGCTTAATATATTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_172956; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_341781
| Blastp | Zinc finger BED domain-containing protein DAYSLEEPER from Arabidopsis with 62.73% of identity |
|---|---|
| Blastx | Zinc finger BED domain-containing protein DAYSLEEPER from Arabidopsis with 62.73% of identity |
| Eggnog | zinc finger(ENOG41115TD) |
| Kegg | Link to kegg annotations (AT3G42170) |
| CantataDB | Link to cantataDB annotations (CNT0000436) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423508.1) |
| Pfam | BED zinc finger (PF02892.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |