Id Trinity | TRINITY_DN49883_c1_g3_i4 |
---|---|
Name Transcript | Ll_transcript_343595 |
Sequence | GCTATGAAAATGTTCTCAAGAAGGTTCATGATATCTCTGTTTCCTTATGTTTTACTTTATATCCCTTGTTTCTATTTTTTGGATTCGGATTCAAGTTTTT ACTTTTCAGGAAGTAGGTCTTTTTAGGCTTCTTTTGATTGAATAGAAAATGGAGAAGAAAACACATGTTGAAAATCATTTTCTCTGGTGCTGTAGTTTGT AGAAAACTACAACTCCCTTCTTACAACTATTATTTTCGGTCTGACTAAGCTACATGCATAACCTCTACAATAAGGATGATGGTTAAGTAATGTCCACAGT AATCCCTTTTCAAACTGGCAATTGTAGGATTCGAATCCCTAACGTCGTGGTTAAGGTTTGATTGGTGTCATAGTCGAGTTTTAAGTGAGAGTGTGAGACC AACCATGTTAGTTTTTTTCTTTTGAAAAATGTTGTTTAAAACATTTGTGAACTATCTTGTGGCAATTGGTGAAGGGTGACCATTAAATTTTTAAAATGCC AACAGTGTATCTAATCAATAATTTAAATCTATAATACAAATGTACCTTATAAATTGACTAGCATAATATTTCAATACAAAGAGAGGGAAATAAACAGCAT CATTGGAGATAGAAAGACATTTAATGTTATGATTCAAAAGGAAAACTTATATACCATGCATTATAATTTGTTTCAAAGGTTGCTTAAATTCATATGCACC TTTCTCTGGGAGGGTCTTTGTATGATTTTAACGTTGCATGCTTTATTCAATAATGGACCATTTTCAACATAGCATTTGTGCATTTAAAATTTGTTTTTCT TAATCCATAGAGTAGCTATTCATTTCAGTTTTTTATCTATTCCCCTTTCAGTGGATGCCAGAGTTGCGTAGATTTGCACCTAATGTTCCAGTTGTTCTTG TTGGCACAAAGTTAGGTGAGCAGCAGCACATAGAAAAGCTTGCACATTTATTTGTTGACTTTTCTGACTGAATAGAGGGAAGAGGTGAATGACATTGTGT TTTCTATTATTAATGCTAGATCTTCGTGAAGATCATCGATATTTCGCTGATCACATGGGTTCTAATGTTATAACATCTGCTGAGGGTGAAGAACTGAGGA AACAAATAGGCGCTGCAGCGTACATTGAATGCAGTTCGAAGACGCAGCAGAATGTGAAAGCAGTTTTTGACACTGCAATTAAGGTTGTTCTCCAACCACC AAGAAGGAAAGAAATGGCAAGGAAGAAAAGGCGTGGGTCGGGTTGCTCACTTGTTGGAATCATGTGTGGAGGCTGTGCTGCTTAGTTTACATCAATTGCA TCATCACATACTTTTGATGTGGATCTTATTTGCAAAAACTTCAAGCTTCAAGTTTCAAGTGTGGAATCCTGACTCCTAATTACATATCTTAATGTGCTAT CCTTATGCTTTTATTGTAACTAGAGGGAAACTTTCATTCTCTCTATTATTACTTGGCCATGTTTTGTATTATAATATATCACCACCAATTCATTCACCCA AAAGAACTTTCATATAGCTGTGTCTCTATTAATTGTGCATGCAAAGGTGGAGAAGTTATTGAATCCAGCCAACAATATTTACCAAATATGGGTG BLAST |
Tissue | pods |
Gene name | LI_gene_172988; |
Additional information | - |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343595
Blastp | - |
---|---|
Blastx | Rac-like GTP-binding protein ARAC7 from Arabidopsis with 75% of identity |
Eggnog | GTP-binding Protein(COG1100) |
Kegg | Link to kegg annotations (AT4G28950) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458061.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |