Id Trinity | TRINITY_DN49888_c1_g1_i3 |
---|---|
Name Transcript | Ll_transcript_342350 |
Sequence | AGAGAACTCTCACAGCTAGAGAAAAAACGCGAAGATATATTATTTGCAGTTACAGAGAAAGAAAGAAAGAAGAAGCGCTAGATACAAAACCTTCGTCAAA AACACTGTATACATCTCACGATTTCTCTTCCGACGCTATACTTTCTCGATCCCCTCTTCTCTCGATCTTCTTCCATTCCCGATCCATCATTCTTTTTCAT TTTCTCGTTAACAGCTTTCTCCTCTTCCTCGTGTTCACTCTTCTTTCCATCAAACCCAACATTTCTTGTGTTCCTTATTTTGTTTCTGAATTTATCGATT AGGATTTTGAATTGGAGCTCTGGGATTGAGAGTCGTGAAGCATATGCAGCATGAGCATTGATAGCCCCGGTGGAGTAGAGGATTAGGGTTTCAAGGTTTC TATTTTGGGGTAAGATTTTTCAATGGGTGATGGAGGCATGTCATGCATGCCTCAGCAACAACAACATGTTATGGAGAATGGGGATGGGTTCGATTCCAAG TTGGTAAAGGTAGCTGATGGCAAAAGGAAGAAGAAAGTGAGAGTGGTAAAGGTGAAGGTGAAGAAGATAGTGGTTGTGCCAAAGAAGAAGAAGGCGAATG TATTGAACAGCAGTGGCGGGAACAATGTTGAGAGTGGTAAAGTATGTGGGGAGAAGGTGCAGAAGGAAGAAGTTGAGGAGGGTGAATTCGGGACTTTGAA GTGGCCAAATACTGAGCTTGAAAAGGGAGAATCTGCACAGAAGCTGCAGCCATCACCACCGCCGCCGCGGAGAGGTGAATTTGAGAATGGAGAGTTTGCA CAGGAGAAGCTGCCGCCACCACGATCGCAGAGAAGTGAAATCGAGAATGGGGACATTGTTACTGAGAGGTGGCAGAAAGGGGTGACGGTTGTTGAGAAGG GAGGTAGGAAAGGAGAATCCGAGAAAAGAGAGTATGGGTCATGGAGAGGTGGAAATGGAATGAAGGATGACTTTGAGAAAGGAGAGTTTATTCCGGACAG GTGGTATAGGAGTGGAGGCACGGGGAGGGATGATTGTGGTTACAATAGAATCCACAGGAACAAAGGGTGGAAAAGTGAACGTGAAAGAACACCCTCTAAT GAGATACACACGGGTGGTGACGATTATTTTAGAAAGAAAGAATTGAGTAGAAGTAGCAATCAGCATGCTAAAAGTGGTCCCAGGTGGGAGAGTGGGCCGG AGAGAAATGTAAGGATTAGTTCAAAGATTGTGGATGGTGAGAAAATTGAACACAACAGTGGTAGGAATTATACACGGGAATATTCCTCAGGAAGTCGGTT GAAGAGGCATGTTAATGATTCAGACGACCGCAAGCATTATGGAGATTATGCTGGTTTAAAAAGTAGAAGGCTTTCTGATGATAGTTCACACCATGTTTAT TCAGAGCATTATTCTTGGCTCTCTGTGGAGACATATTATGGAACTAGTTCTTCAAAATTATTAGCAGAAAAGTATTCTTCCAGGCATCGAGAATCTTCTG TGTCTGCCAGATCAAGTCATGACAGACATGGACGGAGCCCTGGTCATTTGGAGCGATCCCCATTTCATCGATCCAGATATTATGGTCCTAGAGATCGCAC TCCAGTGCAGCGATCGTCCAATGGCCACGACAGATCTCCTTATAAACATGAGAAATCACCACATGGACGTGAGAGATCCCCATGTGACAGGAATTGGGAT AAAAGTCGTCACCATGAGCATAAATTGAGAACTCCTGCTCACACTGAGCAGGCCCCACGAGATAGAGGTCAATATCATGATCGCAAGGACCTAAGTCCAA ATTTAGTAGAGCAATCCTCACTTGATCGAAATAAGCAAAAAGATCGAACTAGGCAAAATGTTCACCGAGAAACAGGTGGTAAAGCCTTATCAATTGAAAA GCACAACTCACAATATACTTGTAAAGATCATGAAGATAAACACATAAAAAATGAGTCAAATCATTCATTTATAGAATCTCAAGGTGAAAGGAATTTGCAT GATACCAATGGGTCTGTTAATATAGATGTCTGCATTGAACCTGAAAAGGAACAGTCGTCCTGCAGTCCGACTGTAAGCTGCAAATTCTCTCCTTTATTGG AGCCATCTCCTGAGGAGTTTCCTTCGATGGAAGAAGATATGGACATATGTGATACCCCTCCACACATTCCTGCGGTGGTGGATTCATCATCTGGGAAATG GTTTTATCTTGATTATGATGGCGTGGAACAGGGACCTTCTAAGTTATCTGATATAAAGGCCCTTGCTGATCAGGGTGTACTAATGCCAGATCACTTTATT AAGCACTTGGATAGCGACAGGTGGTTAACTGTTGAAAATGCAGCATCTCCATATGCAGCTCAGAGTTTTCAATCAATTGTGTCAGACAGCATAACCCAGC TGATAAACCCTCCAGAAGCTCCAGGTAATTTTTTGGCTGATACTGGAGATATTCAATCCGGCTCTGAGAATTATCAGGAAACACCAGCCCCTTTGCTGCA GCTGATGGTATGCCCTGATAATAGTGTGCTTGGATCTGAACTCTCGGAGGACCTCCACATCGATGAAAGGGTTGGGTTTCTATTGGAGGGTTATGACGTC ATGCCTGGAAGGGAGCTTGTCGTAATAAAAGAAGCTTTGCAAATTAATTTTGAATATGCAAAATGGGAGGGATTGGGAGGCTATGAAGATTTTCCTTGGC ATGATACGTGTCTGAGCACAGAGTGTGATTCAAGAATTGGTTCAGCATCAAGAGAATCTGAATCTCATTTAAGTGTGTCGTCTGCTGACAAGGATAATGA GTTTACCTTTGGTGCCTCTGGTGATTGGTTTTCTGCTCCATGGTCATGCAAAGGTGGTGACTGGAAGAGGACTGATGATGCCCAAGACAGATATTGCAAG AAGAAACATGTCCTAAATGATTGCTTTCCATTATGTCAAATGCCTAAGTCTGGATTTGAAGATTCTCGTTGGTCTGAAAAAGAGGATTTATATTATCCTT CTTACAGCAGGACTCTCGATCTTCCTTTGTGGGCTTTTTGTACTGATGAGAGGGTTGATTGCAGTGCTGTGAGCAGACCAGTTCAAAGTAAATTTGCTTC TGTTAGAGGAGTAAAAGGAAATGTTCTTTCAGTGGTCAGATTAAATGCATGTGTAGTCAAGGACCAGGGATCACTGGTCTCTGAATTATGCGAGAAGACC CGAGGCAAGGCTAGATACAATTCAAGGTCAAGTCGTCCATGCTCTTCAGCCAGTGACAACAAAAAATCTTCCACTGAAGAGGATTCTCAGTCAAAAGCTT TTAATGATCAAGGTTCTCATGGCTCCTGCAGGAGCATGGGATTCATTAATGTTCCTAAAGACCATCTGTGTACTGTCCATGACTTACAGTTACATTTGGG TGACTGGTATTATCTTGATGGATCTGGGCGTGAAAGAGGACCTTCATCTTTTTCAGAGCTACAGTTTTTAGTAGACCAGGGTATCATAAAAAAGTATAGC AGCGTGTTTAGGAAATGTGATAAACTCTGGGTTTCTATTACCTCTCTGGCAGAAACTTCTGATGTTAATCTCAGAAGCCACTGGATGAGCAGTTCAGTGT CTGGTGAATGTTATGGGCATCCATCTATGCAAACTCAGGGTGTTTCATTCAGTGAACTTTACACATTTAACAGCTTACACCCTCAGTTTATTGGTTATAT TCGCGGGAAGCTACATGAATTGATAATAAAATCTTACAAAAGTCGGGACTTCGCTGCAGCTATAAATGAGGTTTTAGATCCCTGGATCAATACAAGACAA CCAAAGAGAGAAATCGAGAAACAAATATATTGGAAATCAGAAGGTAACACACATGCTTCAAAAAGAGTGCGGATGCTGGTTGATGAAAGTGAAGACAGTG AATTTGAAGATAGCAGTGTGACGATCGAGAAGGACGAGTTCAGTTTTGAGGATCTATGTGGTGATGCTACTTTCTCTGGAGAAGAAAGTGTCATTAATGA TTCCGAAGTACAAAGCTGGGGCTTTTTGGATGGCCATATGCTGACACGAGTCTTCCACTTTCTGAGATCGGATTTGAAGTCCCTTGTCTTAGCATCAATG ACTTGCAAGCATTGGAGAGCTTCTGTAAGGTTTTACAGAGAAATCTCGAGACAGGTCAATTTGTCATCTTTGGGTCATTCTTGCATTGATTCCATAATGT GGAGCATAATGAGTTCTTATGAGAAGGACAAAATCAAATCTTTAATTCTATCAGGTTGCACCAATATTACTGCTGACATGCTTTGGAAAATTCTTCTTTC ATTTTCGGCTTTATCTACAATAGATATCAGAGGGTGCAGCCAGTTTGGAGAGTTGACTCTTAAATTTACCAACATTAAATGGATCAAGAGCCAAAGTTCA CTTTTAACGAAAACTGCAGAGGAGCCATATAAAATCAGAAGCCTTAAGCAAACTAATGAGCCAAATTCATTTGTTTATAAGGCTAGCAGTTTAGCTATTA GGGATGATTTTGGTGATCTGAAGGATTATTTTGATAGTGTGGATAAGAGAGACACAGCAAATCAGTTATTCCGACGAAACTTGTACAAACGGTCAAAATT ATATGATGCTAGAAGGTCCTCTTCTATTCTGCCTCGGGATGCTCGTACAAGAAGATGGTCAATTAAGAAATCTGAAAGTGGTTACAAAAGGATGGAGGAA TTTCTTGCTTCGAGACTGAGAGAAATTATGAAGGCAAACTCATGTGATTTTTTTGTGCAGAAGGTTGCAGAAATTGAGACTAAAATGAAAACTGGCTATT ACAGTGGGCATGGATTTAGCTCTGTCAAGGAGGACATCAGTAGAATGTGCTGTGATGCAATGAAAGCCAAAAATGGAAGTGCTGCCAGTGATATGAATCA TATTATTGCATTATTTATTCAGCTTGCAAAACGGTTGGAGGAGAGTTCTAAACATGTGAGTGACAGAGATGCACTGTTGAAGTTATGGGGGAATGTCTCA TCATCAGTATTATGTTCGAAATCCTCTAAGTATAAGAATAATAGATTGCTAACAGAGAGGAAGTATAAGAATAATGGAAAGCATAGTGTTTTGGATAAAG GAGAGTATGCCTCTGATCGAGAAAACAGGAGGCGTTTATCAAAGTTGAATAAGAAATCTGTGGACTCAGAGAGTGAGACATCTGATGACCTTTATAGGTC TTCTGAAGATGGCAAGAGTGATGGTGATACTACAACCTCTGGTAATGAAAGTGACCAAGAAACCCATTCAGAAAGTCGAATTAGGGAGTCAAGAGGGGAT GGATGCTTTACACCTGACAATGGATTATTCATTACTGATGATCGCGAATGGGGAGCCCGCATGACAAAAGCAAGTATGGTTCCTCCTGTTACTCGGAAAT ATGAAGTTGTTGATCAATATATCATTGTAGCTGATGAGGAGGATGTGCGAAGGAAGATGCGGGTTTCATTGCCAGATGACTACACAGAGAAGTTGAGTGC CCAAAAGAGTGGCCCTGAGGAGGAGTCTGATATGGAACTGCCTGAAGTGAAGGATTACAAACCTAGAAAACAGCTTGGAAATGAGGTTATTGAGCAAGAA GTTTATGGAATTGATCCCTATACACACAATCTTTTACTTGATTCTATGCCCGAGGAGTTAGATTGGTCACTAGAAGAGAAGCATTTGTTTATTGAAGACA TGCTCCTTCGAACATTAAATAAGCAAGCTAGGTATTTTAATGGAACTGGGCGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATTGAAGAAATTGTAAA GCATGCTGAGGAGGACGGTGATGCAAGGATCGTGAGAATGGGTCAAGGTATCCTAAATGCGATAGACAATCGTCCAAATGACAAATATGTTGCTTATAGA AAGGGGCTTGGTGTTGTATGCGACAAAGAAGAAGGGTTTAGAGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTG AGAAACAAGATGGGATTCGATCTCTACAGAAAAATCTTAAAGATCCTGCACCAGAATTCTATAATATCTACCTCGAGAGGCCAAAGGGTGATGCTGATGG GTACGACTTAGTTGTTGTTGATGCCATGCATAAGGCTAACTATGCCAGTCGATTATGTCATTCTTGCCAACCTAATTGTGAAGCAAAAGTTACTGCTGTT GATGGCCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACATGGTGAGGAGATCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAAT ATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTTTGCAGGGGTAGCTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTATTGAAGGAGTGGCA TGGAGTTCTTGTTCGTCATTATTTGATGATTGAAGCTTGTGAACAAAACACTGTGTCTGAAGAGGACTATAATGACCTGGGTAGAGCTGGTTTAGGAAGC TGTTTGCTAGGAGGTCTGCCAGATTGGCTTGTTGCATATGCGGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTCTAA AGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCTGAGGTTCAGGCTGAGGGTGTCTACAACCAAAG GCTTCAGAACCTTGCTCTCACTCTCGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGTAAAGCACCACCTCCTCTTGAGAAGCTCAGT CCTGAGGCAACCATTTCCTTCCTCTGGAAAGGAGAGGGTTCATTTGTTGAGGAACTTCTTCAGTGCATAGCTCCTCATGTGGAAGAAGACACCCTGAATG ATCTCAAGTCCAGAATTCACGCTCATGATCCTTCAAGTTCGGGAGATATTCAGAAAGAGATTCAGAAATCCCTTTTATGGTTGAGGGACGAGGTTCGAAA TCTTCCCTGCACATATAAATGCCGGCATGATGCTGCTGCGGACTTGATCCATATTTATGCATATACCAAGTACTTCTTTAGAATTCAGGATTATCAAACT ATTACTTCACCGCCTGTCTATATTAGTCCCCTTGACTTAGGTCCGAAGTGCGCTAACAAGTTGGGAGCAGGATTTCAGGAATATCGAAAGATATACGGCG AAAATTATTGTTTAGGGCAGCTGATTTTTTGGCATAATCAGAGTAATGTGGATCCTGATCTTAACCTGGCCAGAGCCAGCAGGGGTTGCTTGTCATTGCC TGAGATCAATTCCTTTTATGCTAAGGCTCAGAAGCCATCGCGGCAACGTGTTTATGGTCCAAGGACTGTCAGATCTATGCTAGCAAGAATGGAGAAGCAA CCCCAGAGACCTTGGCCCAAAGACCGGATATGGTCGTTCAAAAATTTTCCGAAATTATTTGGTAGCCCAATGTTAGATGCTGTGATAAATAACACTCCAT TGGACCGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCAAATTCCAGGCCATGTGGGACCGTTAAATTTTTTGCATGCATGGTTTGGGGAAGAGCAT AAAGCAAAACCCTTGTAGTCACTAATCAGATCATCATGGAGTGGTTCATCATTCAGTGCTGCCTGCCTCTTTTTAGTGGGAGGTCCTTGTACCATCACTT TTTCAGTCATTCTTGTGTACAGTTTTTCTTAACTTTTGATTTCTAATTCATTTGGTTGTAGGGGCATTGTTTTACTCTTGTGTGATGTCAAATGAAAGTT AGGAAAGAATGAAAGGTTAGTTGTATGCATTTAGTTTAGGCAGAATTTATAATATCCATTCTCTAAGTTATATTTTCTACTTTCAAGTTTATCATAAGTT TTTATAACCTTTTTAATTTCAATTTGGTCCTAAATAATAGATTTTGTAAATATTTTCATATTAAGCTCAATAGCATCACAATTGAATTTTGGTTGAGCAT TGAGAGTTGGGAAATCCTGT BLAST |
Tissue | pods |
Gene name | LI_gene_173030; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342350
Blastp | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 52.11% of identity |
---|---|
Blastx | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 54.26% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT4G15180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453756.1) |
Pfam | SET domain (PF00856.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |