Id Trinity | TRINITY_DN49888_c1_g1_i8 |
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Name Transcript | Ll_transcript_342358 |
Sequence | ACAACACAACACAATACAATACAATAACAATAACAATACAATTCCCTCTCACTTTTCTTCTCGATCTCGCTTCTTCTTCTCCTCCTCCACGTTTCACACC TCCTACGATCTAATCCCCTCTTCTCTTTTCTTTTCTCGGTAATTCTCTCTCTTCTTCTTTTTCTTTTCTTTTTTTATTTTTTATTTTTCTGTTTTCAATT ACCCTCTTCGATTTTATTGGAGTAGCTTCCTATCATTCAAATCACGAACCTATTCCTCTCTACGTAAGGGTTTTCAATTGACGGAAGAGCTGAAGATTCT GAAGCATGAGCATCGACAGTCCCAGGAGAGGGGACAGTTAGGGTTTGGAGCTTCTAACCTCGGAGGTGAGAATTTCCATGGGCGACGGTGGTGTCGTGTG CATGCCTTTGCAGCAACAGCAGCAGAATATTGTTATGGATAATTCCTTTTGCGGAGGCAAGAACAGCGGTGATAATGGCTTCAATTCAAAATTGTTGAAG TTCGAGAGGAAGAAGAACATGAAGGAGAGGAAAGAGAGAACTGAGTTCGGGTTGGATAGAGTGAGCAAGAGAAGCACCAAAGATGATGACGGTGAAAATG GTGACAAGGAGGAAGTGGAAGAAGGTGAGTTGGGAACTTTGAATGACATCGAGAATGGTGAAATTGAGAATGGGGAGATTGTAATGAGCGGTGAGAGATG GAAAACAAGGGAAGTGGTGGAGAGGGGCGAGTTTGTTTCTGGGAAATGGAGGAAAGACGATTATGGGTCACGGAGAGGCGAGAAAGATGATATTGAGAAA GGAGAGTTCATTCCTGATAGATGGTATAAGGGTGGTGGAGAAATAGGGAAGGAAGATTATGGTAATAGTAGAATTCATAGTTACTATTCAGGTAGGGACA AAGGGTGGAAAAGTGATCGCGAACGTGAATGGGAACACACACCCCCTTCTTCAGGGAGATATACTGCAAGTGAAATTTTTCCCAGAAAGAAAGAATTCAA TAGAAGTGGGAGTCAACAACAGCATGCTAAAAATTCTCCAAGGTGGGAGAGTGGTGGACAACAGAGGAATGTGAGGATCAGTTCAAAGATTGTGGTTGAT GAGAAAAATGTACACAGCAATGGTAAGGACCATAATACAAGAGATTACAGCACTTCTGGAAGTCGTTTGAAGAGGCTTGGAAATGATTCAGACAGCTTTG AACATGAAAGAAAGCATTCTGGAGATTATGCCAGTTTGAAAAGTCGCAGGCTTTCTGATGACAGTTACTACTCTCATCGATCCGTGGAACGGCCTTACAG AAATAATAATTCTTCAAAATTGTCAGCTGACAAGCATTCTTCTAGACCAAGCTTTGACAGACATGGGCGCAGCCCTGGTCATTCTGAGTGGTCCCCACGT GATCAAACCAGGTATTATGATCATCGAGACCGTACTCCTGTCCGTCGATCCCCTTCTGGTCGTGACAGATCTCCATATAGCCGGGATAAATCCCCCCATG ACCGGGAGAGATCGCCATATGAGAGGAATTGGGATAAAAGTCGTCAACATGATCATAAGTTGAGAAGTCCTATAATGCGGCAATCTCCCCCTGGCCGTGA CAAATCTCCACATACCCGGGGAAAATCCCCCCATGGGCGGGAGAGATCCCCGTATGAGAGGAAGTGGGATAGAAGTCGTCAGCATGATCATAAATTTAGA AGTCCTTCACATGCTGATCAGTCACCACAAGATCGAGGTCGCCATCATTATCGCAGGGACTGTACTCCTAATTTAGTGGAAGGATCCCCTCTTGACCAAA CCAGGAAAGATAGCCATCAAGAAACAAGTCATAAAACATTGCCGAGTGAAAAACACAGTTCCAAGGATCATGTCGATGACCACATTCAACTGGAGTCAAA TTGTTCAGCTACAGATTCTCAAGGCGAAAGAAATGTGCTTGATACCAATGGGATTACCGAGAAAGATAGCTGCAGTCAACTTGTAATGGAAAAAAAATCA TGCAGCCCAACTGTCAGCTCCAAAGAATCTCCTGGTTTTGAGCCACCTCCTCCTGATGAGCTACTTTCGATGGAAGAAGATATGGACATTTGTGATACCC CTCCACATGTCCCTATTGTGTCTGTTTCTTCGTCAGCAGGGAAATGGTTTTACCTCGATTATGGGGGTGTAGAAAATGGGCCTGCTAAGTTGTGTGACAT CAAGGCCCTTGTTGATGAAGGGGTACTAATGCCGGATCACTTTATCAAGCACTCAGACAGTGACAGGTGGCTAACAGTTGAACATGCAGCTTCACCACTG GCAGCTCAGAGTTTTCCATCCATTGTGTCGGACACGGTAACTCAACTGGTTAGTCCTCCAGAAGCTTCAGGTAATGTTTTGGCAGAGACTAAAGATATTC TTCAACCTGGCCTTGGGAATTATAATGAAATGCAAACCCCCTCTTTGCGGCCATTGATATGCGTTGACAATAGTGTGGTCGCATCTGAAATTTTGGAGGA CCTCCACATTGATGAAAGGGTTGGAAATCTGCTAGAGGGTTATGATGTCATTCCTGGGAAGGAGCTTGAGACAATAAAAGGAGCTTTACAAATGAATTTT GAATATGCAAAATGGGAGGAATTGGGAGGCTACGAAGGTTTCCCTTGGCCTGGTTCCTGCTTTAGCGAAAATTGTGACTCAAAAAGTGATTTAGCATCAA TAGATTCCGAGTATCAGTTAAGTATGTCCTGTGACAAGGAAACTTCCTGTGACAATGGATTTGCCTTTGGCATTCATGGTGACTGGTTTTCTTCCCGTTG GTCGTGCAAAGGTGGTGACTGGAAGAGGAACGATGATGCCCAAGATAGATATTCTAGGAAGAAACTTGTCCTAAATGATGGTTTTCCATTATGTCTAATG CCAAAGTCTGGATGTGAAGATCCTCGTGGGTATCAAAAAGATGATCTGTATTTTCCTTCTCAGAGCAGGAGGCTTGATCTCCCTCAGTGGGCTTTTTGTG CTGATGAACGAATTGATTGTAGTGCTACGAGCAAATCAGTTCTAAGTAAACTTTCCTCTGGTAGAGGAGTGAAAGGAAATGTGCTTTCCGTGGTCAGGAT TAACGCATGTGTAGTTCAGGATCAGGGATCATTGGTCTCTGAGTCACGCCACAAGCCTCGAAGCAAGGATAGATACCATTCAAGGTCAGCACGGCCTTTC CCTTCAACAAGTGATGGCAAAAGATCATCATCAACTGAAGAATCTCAGTCAAAAGTCATTAGTGATCAAGGTTCTTGCTGGAGTATGGAATTCATTAATG TTCCTAATGATCGTCTCTCTACTGTTCACGACTTGCAGTTGTATTGGGGTGACTGGTATTATCTAGATGGTTCTGGGCGTGAAAGAGGGCCTTCATCATT TTCAGATCTACAGTATTTTGTTCATCAAGGTATAATTAAAAATCATAGCAGTGTGTTCAGGAAAAGTGATAAAGTGTGGGTTCCTGTTACCTCTGCCGCA GAAACTTCTGATGTCAGTCTCAGGAGCCACCAAGAAAGCAATTCAACACCTGGTGCATGCTCTGGACCTCCATCCATAAAAACTCAAGGTTTTTCGTTCA GTGAACCTGATACAAATTCAAGTTTGTTTAACAGCATACACCCTCAGTTTGTTGGTTACACTCGCGGGAAGCTTCATGAATTGGTAATGAAGTCATACAA GAGCCGAGAGTTTGCTGCAGCTATAAATGAGGTTTTAGATCCATGGATCAATGCTAGACAGCCTAAGAAAGAAATGGAGAAACAAATATATTGGAAATCT GATGGTGATGTACGTTCTGCCAAAAGAGCCCGGATGCTGGTGGTTGGTAGTGAAGAAGACAGTGATTTGGAAGATCATTCTACTATTGACAAATATGATT CCACTTTTGAGGATCTATGCGGTGATGCTACTTTCCCGGCAGAGGAGGTTGGTTATATTGATTCTGAGGTGCGAAGCTGGGGCTTATTGGATGGTCATGT GTTGGCCCGTGTTTTCCATTTTTTGAGATCTGATTTGAAGTCCCTTGTGTTTGCATCCATGACTTGCAATCATTGGCGCAAAGCTGCAAGGTTTTATAAA GAAGTCTCAAGACAGGTCAATATGTCTTCCTTGGGCATATCTTGTTCCGATTCCATGCTGTGGAACATTATGAATGCGTATGGGAAAGACAAGATCAGTT CTATGGTTCTGATGGGTTGTGTCAATATAACGGCTGGCATGCTTGAGAAAATTCTTCTTTCATTTCCTGGTTTATCTACAATTGACATTAGAGGGTGTGG TCAGTTTGGAGAGCTGACTCCAAAATTTGCCAATGTGAAATGGATTAAGAGTCGAAGTTCACACATGACTAGAATTGGAGAGGAGCAACATAAAATTAGA AGCCTTAAACACATTACAGAGCAAACTTCATCCGTTTCTAAATCCAGCAGTTTGGGTATGGACGAATTTGGTCAATTGAAGGACTATTTTGACAGTGTGG ATAAGAGAGATCCAATGAAGCAATTATTCCGTCGGAACTTATACAAGAGATCAAAACTATATGATGCTAGAAAGTCCTCTTCCATTCTATCTAGGGATGC TCGTACAAGACGATGGGCAATTAAGAAATCTGAAAGTGGCTATAAAAGGATGGAAGAGTTCCTCGCATCAAGACTGAAGGAAATTATGAAGACAAACTCC TGTGACTTTTTTGTGCCCAAGGTTGCAGAAATTGAGGCTAAAATGAAAACTGGTTATTACAGTGGCCGGGGATTGAGTTCTGTCAAGGAGGACATCAGTA GAATGTGCCGTGATGCAATAAAAGCTAAGAATCGAGGTGATGCTAGTGACATGAACCATATTATCACGCTATTCATTCAGCTTGCAACACGGTTGGAGGA GGGCTCTAAATCTGTTCAAGACAGAGATGTGAAGTCTTGGGAAAATGGCTCACCAGCAGTGTTCTCTTCTACTTCCTCAAAGTATAAGAAGAATAGATTG GTGACTGAAAAGAGGTATAGGAGTGGTGGTTTGGAAAATGTAGAGTATGTTTCTGATCGAGAAATCAGGAGGCGCTTATCAAAGTTGAACAAGAAATCTA TGGACTCAGAGAGTGAAACATCTGATGATGATCTTGATAGGTCTTATGAAGATGGCAAGAGTGACAGTGATACCACTTCCTCTGACAATGATAGTGACCA AGAAGTACATTCAGAAAATCTAATTGGGGCATCACAGGGGGATGGATACTTAACCCCTGCTGAAGGATTGGATTTTATAACTGATGATCGTGAGTGGGGT GCTCGCATGACGAAAGCAAGCCTGGTCCCTCCAGTCACTCGTAAATATGAAGTCATTGATCGGTATGTCATTGTAGCTGATGAGGAGGATGTGCAGAGGA AGATGCGGGTTTCGTTACCAGATGACTATGCACAAAAACTGAGTGCGCAAAAGAATGGTGCTGAAGAGTCAGATATGGAACTTCCTGAAGTCAAGGATTA CAAACCTAGAAAACAGCTTGGAAATGAGGTTATCGAGCAAGAAGTTTATGGAATTGATCCTTATACACATAATCTTTTGCTTGATTCTATGCCAGAGGAG TTAGATTGGTCTCTGAAGGACAAGCATGTTTTTATAGAAGACGTGCTTCTTCGAACATTGAATAAGCAAGTTAGGAATTTTACTGGAACTGGAGGCACTC CAATGAGCTACCCTTTGCAGCCTGTTATTGAAGATATTAAAAGGTGTGCTGAGGAGGACTGTGATGGAAAATTGGTTAGAATGTGTCAGAGTATATTAAA GGCCATGGACAGTCGTCCTGATGACAAATATGTAGCTTACAGAAAGGGGCTTGGTGTTGTTTGCAACAAGGAAAAAGGCTTTGATGAAGATGATTTTGTT GTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTTGAGAAACAAGATGGGATACGATCTCTACAGAAAAATAGTAAAGATCCGGCGCCAGAAT TCTATAATATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGCTATGACTTAGTCGTTGTTGATGCTATGCACAAGGCTAATTATGCCAGTCGAATATG TCATTCTTGCAGACCTAATTGTGAAGCCAAAGTTACTGCTGTTGATGGCCATTATCAAATTGGTATTTATAGTGTTCGTAAAATTCAACCTGGCGAGGAG ATCACTTTTGATTACAATTCTGTTACAGAGAGCAAGGAGGAATATGAAGCATCGGTTTGTTTGTGTGGAAGCCAAGTTTGCAGGGGTAGCTATCTGAATC TGACTGGTGAAGGGGCTTTCCAAAAGGTATTGAAGGAGTGGCATGGAGTTCTTGTTCGTCATTATTTGATGATTGAAGCTTGTGAACAAAACACTGTGTC TGAAGAGGACTATAATGACCTGGGTAGAGCTGGTTTAGGAAGCTGTTTGCTAGGAGGTCTGCCAGATTGGCTTGTTGCATATGCGGCTCGCCTTGTGAGA TTCATCAATTTTGAAAGAACTAAACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATATATGTCTTGAAGTTGAAA GGAGTGATGCTGAGGTTCAGGCTGAGGGTGTCTACAACCAAAGGCTTCAGAACCTTGCTCTCACTCTCGATAAGGTAAGGTATGTTATGAGATGTATTTT TGGTGATCCACGTAAAGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAGGCAACCATTTCCTTCCTCTGGAAAGGAGAGGGTTCATTTGTTGAGGAACTT CTTCAGTGCATAGCTCCTCATGTGGAAGAAGACACCCTGAATGATCTCAAGTCCAGAATTCACGCTCATGATCCTTCAAGTTCGGGAGATATTCAGAAAG AGATTCAGAAATCCCTTTTATGGTTGAGGGACGAGGTTCGAAATCTTCCCTGCACATATAAATGCCGGCATGATGCTGCTGCGGACTTGATCCATATTTA TGCATATACCAAGTACTTCTTTAGAATTCAGGATTATCAAACTATTACTTCACCGCCTGTCTATATTAGTCCCCTTGACTTAGGTCCGAAGTGCGCTAAC AAGTTGGGAGCAGGATTTCAGGAATATCGAAAGATATACGGCGAAAATTATTGTTTAGGGCAGCTGATTTTTTGGCATAATCAGAGTAATGTGGATCCTG ATCTTAACCTGGCCAGAGCCAGCAGGGGTTGCTTGTCATTGCCTGAGATCAATTCCTTTTATGCTAAGGCTCAGAAGCCATCGCGGCAACGTGTTTATGG TCCAAGGACTGTCAGATCTATGCTAGCAAGAATGGAGAAGCAACCCCAGAGACCTTGGCCCAAAGACCGGATATGGTCGTTCAAAAATTTTCCGAAATTA TTTGGTAGCCCAATGTTAGATGCTGTGATAAATAACACTCCATTGGACCGGGAGATGGTTCATTGGTTGAAGCACAGACCTGCCAAATTCCAGGCCATGT GGGACCGTTAAATTTTTTGCATGCATGGTTTGGGGAAGAGCATAAAGCAAAACCCTTGTAGTCACTAATCAGATCATCATGGAGTGGTTCATCATTCAGT GCTGCCTGCCTCTTTTTAGTGGGAGGTCCTTGTACCATCACTTTTTCAGTCATTCTTGTGTACAGTTTTTCTTAACTTTTGATTTCTAATTCATTTGGTT GTAGGGGCATTGTTTTACTCTTGTGTGATGTCAAATGAAAGTTAGGAAAGAATGAAAGGTTAGTTGTATGCATTTAGTTTAGGCAGAATTTATAATATCC ATTCTCTAAGTTATATTTTCTACTTTCAAGTTTATCATAAGTTTTTATAACCTTTTTAATTTCAATTTGGTCCTAAATAATAGATTTTGTAAATATTTTC ATATTAAGCTCAATAGCATCACAATTGAATTTTGGTTGAGCATTGAGAGTTGGGAAATCCTGT BLAST |
Tissue | pods |
Gene name | LI_gene_173030; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342358
Blastp | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 53.72% of identity |
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Blastx | Histone-lysine N-methyltransferase ATXR3 from Arabidopsis with 54.49% of identity |
Eggnog | Histone-lysine N-methyltransferase(COG2940) |
Kegg | Link to kegg annotations (AT4G15180) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457876.1) |
Pfam | SET domain (PF00856.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |