Ll_transcript_341784

• Id Trinity: TRINITY_DN49879_c0_g7_i2
• Name Transcript: Ll_transcript_341784
• Sequence: AAAAAAGAATAAATAATAATGATGGACCTGTTAAGAGTCCAAAAAAAAAGGTTGACCTATTTTAAATGTTGATAGAAACCCTATTCCGTGAACCAGTACG ATACCGAAGCATCAACCCTAGAAATCGAAGGTCCAATTAGCTTATCGGGTTCGTTCCTAAGCCCAATCGAGTTCTCTCTCCGTTCAGCCCTCACTCTCTC TTCTGCAAAACCCAATCGAGTTCCGGTAACGGCGCCGTCGCCTCCTCAGATTCCGTTTACACACCTGGAAGAAACATATCAAGACATGATGGCCACCCTT GAAGAAGTCATAGTTGTGGTGACCCCTGATGTGAAAAATAATAATAATCTTGATAAGGTGGTTGCTTCTGAAAGGCAGCGCACCAACGATGTGGTTGTTT CGGAAACACAGCACAACAGCGAGGTGGTAGTTGTTTCTGAAACACAGAACAATAGTGAGATCATTGTTTTTGAAAGACAGCACAATGATGAGGTGGTTGT TTCTGAGGCACAGCTAAGCAATGCCGTGGTTTTGGCTGAAACGCCGCAAAGCAATGGCATGATCATTCCTGAAAGAGAGCCGGGCAATGAAGTGGCCATG TCTGACACACAACTCGGCAATGAGGCTGTCATGAATGGTGGTCAAACCGGCAGTGATGTGGTCATGTATGATGCTCTATCTGAAAATGAGTTGGTCAATC CTACAACAGATCATAACAGTCAGCTTTCTAATCCAGAAAATCTTCCGGATAATCATCATTTCACTATTCTTGACATGATTCCTGAAGATCAGCTGCCTCA ACCTGAATCGCTGCCCAATTTTGAACCACTGCCATGTTCTGAACCACCGGCGGACAGTCATCTCGCAGACATCAAACCAATACCTCACAATCATCTGTCC CAGTATGATATGCCGCCTAGCAATCACCTGGGCCACTCTGAGGCTCTGGCCAATCATCAATTAGCAAACCCTGAAACATTTTCCCATGATCAGCTTGCAG ATTCCCAAATGTTGTCAAATGATGAAACAATGCACAACCATCAGCTAGCCATTTCTCAACCACACTATGAGATAGTCAGTGCCAACACCCTTACCAGTTA TGAGATAGTAAATGCTGAAATTCCTCTGGATACTGAGGAACATAACCCAGAAACACAGCCAACCAAGAAGAGGAAAAAGAAGTCTATAGTCTGGGAACAC TTCACCCTACAAACAGTTAGTCCTGGATGTCGAAGGGCATGCTGCAATCAATGCAAGCAAAGTTTTGCCTACAGTACTGGTTCAAAAGTTGCTGGAACCA GCCACCTTAAACGCCATATTGCCAAGGGGGCATGCCCAACTCTTTTGCGTAACCAGGATCAGAATCAGTTGACCCCATATACTCCAGGTTCAAGAGGAAG TGGTGCTGGCAATGCTAGCAATACACCAAAGCGACGCTATAGATCCCCTAGTACTCCTTACATCACATTTGATCAAGATCGTTGTCGCCGTGATATTGCC AGGATGATCATTATGCATGATTACCCCCTTCACATGGTTGAGCATCCAGGGTTTGTTGCATTTGTCCAAAATCTGCAGCCCCAGCTGAACATGGTGACCT TTAACAGTGTTCAAGGGGACTGTGTTGCAACTTACCTGATGGAAAAACAAAACCTTACTAAGTATTTTGAAGGATTACCGGGACGTGTTTGTCTAACACT GGATATCTGGACCTCAAGTCAATCTGTGGGGTATGTATTTATTACAGGACATTTTGTCGATGGTGATTGGAAGTTGCAGAGGAGAATTCTCAATGTTGTG ATGGAACCATACCCTGATTCTGACTCTGCTATCAGTCATGCTGTAGATGCTTGCCTTTCCGATTGGAATTTGGATGGCAGGCTGTTTTCTATCACTTGTA GTCAGGCATTGAGTGCAGTTGCCCATGAAAATCTAAGACCTCTACTCTCTGTGAAGAATTCACTTATCCTCAATGGTCAGTTGCTTGTTGGAAATTGCAT TGCCCATACTATAAGATATGTTGCAAATGATTTGTTGAGCTCAGCACAAGGCACCGTCAATAAAATTCGGGATAGTGTAAAATATGTGAAGACTTCTCAT TCTCATGAGGATAAATTCCTGCAGCTCAAGCAGCAACTTCAGGTCCCCAGTGAAAGGAGTCTTTTTATTGATGACCAAACCCAATGGAATACAACATATC GAATGCTGGTGGCAGCTTCTGAGCTAAAGGAAGTGTTTTCTTGTTTGGACACTTCTGATCCTGATTATAAGGGAGCCCCATCTATGGAAGACTGGAAGCT GGTTGAGACCCTCTGCATATACTTGAAGCCTCTTTTTGATGCAGCAAACATTCTTACAACTACAACCCATCCCACGGCTATTACCTTCTTCCATGAAGTT TGGAAATGGCAGATGGATCTGGGTCGTTCCGGTCTAAATGAGGATCCCTTCACTAGCAAACTTACTAAATCTATGCAAGAAAAGATTGATAAGTACTGGA GGGATTGTAGTTTGGTTTTGGCGCTTGCAGTAGTTATGGATCCTCGTTTCAAGATGAAGCTTGTTGAGTTCAGTTTCACAAAAATCTATGGCGAGGATGC TCATGTGTATGTCAAGATCGTTGAAAATGGAATTCATGAGCTGTTTCATGAGTATGTGGCCCTTCCCCTGCCACTAACACCAACTTATGCAGAAGAAGGG AATGGTGAAAGCCATATCAAGACAGATGGATCTCCAGGAGGAATTCTGTTGTCAGATAATGGTCTCACAGATTTTGATGCCTACATTATGGAAACTAGTA GCCAGCTGATGAAGTCTGAATTGGACCAATATCTTGAAGAGTCACTGCTGCCACGTGTTCCCGACTTCGACGTACTAGGTTGGTGGAAGCTAAACAAACC CAAGTACCCTACTCTTTCCAAGATGGCCAGGGATATATTGTCCGTTCCAGTTTCTACTGTTCCTTCCGACTCTGTCTTTGACACAAAAGGCAAAAGGATG GATCAGTATCGCAGTTCCTTGCGACCAGAGACAGTGGAGGCCCTTGTCTGTGCCAAGGATTGGATGCAGTATGGAGCAGCTGAAGCTTCCAATGGACTTG TGAAGATGGACTTTTAGATTTTAGGCGGTTGTACTGTGTATGATGCTAGATTCTCTGGTATTTTACTTTTAGTTCTTAGGGAATATTTGGATTATTCTGG AGCTTCAAATGATTGGATTGGGGGTGGTTTTGCCCCATCAGGAATTCTCTTAATCTTGAGGCTTGTTGCATATTCAGTTTGTCTTGTTCATCTTAAAATG AATATATACCATTTATCATTTAAAACATAACTTAAACTTATGAATATATGTCATCTATTCTGCTTTTTCACTTCTTCTGCTTAATATATTT
• Tissue: pods
• Gene name: LI_gene_172956;
• Additional information: details;

Expression of Ll_transcript_341784

FPKM

• PAB: 1.4
• PNAB: 1.8
• PS1: 2.8
• PS2: 2.5
• PS3: 3
• PW1: 1.5
• PW2: 1.7
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341784

• Blastp: Zinc finger BED domain-containing protein DAYSLEEPER from Arabidopsis with 61.14% of identity
• Blastx: Zinc finger BED domain-containing protein DAYSLEEPER from Arabidopsis with 59.27% of identity
• Eggnog: zinc finger(ENOG41115TD)
• Kegg: Link to kegg annotations (AT3G42170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452679.1)
• Pfam: Domain of unknown function (DUF4413) (PF14372.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;