Ll_transcript_341785

• Id Trinity: TRINITY_DN49879_c0_g7_i3
• Name Transcript: Ll_transcript_341785
• Sequence: GCAATGAGGTGTTTGTTTCTGAACCTCAGCAAAGCAATGAGGTGGTTCTGTCTGAAACTCAGCAAATCAATGAGGTGGTTGTTTCCGATACTCAGCACAG TAATGAGGTGGTTGTTTCTGAAACTCAGCAAAGCAATGAGGTATCCATGTCTGAAGCTCAGCCCAGTGATGAGGCAGTCATGTCTGAAACTCAGCCCACC GATGAGGTTGTTATGTCCGAAACTCAGCCTACTAATGAGGTGGTTGTGTCTGAAACTCAGCCCACTGATGAGGTGGTTGTGTCTGAAACTCAGCTAAGTA ATGAGGTGGTTGTTTCTGAAAGTCATCAGAACGATGAGATGGTCGTTTCTGAAGCTCATCAAACCAGTGGTGAGGTGGTTGTTTCTGAAACTCAAACCAG CAATGAGGTGCCTGTGTCTGAATTTCAGCCCAACAATGAGGTGCCTGTGTCTGAATTTCAGCCCAACAATGAGGTGGTTGTGTCTAAAATTCAGCCCAGC AATGAGGTAGATGTGTCTGACATTCAACAAAACAATGAGGTGGCCACCGAGCCCAGAAATGAGGTGGTCATGTCTGACACACAGCCGAACGATGAGGCCA ACATGCCTGAAACACAAACCTGTGATGATCTGGTCATGTCTGAAGCTATTCCAGAAAATGAGTTGGCCAATTCTACAACGGATCCCAACAACCAGCTCTC CCATTCTGAAACTCTTCATGATAATCAGTTCACGAATTTCCATATGATTCCTGAAGATCAGCTGCCTCAACTTGAATCACTACCTCATTCAGAGCCTCCA CCCAGTTCTGAGCTACCTACAGATGATCATCTAACTGACATAAAACCGTTGCCTCATAATCATCTACCCCATTATGAAATAGTGCCCAACAATCATCAAA CATCTCATAATCATCTTCCCCATTATGAGACAGTGCCAAACAATCATCTGAACCATTCTGAGGCATTTTCAAACAATCATCTATCTAACTATGAAGCTTT GTCCCATGATCAAATTGGCAACTCTGAAATGTTCACTCATTATGAGCTGGAAAATAATGAAACTATGCACAACAATCAACTACCCAATTCTCATGGACAA TATGAGCTAGCCGTTTCTAATGCCCTGCCAAGCTATGAGATTATAAATGCTGAGACACCACTGAACACTGAGGAACGTACCCCAGAAACACAGCCAAGCA AGCGAAGGAAAAAGAAGTCTATAGTCTGGGAACACTTCTCAATAGAGGCAATCAGTCCTGGATGTAGAAGGGCACGGTGCAATCAATGTCGACAAACTTT TGCCTATAGTACAGGTTCAAAAGTTGCTGGCACCAGCCACCTCAAACGCCATGTTGCTAAGGGAACCTGCTCAGCTATTCTGCGTAGCCAGGATAATCAG CTGAACTCATACACTCCACGTTCTAGGGGAAGTGGGGCTGGCAACACTACTGATCCACCAAAGCGGCGTTATAGATCCCCTAGCACTCCTTATGTCATTT TTGATCAAGATCATTGCCGTCATGAGATTGCTAGGATGATCATTATGCATGATTACCCTCTTCACATGGTTGAGCATCCAGGATTTGTTGCATTTGTCCA AAATCTCCAGCCCCAGTTTAAAATGGTGACCTTCAACACTATCCAGGGGGATTGTATTGCAACTTACTTGATGGAAAAGCAAAACCTTTTGAAGTATTTT GAGGGATTACCAGGACGTGTTTGTCTGACACTGGACACGTGGACATCAAATCAATCTTTAGGTTATGTATTTATTACAGGACATTTTGTAGATAATGATT GGAAGTTGCAGCGGAGAACTCTCAATGTTGTTATGGAACCATACCCAGATTCTGACTCCGCACTCAGTCATTCTGTAGCTGCATGTCTTTCTGACTGGGG TTTGGAGAGTAGGCTGTTTTCTGTTACTTGTAATCAGACAATGAATGCTGTTGCTCTTGAAAATCTCAGACCATTACTCTCTGTCAAGAATCCACATATC CTCAATGGTCAATTGCTAGTTGGTAATTGCATTGCCCGTACTTTAAGCAGCGTTGCAAAGGATTTATTGGGCTCTGTACAAGACATAGTTAATAAAGTCC GGGATAGTGTAAAATATGTGAAGACTTCTCATTCTCATGAGGATAAATTCCTGCAGCTCAAGCAGCAACTTCAGGTCCCCAGTGAAAGGAGTCTTTTTAT TGATGACCAAACCCAATGGAATACAACATATCGAATGCTGGTGGCAGCTTCTGAGCTAAAGGAAGTGTTTTCTTGTTTGGACACTTCTGATCCTGATTAT AAGGGAGCCCCATCTATGGAAGACTGGAAGCTGGTTGAGACCCTCTGCATATACTTGAAGCCTCTTTTTGATGCAGCAAACATTCTTACAACTACAACCC ATCCCACGGCTATTACCTTCTTCCATGAAGTTTGGAAATGGCAGATGGATCTGGGTCGTTCCGGTCTAAATGAGGATCCCTTCACTAGCAAACTTACTAA ATCTATGCAAGAAAAGATTGATAAGTACTGGAGGGATTGTAGTTTGGTTTTGGCGCTTGCAGTAGTTATGGATCCTCGTTTCAAGATGAAGCTTGTTGAG TTCAGTTTCACAAAAATCTATGGCGAGGATGCTCATGTGTATGTCAAGATCGTTGAAAATGGAATTCATGAGCTGTTTCATGAGTATGTGGCCCTTCCCC TGCCACTAACACCAACTTATGCAGAAGAAGGGAATGGTGAAAGCCATATCAAGACAGATGGATCTCCAGGAGGAATTCTGTTGTCAGATAATGGTCTCAC AGATTTTGATGCCTACATTATGGAAACTAGTAGCCAGCTGATGAAGTCTGAATTGGACCAATATCTTGAAGAGTCACTGCTGCCACGTGTTCCCGACTTC GACGTACTAGGTTGGTGGAAGCTAAACAAACCCAAGTACCCTACTCTTTCCAAGATGGCCAGGGATATATTGTCCGTTCCAGTTTCTACTGTTCCTTCCG ACTCTGTCTTTGACACAAAAGGCAAAAGGATGGATCAGTATCGCAGTTCCTTGCGACCAGAGACAGTGGAGGCCCTTGTCTGTGCCAAGGATTGGATGCA GTATGGAGCAGCTGAAGCTTCCAATGGACTTGTGAAGATGGACTTTTAGATTTTAGGCGGTTGTACTGTGTATGATGCTAGATTCTCTGGTATTTTACTT TTAGTTCTTAGGGAATATTTGGATTATTCTGGAGCTTCAAATGATTGGATTGGGGGTGGTTTTGCCCCATCAGGAATTCTCTTAATCTTGAGGCTTGTTG CATATTCAGTTTGTCTTGTTCATCTTAAAATGAATATATACCATTTATCATTTAAAACATAACTTAAACTTATGAATATATGTCATCTATTCTGCTTTTT CACTTCTTCTGCTTAATATATTT
• Tissue: pods
• Gene name: LI_gene_172956;
• Additional information: details;

Expression of Ll_transcript_341785

FPKM

• PAB: 2
• PNAB: 12.8
• PS1: 15.4
• PS2: 11.8
• PS3: 14.3
• PW1: 9.2
• PW2: 9.8
• PW3: 7.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341785

• Blastp: Zinc finger BED domain-containing protein DAYSLEEPER from Arabidopsis with 62.88% of identity
• Blastx: Zinc finger BED domain-containing protein DAYSLEEPER from Arabidopsis with 62.88% of identity
• Eggnog: zinc finger(ENOG41115TD)
• Kegg: Link to kegg annotations (AT3G42170)
• CantataDB: Link to cantataDB annotations (CNT0000436)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455402.1)
• Pfam: Domain of unknown function (DUF4413) (PF14372.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;