Ll_transcript_343114

• Id Trinity: TRINITY_DN49884_c5_g1_i2
• Name Transcript: Ll_transcript_343114
• Sequence: TACATTTATTTCATAGTTAATGAGAGATATTGAATAAATCATCATCTTCAAGTATATGATTGAGATCCAAGCTCTTTCATTTTCATGTCAAATGCAACTA CTACCAAAATCCAAGAGGAACTCTGAAAACCCTAATTTGGAACCTATCTGAATTCTACTTCTCTGCTTCTTCAATTCATCGCGTAAGTTCCAATTCCTCT TAATTCTTCTGTGTATTAACCCAATTCTCACGCCAATTCGTATCAATTGTAAGTCTAAGGGTTTCGTTTCGATTCCAAGAATTCGAAACCCTAGAGAAAT TGGAAACCCTAATTGGGAGCTGGAACTCCTCTGTGAGTGATCTTTGTAAATTTTAGGGTGATTAAAGATTGAAAATGAAGACGCTAAATGGATTATTTGG TGCAAGACGGAGAAGGTTTCATTGGGTTTTCAATTGCCTTTGTTCAATGCTTGTGTTTTTCTTCTTTTACAATCGTGAGGATATTATTCGAAACCCTCTT CTTAGGCATTCTGCATATTTGGGGAATCATAAAAATGCAATTTTGAGAAATGGGTCTTCTCACATTGCTGTTGTTCATCGTAGAATGATTGAAACTAGCC TCAATACTTCTAGTGTACTTGGTGGGAATCGCGACGAAGATGTAGCATTAAGTAATCCCGGATTTTGTGCTGGATTGCACCACCATGATGGTTATGATAG CCCATGTGAATTCTTAAAGGTTAATCCTCAATGCTCTTCTGAGGGATATATTGATTACTTGAGGGTTTTTTATTGTAAATGTCAAAATTTTAGATTACTC GGTTATCTAGTATTTTTTGTGTGTCTTGCTGCTTTGTTTTATCTCTTGGGGAACACTGCCGCAGACTACTTTTGTCCGTCTCTTGAGCATCTCTCGAAGC TCTTGAAATTGCCTCCAACCGTGGCTGGGGTTGTGCTGCTCCCTCTTGGGAATGGAGCGCCCGATGTGTTTGCTAGTATAGCTGCCTTTGTGGGTACTGA AACAGGTGAAGTGGGTCTTAACAGCGTGTTAGGCGGTGCTCTTTTTGTTACCTGTATTGTTGTTGGAACTGTTTCTTTATGTGTTGCAGACAAGGAGATT CGAATTGATCGAAGATGCTTTATAAGGGATATTAGTTTCTTTATATTCACTCTTGTTGCACTTTTTCTGATTTTGGTTGTTGGTAAGGTGGGTGTTGGGG AAACGATTGCTTTTGTATCAATTTATGTTGTTTATGCATTCATTGTTGCTGCCAATGAGATATTGCGGAAACATGCACATAGGTTGAAATGGGATGCTGT CACCCCATTGCTTCCCGTCCAGGGAAGTGTGTTTTCTCAAGGTTATGAAGAGGATATCTCTATCTATAGCTCGTTACTTGACGTAGACACCGAGAGTGAT CCTCCCCGTCTCCCTCCTTCCTTGCCACAGTGGATGTGGTCTTCAAATGTGGCAATATATTCAAATCAGGGAAATAAAATCAATTCGGATGAAAGGCCTC CTTGGGGATGGAGCGATGAGAGCATGGAAAACACGAGGTTGTCGTTCTCCGTTTCAAACCTTTTTTTTACTGATGGAATTGCCACTGTCAATTCCTAGAC GGCTAACCATTCCGATGGTCAATGAGGAAGTATGGTCGAAGTCATATGCTGTAGCCAGTGCTTCATTGTCTCCAATTCTCCTAGCCTTTTTGTGTAGCAC CCAAGATAATGTGAGTTATCGGAGTACTATTCTTTTTTATTGTATTGGTGTTACTATTGGGTGTACACTTGGTTTTCTTGCATATAAATACACAGTGGCT GATCATCCACCGCATCAGTTTTTGATTCTCTGGGTTCTTGGAGGATTCATCATGAGCGTAGTGTGGTTCTACATAATAGCGAATGAGCTCGTGGCTCTAT TAGTAGCTTTCGGTGTAATTTTCAGCATAAGCCCGTCCATCCTTGGATTAACTGTATTAGCATGGGGAAATTCAATGGGAGATTTGATGTCAAATGTCGC ATTGGCATTGGATGGTGAAGATGGACTTCAGATTGCGTTATCCGGGTGCTATGCCGGTCCTATGTTCAACACACTTGTTGGTTTGGGGATCTCATTGCTG CTTGGTGCCTGGTCAAAAAAACCGGATTTGTATGTGGTGCCGAAAGACAGTAGCTTGTTCTACACCATGGGATTTCTTATCACAGCACTTCTATGGGCAC TTTTTGTTTTACCACGCAATAATATGCATCCTAGCAGAATATTAGGAATGGGTCTCATCACCCTTTATTTGGTGTTTCTTTCATTTAGGGTGTGCACCGC TATGGGACTCGTAACTGTTGCTGGTTTAAGTTGACTTTTGATAACAGTTGTTGTTGCCAAATTCTCACTTTTGATAATTGATAAAGTATTATGGTGTCTT TCGATCCATATAACCGACTCTATCTAGTGGGATAAAGGCTCGGTTGTTATTGTGGATCATGAGGCCATGTACTATAATTTCTGTCCTTCAGAAGTTTATA GGACCCCAAAAAAAAAAAAAATAGGAAAGAAAAAATGGGTATTCATATAGCAGGAATAAGTTGGTACACCAGCTTTAGATATCATTGTTGTATATCCCAA CATTATGCACACATCAACCAAATCTATAATCAGAATAAAGTATTTCTTAATATAAAAAGATAAGTTATCTCCTCCTGCCAGTGAAATCATGACATGTGTC ATGTTTTATTATTTTCTATAAAAACATTTATAAACTAAAAAAAATAGTACATGTGTAATGTTTTTACTGGTTTGAGGAGATAAATTATCTTCTAATATGA TGAGTTACATTATTCTCATCTACGATAGGTAGTTAGTATACATTATTAGTTGAAAATTGAAATATTTTTACCTATGCCACTTACTGAATCTCTATATATC TTAGTCTTAAATTACTATATGACAGTGTTAAGATTCCTTGTCTTTTG
• Tissue: pods
• Gene name: LI_gene_172997;
• Additional information: details;

Expression of Ll_transcript_343114

FPKM

• PAB: 0.1
• PNAB: 0.5
• PS1: 0.3
• PS2: 0.1
• PS3: 0.6
• PW1: 0.1
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_343114

• Blastp: Cation/calcium exchanger 4 from Arabidopsis with 59.28% of identity
• Blastx: Cation/calcium exchanger 4 from Arabidopsis with 59.28% of identity
• Eggnog: exchanger(COG0530)
• Kegg: Link to kegg annotations (AT1G54115)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433584.1)
• Pfam: Sodium/calcium exchanger protein (PF01699.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;