Id Trinity | TRINITY_DN49888_c1_g1_i11 |
---|---|
Name Transcript | Ll_transcript_342361 |
Sequence | ACAACACAACACAATACAATACAATAACAATAACAATACAATTCCCTCTCACTTTTCTTCTCGATCTCGCTTCTTCTTCTCCTCCTCCACGTTTCACACC TCCTACGATCTAATCCCCTCTTCTCTTTTCTTTTCTCGGGTTTTCAATTGACGGAAGAGCTGAAGATTCTGAAGCATGAGCATCGACAGTCCCAGGAGAG GGGACAGTTAGGGTTTGGAGCTTCTAACCTCGGAGGTGAGAATTTCCATGGGCGACGGTGGTGTCGTGTGCATGCCTTTGCAGCAACAGCAGCAGAATAT TGTTATGGATAATTCCTTTTGCGGAGGCAAGAACAGCGGTGATAATGGCTTCAATTCAAAATTGTTGAAGTTCGAGAGGAAGAAGAACATGAAGGAGAGG AAAGAGAGAACTGAGTTCGGGTTGGATAGAGTGAGCAAGAGAAGCACCAAAGATGATGACGGTGAAAATGGTGACAAGGAGGAAGTGGAAGAAGGTGAGT TGGGAACTTTGAATGACATCGAGAATGGTGAAATTGAGAATGGGGAGATTGTAATGAGCGGTGAGAGATGGAAAACAAGGGAAGTGGTGGAGAGGGGCGA GTTTGTTTCTGGGAAATGGAGGAAAGACGATTATGGGTCACGGAGAGGCGAGAAAGATGATATTGAGAAAGGAGAGTTCATTCCTGATAGATGGTATAAG GGTGGTGGAGAAATAGGGAAGGAAGATTATGGTAATAGTAGAATTCATAGTTACTATTCAGGTAGGGACAAAGGGTGGAAAAGTGATCGCGAACGTGAAT GGGAACACACACCCCCTTCTTCAGGGAGATATACTGCAAGTGAAATTTTTCCCAGAAAGAAAGAATTCAATAGAAGTGGGAGTCAACAACAGCATGCTAA AAATTCTCCAAGGTGGGAGAGTGGTGGACAACAGAGGAATGTGAGGATCAGTTCAAAGATTGTGGTTGATGAGAAAAATGTACACAGCAATGGTAAGGAC CATAATACAAGAGATTACAGCACTTCTGGAAGTCGTTTGAAGAGGCTTGGAAATGATTCAGACAGCTTTGAACATGAAAGAAAGCATTCTGGAGATTATG CCAGTTTGAAAAGTCGCAGGCTTTCTGATGACAGTTACTACTCTCATCGATCCGTGGAACGGCCTTACAGAAATAATAATTCTTCAAAATTGTCAGCTGA CAAGCATTCTTCTAGACCAAGCTTTGACAGACATGGGCGCAGCCCTGGTCATTCTGAGTGGTCCCCACGTGATCAAACCAGGTATTATGATCATCGAGAC CGTACTCCTGTCCGTCGATCCCCTTCTGGTCGTGACAGATCTCCATATAGCCGGGATAAATCCCCCCATGACCGGGAGAGATCGCCATATGAGAGGAATT GGGATAAAAGTCGTCAACATGATCATAAGTTGAGAAGTCCTATAATGCGGCAATCTCCCCCTGGCCGTGACAAATCTCCACATACCCGGGGAAAATCCCC CCATGGGCGGGAGAGATCCCCGTATGAGAGGAAGTGGGATAGAAGTCGTCAGCATGATCATAAATTTAGAAGTCCTTCACATGCTGATCAGTCACCACAA GATCGAGGTCGCCATCATTATCGCAGGGACTGTACTCCTAATTTAGTGGAAGGATCCCCTCTTGACCAAACCAGGAAAGATAGCCATCAAGAAACAAGTC ATAAAACATTGCCGAGTGAAAAACACAGTTCCAAGGATCATGTCGATGACCACATTCAACTGGAGTCAAATTGTTCAGCTACAGATTCTCAAGGCGAAAG AAATGTGCTTGATACCAATGGGATTACCGAGAAAGATAGCTGCAGTCAACTTGTAATGGAAAAAAAATCATGCAGCCCAACTGTCAGCTCCAAAGAATCT CCTGGTTTTGAGCCACCTCCTCCTGATGAGCTACTTTCGATGGAAGAAGATATGGACATTTGTGATACCCCTCCACATGTCCCTATTGTGTCTGTTTCTT CGTCAGCAGGGAAATGGTTTTACCTCGATTATGGGGGTGTAGAAAATGGGCCTGCTAAGTTGTGTGACATCAAGGCCCTTGTTGATGAAGGGGTACTAAT GCCGGATCACTTTATCAAGCACTCAGACAGTGACAGGTGGCTAACAGTTGAACATGCAGCTTCACCACTGGCAGCTCAGAGTTTTCCATCCATTGTGTCG GACACGGTAACTCAACTGGTTAGTCCTCCAGAAGCTTCAGGTAATGTTTTGGCAGAGACTAAAGATATTCTTCAACCTGGCCTTGGGAATTATAATGAAA TGCAAACCCCCTCTTTGCGGCCATTGATATGCGTTGACAATAGTGTGGTCGCATCTGAAATTTTGGAGGACCTCCACATTGATGAAAGGGTTGGAAATCT GCTAGAGGGTTATGATGTCATTCCTGGGAAGGAGCTTGAGACAATAAAAGGAGCTTTACAAATGAATTTTGAATATGCAAAATGGGAGGAATTGGGAGGC TACGAAGGTTTCCCTTGGCCTGGTTCCTGCTTTAGCGAAAATTGTGACTCAAAAAGTGATTTAGCATCAATAGATTCCGAGTATCAGTTAAGTATGTCCT GTGACAAGGAAACTTCCTGTGACAATGGATTTGCCTTTGGCATTCATGGTGACTGGTTTTCTTCCCGTTGGTCGTGCAAAGGTGGTGACTGGAAGAGGAA CGATGATGCCCAAGATAGATATTCTAGGAAGAAACTTGTCCTAAATGATGGTTTTCCATTATGTCTAATGCCAAAGTCTGGATGTGAAGATCCTCGTGGG TATCAAAAAGATGATCTGTATTTTCCTTCTCAGAGCAGGAGGCTTGATCTCCCTCAGTGGGCTTTTTGTGCTGATGAACGAATTGATTGTAGTGCTACGA GCAAATCAGTTCTAAGTAAACTTTCCTCTGGTAGAGGAGTGAAAGGAAATGTGCTTTCCGTGGTCAGGATTAACGCATGTGTAGTTCAGGATCAGGGATC ATTGGTCTCTGAGTCACGCCACAAGCCTCGAAGCAAGGATAGATACCATTCAAGGTCAGCACGGCCTTTCCCTTCAACAAGTGATGGCAAAAGATCATCA TCAACTGAAGAATCTCAGTCAAAAGTCATTAGTGATCAAGGTTCTTGCTGGAGTATGGAATTCATTAATGTTCCTAATGATCGTCTCTCTACTGTTCACG ACTTGCAGTTGTATTGGGGTGACTGGTATTATCTAGATGGTTCTGGGCGTGAAAGAGGGCCTTCATCATTTTCAGATCTACAGTATTTTGTTCATCAAGG TATAATTAAAAATCATAGCAGTGTGTTCAGGAAAAGTGATAAAGTGTGGGTTCCTGTTACCTCTGCCGCAGAAACTTCTGATGTCAGTCTCAGGAGCCAC CAAGAAAGCAATTCAACACCTGGTGCATGCTCTGGACCTCCATCCATAAAAACTCAAGGTTTTTCGTTCAGTGAACCTGATACAAATTCAAGTTTGTTTA ACAGCATACACCCTCAGTTTGTTGGTTACACTCGCGGGAAGCTTCATGAATTGGTAATGAAGTCATACAAGAGCCGAGAGTTTGCTGCAGCTATAAATGA GGTTTTAGATCCATGGATCAATGCTAGACAGCCTAAGAAAGAAATGGAGAAACAAATATATTGGAAATCTGATGGTGATGTACGTTCTGCCAAAAGAGCC CGGATGCTGGTGGTTGGTAGTGAAGAAGACAGTGATTTGGAAGATCATTCTACTATTGACAAATATGATTCCACTTTTGAGGATCTATGCGGTGATGCTA CTTTCCCGGCAGAGGAGGTTGGTTATATTGATTCTGAGGTGCGAAGCTGGGGCTTATTGGATGGTCATGTGTTGGCCCGTGTTTTCCATTTTTTGAGATC TGATTTGAAGTCCCTTGTGTTTGCATCCATGACTTGCAATCATTGGCGCAAAGCTGCAAGGTTTTATAAAGAAGTCTCAAGACAGGTCAATATGTCTTCC TTGGGCATATCTTGTTCCGATTCCATGCTGTGGAACATTATGAATGCGTATGGGAAAGACAAGATCAGTTCTATGGTTCTGATGGGTTGTGTCAATATAA CGGCTGGCATGCTTGAGAAAATTCTTCTTTCATTTCCTGGTTTATCTACAATTGACATTAGAGGGTGTGGTCAGTTTGGAGAGCTGACTCCAAAATTTGC CAATGTGAAATGGATTAAGAGTCGAAGTTCACACATGACTAGAATTGGAGAGGAGCAACATAAAATTAGAAGCCTTAAACACATTACAGAGCAAACTTCA TCCGTTTCTAAATCCAGCAGTTTGGGTATGGACGAATTTGGTCAATTGAAGGACTATTTTGACAGTGTGGATAAGAGAGATCCAATGAAGCAATTATTCC GTCGGAACTTATACAAGAGATCAAAACTATATGATGCTAGAAAGTCCTCTTCCATTCTATCTAGGGATGCTCGTACAAGACGATGGGCAATTAAGAAATC TGAAAGTGGCTATAAAAGGATGGAAGAGTTCCTCGCATCAAGACTGAAGGAAATTATGAAGACAAACTCCTGTGACTTTTTTGTGCCCAAGGTTGCAGAA ATTGAGGCTAAAATGAAAACTGGTTATTACAGTGGCCGGGGATTGAGTTCTGTCAAGGAGGACATCAGTAGAATGTGCCGTGATGCAATAAAAGCTAAGA ATCGAGGTGATGCTAGTGACATGAACCATATTATCACGCTATTCATTCAGCTTGCAACACGGTTGGAGGAGGGCTCTAAATCTGTTCAAGACAGAGATGT GAAGTCTTGGGAAAATGGCTCACCAGCAGTGTTCTCTTCTACTTCCTCAAAGTATAAGAAGAATAGATTGGTGACTGAAAAGAGGTATAGGAGTGGTGGT TTGGAAAATGTAGAGTATGTTTCTGATCGAGAAATCAGGAGGCGCTTATCAAAGTTGAACAAGAAATCTATGGACTCAGAGAGTGAAACATCTGATGATG ATCTTGATAGGTCTTATGAAGATGGCAAGAGTGACAGTGATACCACTTCCTCTGACAATGATAGTGACCAAGAAGTACATTCAGAAAATCTAATTGGGGC ATCACAGGGGGATGGATACTTAACCCCTGCTGAAGGATTGGATTTTATAACTGATGATCGTGAGTGGGGTGCTCGCATGACGAAAGCAAGCCTGGTCCCT CCAGTCACTCGTAAATATGAAGTCATTGATCGGTATGTCATTGTAGCTGATGAGGAGGATGTGCAGAGGAAGATGCGGGTTTCGTTACCAGATGACTATG CACAAAAACTGAGTGCGCAAAAGAATGGTGCTGAAGAGTCAGATATGGAACTTCCTGAAGTCAAGGATTACAAACCTAGAAAACAGCTTGGAAATGAGGT TATCGAGCAAGAAGTTTATGGAATTGATCCTTATACACATAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTGAAGGACAAGCATGTT TTTATAGAAGACGTGCTTCTTCGAACATTGAATAAGCAAGTTAGGAATTTTACTGGAACTGGAGGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATTG AAGATATTAAAAGGTGTGCTGAGGAGGACTGTGATGGAAAATTGGTTAGAATGTGTCAGAGTATATTAAAGGCCATGGACAGTCGTCCTGATGACAAATA TGTAGCTTACAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAAAAGGCTTTGATGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTG TGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTACAGAAAAATAGTAAAGATCCGGCGCCAGAATTCTATAATATCTACCTTGAGAGGCCAAAGG GTGATGCTGATGGCTATGACTTAGTCGTTGTTGATGCTATGCACAAGGCTAATTATGCCAGTCGAATATGTCATTCTTGCAGACCTAATTGTGAAGCCAA AGTTACTGCTGTTGATGGCCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACCTGGCGAGGAGATCACTTTTGATTACAATTCTGTTACAGAG AGCAAGGAGGAATATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTTTGCCGTGGGAGCTATCTGAATCTGACTGGTGAAGGTGCTTTTGAAAAGGTAC TGAAGGAGTTGCATGGAATTCTTGACCGTCATTACTTGATGCTACAAGCCTGTGAATTAAACTCTGTTTCTGAAGAGGATTATAATGAACTTGGAAGAGC TGGTTTGGGCAGTTGTTTGCTTGGAGGCCTACCAGATTGGCTTGTTGCATACACAGCTCACATTGTGAGGTTTATCAATTTGGAAAGAACTAAACTTCCC AAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATGTATGCCTTGAAGTGGAGAAGAGTGATGCAGAAGTCCAGGCTGAGGGTG TATACAACCAGAGGCTACAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTCATGAGATGTACTTTTGGTGATCCATGGAAAGCTCCACCTCCTCT TGAGAAGCTCAGTCCTGAAGCACTTGTTTCCTTTCTCTGGAAAGGGGATGATTCATTTGTTGGAGAGCTTCTCCAGTGCCTGGCTCCTCATTTGGAAGAG TCTACCTTGAATGATCTGAAGTCCAAAATTAATGCTCGTGACCCGTCTAGTTCTGGAGATATTCCAAAAGAGGTTAAAAGATGTCTATTATGGTTGAGGG ATGAGGTCCGAAATCTTCCCTGTACATACAAGTGCCGGCATGATGCAGCTGCTGACTTAATCCATTTTTATGCTTATACTAAGTACTTCTTTAGAATACG GGATTATGGAAGTGTAACTTCACCGTCTGTCTATATTAGTCCACTTGACTTAGGTCCGAAGTGTGCCGACAAGTTAGGAGCAGGATTTCAGGAGTATCAG AAGGTATATGGTAAACATTATTGTTTTGGGCAGCTGATTTTTTGGCATAATCAGAGTAATGTGGAGCCAGATTGTACCCTGGATAGAAACAGCAGGGGCT GCTTGTCATTACCAGACATTGGTTCCTTTTATGCCAAGTCTCAGAAGCCATCACGGCAGCGTGTTTATGGTCCGAGGACTGTCAGATCCATGCTGGCAAG AATGGAGAAGCAGCCACAGAGACCTTGGCCGAAGGACCAGATATGGTCATTCAAAAATTGTCCGAAATTTTTTGGCAGCCCAATGTTAGACGCTGTAATA AATAAGTCTCCATTGGACAGGGAGATGATTCATTGGTTGAAACACAGACCTGCTATATTCCAGGCCATGTGGGACCGTTGAAATTTTGCATGATGGTTAA GCCCTTATTAGAGTTCATCATCATTCTAAACTACCTGCCTCTTTTTGCGTGGGTAGTCTGTAATTATTATTCCAAAGCATCATTCTTGTGTATACTTTTT CACGTTTGATTTATAATTCATGTTGATGTAGGCCATTGTTTTACTCTTATCTAATATGAAATGAAATGTAAGAAAAAAGGTTTGTCAATTAGTCGATCTC ATCTTTACTCTTAACTGAGTAAATCTTCTTGGTGGTGGTGTTCGGTGTATATTGCTGGCGGCGGGTGGTGGCTGTGGAGATTCATTCATAAGATAGAACT ATGCTTGGAAAGACTTATTACCACAATATTGAAGTTGAGCCCTACCACACTATGTTCAACTAAGAAAACAAAGTCAGTGAATGATAAACCAAGTATTGAA GCAAACAAACCAAGAACCGAAGATATCATTTTCAGTTCTATTTAAGAGAAGGAAAAAATAAGCCCCAGCTCACTACTGCATCCTTCGAGGATTATTCAAG GAGCCCCAAAATCAATAAAATCAGATTAAAACTCAACATGTACCTAAACAGAAAAAATTAGTGAAGTCAATTCAAAAGTACAAACATATTCAAACTTTCT TCTTCTAAATCTTTGAGGTTTTCTCTCTAGTTTTTGTCCCC BLAST |
Tissue | pods |
Gene name | LI_gene_173030; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342361
Blastp | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 53.39% of identity |
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Blastx | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 54.14% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT4G15180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457876.1) |
Pfam | SET domain (PF00856.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |