Id Trinity | TRINITY_DN49888_c1_g1_i4 |
---|---|
Name Transcript | Ll_transcript_342351 |
Sequence | CTCTGCCTATCCCTTTCCCATTTTCTTGCAACTCTTCCATCCTAAGTTCCTAACCATACTCTTCTCACATTTCCCTTCTTCTACTTCTACTCTTGCTCAA TGAGCAACACCAAACAATTCTTTGCGAGAGTCAGAGATTCCGACAAAATGAAACAAATCTTTGCCGGAATCTCTGACCCCAACAAGAATAAGAAGAAACT CCTCTTATCTCTCTTTGCTACTCTTCTTCTTGTTGCCTCAGTTATTGCCATTGGTGTTGGAGTTAACTCTCACAAAAACTCACACCATTCCCACACCATA ATCAAAAGCGCATGCAGCTCCACATTCTACCCTGAACTATGCTTCTCAGCTATATCCTCTGAACCAGGCGTTACTCACAAAGTTTCTACCCACAAAGATG TCATTGAATTGTCCTTAAATATCACCACAAGAGCCGTTGAACACAACTTCTTCATCTTAGAGAAGCTCTTAACAACAGAAAAGGGTCTCTCAAAGAGAGA GAAAACTGCACTCCATGATTGCTTGGAGATTATAGATGAAACCCTTGATGAATTAAAAGAAGCTCGTGATGATATAAGATTGTATCCTAACAAGAAAACA TTGTATCAGCATGCTGATGACCTTAAAACCCTTATAAGTTCTGCCATTACTAACCAATTCACTTGCTTAGATGGTTTCTCACATGAAGATGCTGATAAGA AGGTGAGGACGGTTCTGGAAAAAGGGCTTGTTCATGTGGAACACTTGTGCAGCAATTCATTGGCTATGACAAAGAACATGACTGATAATGATATAGCCAA CTATGAACAGAAGATGGTGGTGGTGGGAAATAAGAACAGGAAGCTCATGGAGGAGGAGGAGACCGGGGTCAAGTGGCCGGAGTGGATTTCAACCGGAGAT AGGAGGCTTTTACAGGCGACAACAGTGAGGGCAGACATAGTGGTGGCAGCAGACGGCAGTGGGAACTTCAAGACGGTGTCGGCTGCGGTGGCTGCTGCAC CTGAGAAGAGTAGCAAGAGGTTTGTAATCAGAATTAAGGCTGGGGTGTATAGAGAGAATGTAGAGGTGCCAAAGAAGAAAACAAATATAATGTTCTTGGG TGATGGTAGAACTAATACTATCATCACTGGTAGCAGAAATGTTGTTGATGGTAGCACAACCTTTCACTCTGCCACTGTCGCCATAGTGGGTGGACAATTT TTAGCAAGAGATATAACCTTTGAAAACACAGCTGGTCCCTCAAAGCACCAAGCGGTGGCCCTAAGAGTTGGTTCTGACTTCTCAGCCTTCTACAACTGTG ACATTCTTGCATACCAAGACACTCTTTACGTCCACACCAATCGCCAATTCTTCGTTAATTCCCTCATAGCAGGAACAGTAGATTTCATCTTTGGTAACTC AGCAGTGGTATTCCAAAACTGTGACATCCATGCAAGACGTCCAGATTCAGGTCAAAAGAACATGGTCACTGCTCAAGGAAGAGTTGATCCAAACCAAAAC ACTGGCATTGTTATACAAAAGTGTAGAATTGGTGCAACTACTGATTTGGAACCTGTGAAGAAAAATTTCCCTACATATCTTGGTAGGCCTTGGAAAGAGT ATTCTAGAACAGTGGTTATGGAAACAGTAATAAGTGATGTTATTGACCCTGCTGGGTGGCATGAATGGAATGGGAACTTTGCTTTGAATACTTTGGTTTA TAGGGAATATAAGAATACCGGGCCTGGTGCTGTAACTACAAATAGGGTTGCATGGAAAGGGTTTAAGGTTATTACTGATGATGCTGAGGCCCAGGCTTTT ACTCCTGGGAGCTTTATTGCGGGCTCTAACTGGTTGCCCTCTACTGGTTTTCCTTTCACTCTTGGGCTATAAATTCTGTTGAATTTTAATCAAGTTTTTT CTTTTTTTATTTTTTATTTTTCTGTTTTCAATTACCCTCTTCGATTTTATTGGAGTAGCTTCCTATCATTCAAATCACGAACCTATTCCTCTCTACGTAA GGGTTTTCAATTGACGGAAGAGCTGAAGATTCTGAAGCATGAGCATCGACAGTCCCAGGAGAGGGGACAGTTAGGGTTTGGAGCTTCTAACCTCGGAGGT GAGAATTTCCATGGGCGACGGTGGTGTCGTGTGCATGCCTTTGCAGCAACAGCAGCAGAATATTGTTATGGATAATTCCTTTTGCGGAGGCAAGAACAGC GGTGATAATGGCTTCAATTCAAAATTGTTGAAGTTCGAGAGGAAGAAGAACATGAAGGAGAGGAAAGAGAGAACTGAGTTCGGGTTGGATAGAGTGAGCA AGAGAAGCACCAAAGATGATGACGGTGAAAATGGTGACAAGGAGGAAGTGGAAGAAGGTGAGTTGGGAACTTTGAATGACATCGAGAATGGTGAAATTGA GAATGGGGAGATTGTAATGAGCGGTGAGAGATGGAAAACAAGGGAAGTGGTGGAGAGGGGCGAGTTTGTTTCTGGGAAATGGAGGAAAGACGATTATGGG TCACGGAGAGGCGAGAAAGATGATATTGAGAAAGGAGAGTTCATTCCTGATAGATGGTATAAGGGTGGTGGAGAAATAGGGAAGGAAGATTATGGTAATA GTAGAATTCATAGTTACTATTCAGGTAGGGACAAAGGGTGGAAAAGTGATCGCGAACGTGAATGGGAACACACACCCCCTTCTTCAGGGAGATATACTGC AAGTGAAATTTTTCCCAGAAAGAAAGAATTCAATAGAAGTGGGAGTCAACAACAGCATGCTAAAAATTCTCCAAGGTGGGAGAGTGGTGGACAACAGAGG AATGTGAGGATCAGTTCAAAGATTGTGGTTGATGAGAAAAATGTACACAGCAATGGTAAGGACCATAATACAAGAGATTACAGCACTTCTGGAAGTCGTT TGAAGAGGCTTGGAAATGATTCAGACAGCTTTGAACATGAAAGAAAGCATTCTGGAGATTATGCCAGTTTGAAAAGTCGCAGGCTTTCTGATGACAGTTA CTACTCTCATCGATCCGTGGAACGGCCTTACAGAAATAATAATTCTTCAAAATTGTCAGCTGACAAGCATTCTTCTAGACCAAGCTTTGACAGACATGGG CGCAGCCCTGGTCATTCTGAGTGGTCCCCACGTGATCAAACCAGGTATTATGATCATCGAGACCGTACTCCTGTCCGTCGATCCCCTTCTGGTCGTGACA GATCTCCATATAGCCGGGATAAATCCCCCCATGACCGGGAGAGATCGCCATATGAGAGGAATTGGGATAAAAGTCGTCAACATGATCATAAGTTGAGAAG TCCTATAATGCGGCAATCTCCCCCTGGCCGTGACAAATCTCCACATACCCGGGGAAAATCCCCCCATGGGCGGGAGAGATCCCCGTATGAGAGGAAGTGG GATAGAAGTCGTCAGCATGATCATAAATTTAGAAGTCCTTCACATGCTGATCAGTCACCACAAGATCGAGGTCGCCATCATTATCGCAGGGACTGTACTC CTAATTTAGTGGAAGGATCCCCTCTTGACCAAACCAGGAAAGATAGCCATCAAGAAACAAGTCATAAAACATTGCCGAGTGAAAAACACAGTTCCAAGGA TCATGTCGATGACCACATTCAACTGGAGTCAAATTGTTCAGCTACAGATTCTCAAGGCGAAAGAAATGTGCTTGATACCAATGGGATTACCGAGAAAGAT AGCTGCAGTCAACTTGTAATGGAAAAAAAATCATGCAGCCCAACTGTCAGCTCCAAAGAATCTCCTGGTTTTGAGCCACCTCCTCCTGATGAGCTACTTT CGATGGAAGAAGATATGGACATTTGTGATACCCCTCCACATGTCCCTATTGTGTCTGTTTCTTCGTCAGCAGGGAAATGGTTTTACCTCGATTATGGGGG TGTAGAAAATGGGCCTGCTAAGTTGTGTGACATCAAGGCCCTTGTTGATGAAGGGGTACTAATGCCGGATCACTTTATCAAGCACTCAGACAGTGACAGG TGGCTAACAGTTGAACATGCAGCTTCACCACTGGCAGCTCAGAGTTTTCCATCCATTGTGTCGGACACGGTAACTCAACTGGTTAGTCCTCCAGAAGCTT CAGGTAATGTTTTGGCAGAGACTAAAGATATTCTTCAACCTGGCCTTGGGAATTATAATGAAATGCAAACCCCCTCTTTGCGGCCATTGATATGCGTTGA CAATAGTGTGGTCGCATCTGAAATTTTGGAGGACCTCCACATTGATGAAAGGGTTGGAAATCTGCTAGAGGGTTATGATGTCATTCCTGGGAAGGAGCTT GAGACAATAAAAGGAGCTTTACAAATGAATTTTGAATATGCAAAATGGGAGGAATTGGGAGGCTACGAAGGTTTCCCTTGGCCTGGTTCCTGCTTTAGCG AAAATTGTGACTCAAAAAGTGATTTAGCATCAATAGATTCCGAGTATCAGTTAAGTATGTCCTGTGACAAGGAAACTTCCTGTGACAATGGATTTGCCTT TGGCATTCATGGTGACTGGTTTTCTTCCCGTTGGTCGTGCAAAGGTGGTGACTGGAAGAGGAACGATGATGCCCAAGATAGATATTCTAGGAAGAAACTT GTCCTAAATGATGGTTTTCCATTATGTCTAATGCCAAAGTCTGGATGTGAAGATCCTCGTGGGTATCAAAAAGATGATCTGTATTTTCCTTCTCAGAGCA GGAGGCTTGATCTCCCTCAGTGGGCTTTTTGTGCTGATGAACGAATTGATTGTAGTGCTACGAGCAAATCAGTTCTAAGTAAACTTTCCTCTGGTAGAGG AGTGAAAGGAAATGTGCTTTCCGTGGTCAGGATTAACGCATGTGTAGTTCAGGATCAGGGATCATTGGTCTCTGAGTCACGCCACAAGCCTCGAAGCAAG GATAGATACCATTCAAGGTCAGCACGGCCTTTCCCTTCAACAAGTGATGGCAAAAGATCATCATCAACTGAAGAATCTCAGTCAAAAGTCATTAGTGATC AAGGTTCTTGCTGGAGTATGGAATTCATTAATGTTCCTAATGATCGTCTCTCTACTGTTCACGACTTGCAGTTGTATTGGGGTGACTGGTATTATCTAGA TGGTTCTGGGCGTGAAAGAGGGCCTTCATCATTTTCAGATCTACAGTATTTTGTTCATCAAGGTATAATTAAAAATCATAGCAGTGTGTTCAGGAAAAGT GATAAAGTGTGGGTTCCTGTTACCTCTGCCGCAGAAACTTCTGATGTCAGTCTCAGGAGCCACCAAGAAAGCAATTCAACACCTGGTGCATGCTCTGGAC CTCCATCCATAAAAACTCAAGGTTTTTCGTTCAGTGAACCTGATACAAATTCAAGTTTGTTTAACAGCATACACCCTCAGTTTGTTGGTTACACTCGCGG GAAGCTTCATGAATTGGTAATGAAGTCATACAAGAGCCGAGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCATGGATCAATGCTAGACAGCCTAAG AAAGAAATGGAGAAACAAATATATTGGAAATCTGATGGTGATGTACGTTCTGCCAAAAGAGCCCGGATGCTGGTGGTTGGTAGTGAAGAAGACAGTGATT TGGAAGATCATTCTACTATTGACAAATATGATTCCACTTTTGAGGATCTATGCGGTGATGCTACTTTCCCGGCAGAGGAGGTTGGTTATATTGATTCTGA GGTGCGAAGCTGGGGCTTATTGGATGGTCATGTGTTGGCCCGTGTTTTCCATTTTTTGAGATCTGATTTGAAGTCCCTTGTGTTTGCATCCATGACTTGC AATCATTGGCGCAAAGCTGCAAGGTTTTATAAAGAAGTCTCAAGACAGGTCAATATGTCTTCCTTGGGCATATCTTGTTCCGATTCCATGCTGTGGAACA TTATGAATGCGTATGGGAAAGACAAGATCAGTTCTATGGTTCTGATGGGTTGTGTCAATATAACGGCTGGCATGCTTGAGAAAATTCTTCTTTCATTTCC TGGTTTATCTACAATTGACATTAGAGGGTGTGGTCAGTTTGGAGAGCTGACTCCAAAATTTGCCAATGTGAAATGGATTAAGAGTCGAAGTTCACACATG ACTAGAATTGGAGAGGAGCAACATAAAATTAGAAGCCTTAAACACATTACAGAGCAAACTTCATCCGTTTCTAAATCCAGCAGTTTGGGTATGGACGAAT TTGGTCAATTGAAGGACTATTTTGACAGTGTGGATAAGAGAGATCCAATGAAGCAATTATTCCGTCGGAACTTATACAAGAGATCAAAACTATATGATGC TAGAAAGTCCTCTTCCATTCTATCTAGGGATGCTCGTACAAGACGATGGGCAATTAAGAAATCTGAAAGTGGCTATAAAAGGATGGAAGAGTTCCTCGCA TCAAGACTGAAGGAAATTATGAAGACAAACTCCTGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAACTGGTTATTACAGTGGCC GGGGATTGAGTTCTGTCAAGGAGGACATCAGTAGAATGTGCCGTGATGCAATAAAAGCTAAGAATCGAGGTGATGCTAGTGACATGAACCATATTATCAC GCTATTCATTCAGCTTGCAACACGGTTGGAGGAGGGCTCTAAATCTGTTCAAGACAGAGATGTGAAGTCTTGGGAAAATGGCTCACCAGCAGTGTTCTCT TCTACTTCCTCAAAGTATAAGAAGAATAGATTGGTGACTGAAAAGAGGTATAGGAGTGGTGGTTTGGAAAATGTAGAGTATGTTTCTGATCGAGAAATCA GGAGGCGCTTATCAAAGTTGAACAAGAAATCTATGGACTCAGAGAGTGAAACATCTGATGATGATCTTGATAGGTCTTATGAAGATGGCAAGAGTGACAG TGATACCACTTCCTCTGACAATGATAGTGACCAAGAAGTACATTCAGAAAATCTAATTGGGGCATCACAGGGGGATGGATACTTAACCCCTGCTGAAGGA TTGGATTTTATAACTGATGATCGTGAGTGGGGTGCTCGCATGACGAAAGCAAGCCTGGTCCCTCCAGTCACTCGTAAATATGAAGTCATTGATCGGTATG TCATTGTAGCTGATGAGGAGGATGTGCAGAGGAAGATGCGGGTTTCGTTACCAGATGACTATGCACAAAAACTGAGTGCGCAAAAGAATGGTGCTGAAGA GTCAGATATGGAACTTCCTGAAGTCAAGGATTACAAACCTAGAAAACAGCTTGGAAATGAGGTTATCGAGCAAGAAGTTTATGGAATTGATCCTTATACA CATAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTGAAGGACAAGCATGTTTTTATAGAAGACGTGCTTCTTCGAACATTGAATAAGC AAGTTAGGAATTTTACTGGAACTGGAGGCACTCCAATGAGCTACCCTTTGCAGCCTGTTATTGAAGATATTAAAAGGTGTGCTGAGGAGGACTGTGATGG AAAATTGGTTAGAATGTGTCAGAGTATATTAAAGGCCATGGACAGTCGTCCTGATGACAAATATGTAGCTTACAGAAAGGGGCTTGGTGTTGTTTGCAAC AAGGAAAAAGGCTTTGATGAAGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTC TACAGAAAAATAGTAAAGATCCGGCGCCAGAATTCTATAATATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGCTATGACTTAGTCGTTGTTGATGC TATGCACAAGGCTAATTATGCCAGTCGAATATGTCATTCTTGCAGACCTAATTGTGAAGCCAAAGTTACTGCTGTTGATGGCCATTATCAAATTGGTATT TATAGTGTTCGTAAAATTCAACCTGGCGAGGAGATCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCGGTTTGTTTGTGTG GAAGCCAAGTTTGCAGGGGTAGCTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTATTGAAGGAGTGGCATGGAGTTCTTGTTCGTCATTATTT GATGATTGAAGCTTGTGAACAAAACACTGTGTCTGAAGAGGACTATAATGACCTGGGTAGAGCTGGTTTAGGAAGCTGTTTGCTAGGAGGTCTGCCAGAT TGGCTTGTTGCATATGCGGCTCGCCTTGTGAGATTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAA AATATTTTTCAGATATATGTCTTGAAGTTGAAAGGAGTGATGCTGAGGTTCAGGCTGAGGGTGTCTACAACCAAAGGCTTCAGAACCTTGCTCTCACTCT CGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGTAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAGGCAACCATTTCCTTCCTC TGGAAAGGAGAGGGTTCATTTGTTGAGGAACTTCTTCAGTGCATAGCTCCTCATGTGGAAGAAGACACCCTGAATGATCTCAAGTCCAGAATTCACGCTC ATGATCCTTCAAGTTCGGGAGATATTCAGAAAGAGATTCAGAAATCCCTTTTATGGTTGAGGGACGAGGTTCGAAATCTTCCCTGCACATATAAATGCCG GCATGATGCTGCTGCGGACTTGATCCATATTTATGCATATACCAAGTACTTCTTTAGAATTCAGGATTATCAAACTATTACTTCACCGCCTGTCTATATT AGTCCCCTTGACTTAGGTCCGAAGTGCGCTAACAAGTTGGGAGCAGGATTTCAGGAATATCGAAAGATATACGGCGAAAATTATTGTTTAGGGCAGCTGA TTTTTTGGCATAATCAGAGTAATGTGGATCCTGATCTTAACCTGGCCAGAGCCAGCAGGGGTTGCTTGTCATTGCCTGAGATCAATTCCTTTTATGCTAA GGCTCAGAAGCCATCGCGGCAACGTGTTTATGGTCCAAGGACTGTCAGATCTATGCTAGCAAGAATGGAGAAGCAACCCCAGAGACCTTGGCCCAAAGAC CGGATATGGTCGTTCAAAAATTTTCCGAAATTATTTGGTAGCCCAATGTTAGATGCTGTGATAAATAACACTCCATTGGACCGGGAGATGGTTCATTGGT TGAAGCACAGACCTGCCAAATTCCAGGCCATGTGGGACCGTTAAATTTTTTGCATGCATGGTTTGGGGAAGAGCATAAAGCAAAACCCTTGTAGTCACTA ATCAGATCATCATGGAGTGGTTCATCATTCAGTGCTGCCTGCCTCTTTTTAGTGGGAGGTCCTTGTACCATCACTTTTTCAGTCATTCTTGTGTACAGTT TTTCTTAACTTTTGATTTCTAATTCATTTGGTTGTAGGGGCATTGTTTTACTCTTGTGTGATGTCAAATGAAAGTTAGGAAAGAATGAAAGGTTAGTTGT ATGCATTTAGTTTAGGCAGAATTTATAATATCCATTCTCTAAGTTATATTTTCTACTTTCAAGTTTATCATAAGTTTTTATAACCTTTTTAATTTCAATT TGGTCCTAAATAATAGATTTTGTAAATATTTTCATATTAAGCTCAATAGCATCACAATTGAATTTTGGTTGAGCATTGAGAGTTGGGAAATCCTGT BLAST |
Tissue | pods |
Gene name | LI_gene_173030; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342351
Blastp | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 53.72% of identity |
---|---|
Blastx | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 54.49% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT4G15180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457876.1) |
Pfam | SET domain (PF00856.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |