Ll_transcript_343980

• Id Trinity: TRINITY_DN49880_c2_g1_i8
• Name Transcript: Ll_transcript_343980
• Sequence: CTCTTACTGATTATTACATTGTAGGACCCTTAAAATGCAATCCCATTGTAGGATGATTACATTGATTCAATTAAGGTCATTAAAAAAATTTCATCTTTCA ATTAGGTGCAAAATCATACAGAACCGTCAGGGTCTTATACAAATAAAATGCCATGACATGGCCCAATATGGGCCAATATCCACCGATGTGGCTGTCAATT GAATTTGTTTTTAACAATTCAATTGAATCAAATTATTTTTCTCAAACAAAAATGCATTTCTTAATTATTAATTATTTGTTTGCTATGGACACCCTAACTA GTAACTACAGTATGTTTGGATAATAATATATCAATGTTTGCCTTGATACTTACTTTACAAATTTGTTTAATAAACTGTTGTTTGTTTTGTTTAAGTAAAC CACTATGTATTTTGAAACATATGTTCTAGTTGATATTAACCATAAGCAGATAGTTCACGGAGATCATTTTCCCTATATAAAACTTGTAGCTGAAGTTGTG TCAATTCTTTCAGAGCATGTCTTGGCTGTGTGGCTTGTTGTCCTGATTTCCTTTTGTAACTTTGATATTTATCTAGTGTCTTGACTGTGTCTCAGAGTTG TTGTAATTTATGTCGATTCGTTTAATTTTTGGAGTTGGTTTTCAACCTGGTATGCTCTTTTTAGGTTGATGACATACTTGGAGACCATGCTGCTCTTTTT AAGGAGCACTATTACATAAAGCAGTCGGGTAACTGTGATCTGTCTAAAATGAGTGATCCTCACGATGAATTCAAGGGAAAGAGTGTGCTGATTGAGAGAA AGGATGCTTCAGAAATGGCAGAAAAATATGGCATGCCAGTTGAGACATATCAAGAAATTCTTGGAGAAAGTAGGCGTAAGCTGTTTGAAGTAAGATCAAG GCGGTCAAGACCACACTTGGATGATAAGGTTATTGTATCTTGGAATGGACTGGTAATCTCATCATTTGCTAGGGCTTCTAAGATTCTCAAGTGTGAAGCT GAAGGGACCAAATTCAACTTTCCTGTTGTTGGCACTGAACCAAAGGAGTACCTGGCGATTGCAGAAAAGGCAGCATCCTTTATTAGGAAGCAACTTTACA ATGCGGAGACTCGCAGGCTACACCATAGTTTCAGAAACTCTCCATCTAAAGCTCCTGGGTTCTTGGATGATTATGCTTTTCTGATATCCGGATTGCTGGA TCTCTATGAGTTTGGCAGTGGAATCAACTGCCTCTCGTGGGCAATTGAATTACAGGAAACGCAGGATGCTTTGTTTCTTGATAGGGACGGAGGTGGATAT TTCAATAATACAGGAGAAGATCGTTCAGTTCTTCTCCGTGTGAAGGAAGACCATGACGGGGCAGAACCCTCTGGGAACTCAGTTTCCGCTATAAATCTTA TAAGATTGGCATCCATGGTTTCCGGAAGTAAAGCTGAGCATTATAAGCGAAATGCAGAACATCTTCTGGCGGTTTTCGAGAACAGATTGAAAGATATGGC TATGGCAGTACCTCTAATGTGTTGTGCTGCAGACATGCTTCGTGTACCTTCTCGAAAGCAAGTGGTTGTCGTCGGTGAAAGGACTTCCGAGGAATTCGAA AGCATGCTTGCTGCAGCTCATTCATTGTATGATCCCAACAGAACAGTTATTCATATAGATCCTAACAATGAAGAAGAGGTGAAATTTTGGGAAGTAAATA ACAGCAACATTGCTCTCATGGCTAAGAATAACTATAAAGACAACAAGGTTGTTGCTCTTGTATGCCAAAACTTCACTTGTAGCCCTCCTGTGACTGATCA TTCTTCACTTGAAGCCTTGATCTCCCAGAAATCCCCATCTTATTCCACATAAGCTTTAAGCTAATGGTCATAATTTATGGTGGGTGGGAAATAAATTGGA TACGAGTCTCGGCGAAATGGTAAGGTTATTTGTCTTGTGACCTCGTGCGCTGAGCCACCTTTTTAATGTTACTTGATGTATGGTCTTCATCTATAGAATT TGCCTGGTTCTGACTTTTGTATCCCCTTTTTATATTCTTCATTGGTATTGGATTTATTCACATGCTTTTTTACATACAAGGATCCCATGTCCTAAAAAAA TCACGTTTAATATCTATAAGCCAATCAAATTTCAACAAGTAACAATATATATTTTTAGTTTATATTTTATAATTTTCTTTTTAATTAAACATATTTTGTT AATTGAATGATGAGGACACAAAATGTGTGTAATTTATAATATTCATTCCTTCTCTTTTGCATGTCTTCAAGAAGCTAGAATTGTGATCCAAAATTGATAC ATAATGTATATTTTGTAGGTAAAGCTTGAAGAAAATTATTTTCTTTTTCAGTAATGTGGAATTTTCCATACAAAGTTTGTGCCTCATTTTTTCTCGATTA ACTGGCATAGTGGCCATGGCATGGCAAAGGAATTATAAATCCGGATGCAAATTAGTTAGGTAAACCTTACACATATAAAGGTTAATAGCAATTTGAACCA CGAAGGATGATTGCCAACTACATCGGTCATTGTGGGATCGATAGTCGGTGTTACATCGGTCATTGTGGGATCGATAGTCGGTGTTACATCGGTCATTGTG GGATCGA
• Tissue: pods
• Gene name: LI_gene_172960;
• Additional information: details;

Expression of Ll_transcript_343980

FPKM

• PAB: 1
• PNAB: 0.5
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.3
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343980

• Blastp: Spermatogenesis-associated protein 20 from Homo with 33.42% of identity
• Blastx: Spermatogenesis-associated protein 20 from Homo with 33.25% of identity
• Eggnog: mannose-6-phosphate isomerase activity(COG1331)
• Kegg: Link to kegg annotations (64847)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419203.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;