| Id Trinity | TRINITY_DN49880_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_343973 |
| Sequence | AAATTAGATAATTTATACATGGTATAAAGATTATGTTTCTTATTTCTCTTCCTCACTCTCTTTAAACCAACACATTCCTCTCAATAACAATAACAATTCT ATGCTCCAAAGGTTGAGATTTGTACACTCTTCTTCTCTTCTCCATCATCATCATCATCACCTTTTACACCAACCCACTAAATCAAAATCTCATTTCTACA ATTACCAATACTACCCTTTCTCAATTCCACCTCTCAAAGTGTTCTCAATGGCCACGTCATCATCTTCATCTCATTCTCATAACTATACTAATCGACTTGT TTCAGAACAAAGCCCTTATCTTCTACAACATGCACATAACCCAGTTGAATGGTATCCATGGGGTGAAGAAGCTTTCTCTATAGCACGCAAACGAGATGTA CCTATCTTCTTATCAATTGGGTACAGCACTTGTCACTGGTGTCATGTCATGGAGGTCGAGTCTTTTGAGGATGAAGGGGTTGCCAAGTTGTTGAACGATT GGTTTGTAAGCATTAAGGTGGATAGAGAGGAGCGGCCTGATGTTGATAAGGTATACATGACGTATGTGCAGGCTTTGTATGGTGGAGGAGGTTGGCCCCT CAGTGTGTTTCTTTCCCCTGATTTGAAACCTCTAATGGGTGGAACTTACTTCCCCCCTGATGATAAGTATGGAAGACCGGGATTTAAGACTATACTTAGA AAGGTAAAGGAGGCTTGGGATAGTAAGAGGGATATGCTAGTTAAGAGTGGAGCGTCTGCAATTGAACAGCTTTCTGAGGCATTGTCTGCTAGTTCCATTT CCGATAAGTTGCCTGATGGAGTTCCGGAGGAAGCATTAGGCCTATGCTCAGAGCAGCTCTCTGGGAGCTATGATTCAAAGTATGGTGGGTTTGGATCTGC ACCGAAATTTCCCAGACCAGTTGAGATCAACTTGATGCTTTACCACTCCAAAAAATTGGAGGATACTGGGAAGTTGGGGGAAGCTAATGGAAGTCGGAAA ATGGTTTTCTTTAGCTTGCAATGCATGGCAAAAGGGGGCATTCATGATCATATTGGAGGGGGGTTTCACAGATATAGCGTGGATGAGTGCTGGCATGGCT TCAGAAATGCTGAAACTGAATTGAAACAGCAGTTAACCATTGCCAGTCGAAATATAGTGCTGGTAACCATCACTGTCACCTGAGAGATCAAAAGAGCAGC ATGATGGTGGCTTCCCTAACATGAAACTTCTAGATAATGATACTGTAGGTTCTCTCCCTCTCTCTTTGCACAACACAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_172960; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343973
| Blastp | Uncharacterized protein B0495.5 from Caenorhabditis with 49.66% of identity |
|---|---|
| Blastx | Spermatogenesis-associated protein 20 from Homo with 51.29% of identity |
| Eggnog | mannose-6-phosphate isomerase activity(COG1331) |
| Kegg | Link to kegg annotations (CELE_B0495.5) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419202.1) |
| Pfam | Protein of unknown function, DUF255 (PF03190.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |