Ll_transcript_343108

• Id Trinity: TRINITY_DN49884_c5_g1_i1
• Name Transcript: Ll_transcript_343108
• Sequence: TACATTTATTTCATAGTTAATGAGAGATATTGAATAAATCATCATCTTCAAGTATATGATTGAGATCCAAGCTCTTTCATTTTCATGTCAAATGCAACTA CTACCAAAATCCAAGAGGAACTCTGAAAACCCTAATTTGGAACCTATCTGAATTCTACTTCTCTGCTTCTTCAATTCATCGCGTAAGTTCCAATTCCTCT TAATTCTTCTGTGTATTAACCCAATTCTCACGCCAATTCGTATCAATTGTAAGTCTAAGGGTTTCGTTTCGATTCCAAGAATTCGAAACCCTAGAGAAAT TGGAAACCCTAATTGGGAGCTGGAACTCCTCTGTGAGTGATCTTTGTAAATTTTAGGGTGATTAAAGATTGAAAATGAAGACGCTAAATGGATTATTTGG TGCAAGACGGAGAAGGTTTCATTGGGTTTTCAATTGCCTTTGTTCAATGCTTGTGTTTTTCTTCTTTTACAATCGTGAGGATATTATTCGAAACCCTCTT CTTAGGCATTCTGCATATTTGGGGAATCATAAAAATGCAATTTTGAGAAATGGGTCTTCTCACATTGCTGTTGTTCATCGTAGAATGATTGAAACTAGCC TCAATACTTCTAGTGTACTTGGTGGGAATCGCGACGAAGATGTAGCATTAAGTAATCCCGGATTTTGTGCTGGATTGCACCACCATGATGGTTATGATAG CCCATGTGAATTCTTAAAGGTTAATCCTCAATGCTCTTCTGAGGGATATATTGATTACTTGAGGGTTTTTTATTGTAAATGTCAAAATTTTAGATTACTC GGTTATCTAGTATTTTTTGTGTGTCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCCGCAGACTACTTTTGTCCGTCTCTTGAGCATCTCTCGAAGC TCTTGAAATTGCCTCCAACCGTGGCTGGGGTTGTGCTGCTCCCTCTTGGGAATGGAGCGCCCGATGTGTTTGCTAGTATAGCTGCCTTTGTGGGTACTGA AACAGGTGAAGTGGGTCTTAACAGCGTGTTAGGCGGTGCTCTTTTTGTTACCTGTATTGTTGTTGGAACTGTTTCTTTATGTGTTGCAGACAAGGAGATT CGAATTGATCGAAGATGCTTTATAAGGGATATTAGTTTCTTTATATTCACTCTTGTTGCACTTTTTCTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGG AAACGATTGCTTTTGTATCAATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATATTGCGGAAACATGCACATAGGTTGAAATGGGATGCTGT CACCCCATTGCTTCCCGTCCAGGGAAGTGTGTTTTCTCAAGGTTATGAAGAGGATATCTCTATCTATAGCTCGTTACTTGACGTAGACACCGAGAGTGAT CCTCCCCGTCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAATCAGGGAAATAAAATCAATTCGGATGAAAGGCCTC CTTGGGGATGGAGCGATGAGAGCATGGAAAACACGAGGTTGTCGTTCTCCGTTTCAAACCTTTTTTTACTGATGGAATTGCCACTGTCAATTCCTAGACG GCTAACCATTCCGATGGTCAATGAGGAAGTATGGTCGAAGTCATATGCTGTAGCCAGTGCTTCATTGTCTCCAATTCTCCTAGCCTTTTTGTGTAGCACC CAAGATAATGTGAGTTATCGGAGTACTATTCTTTTTTATTGTATTGGTGTTACTATTGGGTGTACACTTGGTTTTCTTGCATATAAATACACAGTGGCTG ATCATCCACCGCATCAGTTTTTGATTCTCTGGGTTCTTGGAGGATTCATCATGAGCGTAGTGTGGTTCTACATAATAGCGAATGAGCTCGTGGCTCTATT AGTAGCTTTCGGTGTAATTTTCAGCATAAGCCCGTCCATCCTTGGATTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTCGCA TTGGCATTGGATGGTGAAGATGGACTTCAGATTGCGTTATCCGGGTGCTATGCCGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCATTGCTGC TTGGTGCCTGGTCAAAAAAACCGGATTTGTATGTGGTGCCGAAAGACAGTAGCTTGTTCTACACCATGGGATTTCTTATCACAGCACTTCTATGGGCACT TTTTGTTTTACCACGCAATAATATGCATCCTAGCAGAATATTAGGAATGGGTCTCATCACCCTTTATTTGGTGTTTCTTTCATTTAGGGTGTGCACCGCT ATGGGACTCGTAACTGTTGCTGGTTTAAGTTGACTTTTGATAACAGTTGTTGGTTGCCAAATTCTCACTTTTGATAATTGATAAAGTATTATGGTGTCTT TCGATCCATATAACCGACTCTATCTAGTGGGATAAAGGCTCGGTTGTTATTGTGGATCATGAGGCCATGTACTATAATTTCTGTCCTTCAGAAGTTTATA GGACCCCAAAAAAAAAAAAAATAGGAAAGAAAAAATGGGTATTCATATAGCAGGAATAAGTTGGTACACCAGCTTTAGATATCATTGTTGTATATCCCAA CATTATGCACACATCAACCAAATCTATAATCAGAATAAAGTATTTCTTAATATAAAAAGATAAGTTATCTCCTCCTGCCAGTGAAATCATGACATGTGTC ATGTTTTATTATTTTCTATAAAAACATTTATAAACTAAAAAAAATAGTACATGTGTAATGTTTTTACTGGTTTGAGGAGATAAATTATCTTCTAATATGA TGAGTTACATTATTCTCATCTACGATAGGTAGTTAGTATACATTATTAGTTGAAAATTGAAATATTTTTACCTATGCCACTTACTGAATCTCTATATATC TTAGTCTTAAATTACTATATGACAGTGTTAAGATTCCTTGTCTTTTG
• Tissue: pods
• Gene name: LI_gene_172997;
• Additional information: details;

Expression of Ll_transcript_343108

FPKM

• PAB: 4.3
• PNAB: 3.2
• PS1: 4.2
• PS2: 3
• PS3: 3.8
• PW1: 3.1
• PW2: 2.8
• PW3: 3.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343108

• Blastp: Cation/calcium exchanger 4 from Arabidopsis with 60.89% of identity
• Blastx: Cation/calcium exchanger 4 from Arabidopsis with 61.02% of identity
• Eggnog: exchanger(COG0530)
• Kegg: Link to kegg annotations (AT1G54115)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433584.1)
• Pfam: Sodium/calcium exchanger protein (PF01699.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;