Ll_transcript_342359

• Id Trinity: TRINITY_DN49888_c1_g1_i9
• Name Transcript: Ll_transcript_342359
• Sequence: CTCTGCCTATCCCTTTCCCATTTTCTTGCAACTCTTCCATCCTAAGTTCCTAACCATACTCTTCTCACATTTCCCTTCTTCTACTTCTACTCTTGCTCAA TGAGCAACACCAAACAATTCTTTGCGAGAGTCAGAGATTCCGACAAAATGAAACAAATCTTTGCCGGAATCTCTGACCCCAACAAGAATAAGAAGAAACT CCTCTTATCTCTCTTTGCTACTCTTCTTCTTGTTGCCTCAGTTATTGCCATTGGTGTTGGAGTTAACTCTCACAAAAACTCACACCATTCCCACACCATA ATCAAAAGCGCATGCAGCTCCACATTCTACCCTGAACTATGCTTCTCAGCTATATCCTCTGAACCAGGCGTTACTCACAAAGTTTCTACCCACAAAGATG TCATTGAATTGTCCTTAAATATCACCACAAGAGCCGTTGAACACAACTTCTTCATCTTAGAGAAGCTCTTAACAACAGAAAAGGGTCTCTCAAAGAGAGA GAAAACTGCACTCCATGATTGCTTGGAGATTATAGATGAAACCCTTGATGAATTAAAAGAAGCTCGTGATGATATAAGATTGTATCCTAACAAGAAAACA TTGTATCAGCATGCTGATGACCTTAAAACCCTTATAAGTTCTGCCATTACTAACCAATTCACTTGCTTAGATGGTTTCTCACATGAAGATGCTGATAAGA AGGTGAGGACGGTTCTGGAAAAAGGGCTTGTTCATGTGGAACACTTGTGCAGCAATTCATTGGCTATGACAAAGAACATGACTGATAATGATATAGCCAA CTATGAACAGAAGATGGTGGTGGTGGGAAATAAGAACAGGAAGCTCATGGAGGAGGAGGAGACCGGGGTCAAGTGGCCGGAGTGGATTTCAACCGGAGAT AGGAGGCTTTTACAGGCGACAACAGTGAGGGCAGACATAGTGGTGGCAGCAGACGGCAGTGGGAACTTCAAGACGGTGTCGGCTGCGGTGGCTGCTGCAC CTGAGAAGAGTAGCAAGAGGTTTGTAATCAGAATTAAGGCTGGGGTGTATAGAGAGAATGTAGAGGTGCCAAAGAAGAAAACAAATATAATGTTCTTGGG TGATGGTAGAACTAATACTATCATCACTGGTAGCAGAAATGTTGTTGATGGTAGCACAACCTTTCACTCTGCCACTGTCGCCATAGTGGGTGGACAATTT TTAGCAAGAGATATAACCTTTGAAAACACAGCTGGTCCCTCAAAGCACCAAGCGGTGGCCCTAAGAGTTGGTTCTGACTTCTCAGCCTTCTACAACTGTG ACATTCTTGCATACCAAGACACTCTTTACGTCCACACCAATCGCCAATTCTTCGTTAATTCCCTCATAGCAGGAACAGTAGATTTCATCTTTGGTAACTC AGCAGTGGTATTCCAAAACTGTGACATCCATGCAAGACGTCCAGATTCAGGTCAAAAGAACATGGTCACTGCTCAAGGAAGAGTTGATCCAAACCAAAAC ACTGGCATTGTTATACAAAAGTGTAGAATTGGTGCAACTACTGATTTGGAACCTGTGAAGAAAAATTTCCCTACATATCTTGGTAGGCCTTGGAAAGAGT ATTCTAGAACAGTGGTTATGGAAACAGTAATAAGTGATGTTATTGACCCTGCTGGGTGGCATGAATGGAATGGGAACTTTGCTTTGAATACTTTGGTTTA TAGGGAATATAAGAATACCGGGCCTGGTGCTGTAACTACAAATAGGGTTGCATGGAAAGGGTTTAAGGTTATTACTGATGATGCTGAGGCCCAGGCTTTT ACTCCTGGGAGCTTTATTGCGGGCTCTAACTGGTTGCCCTCTACTGGTTTTCCTTTCACTCTTGGGCTATAAATTCTGTTGAATTTTAATCAAGTTTTTT CTTTTTTTATTTTTTATTTTTCGAAATTTTTGTTGTCCTGTATTAAGAATTAAGTAGTAGATGGGAAAAAGGAAAAAAGAAAAATAAAGTGAGAGAGATT GCTATTGCTATTTGGATGTTGCTATTGCTTGATAATAATATGGTTGGTGTTAATATATGTTCTGAAAATATTATTTGAGAATTAATAAATATTTTTTTTA TTGTAAAATGACAATTTTGTATTTATGTAATATAGTGCATAAACTACTGCATTTTAATTTAAAAA
• Tissue: pods
• Gene name: LI_gene_173030;
• Additional information: details;

Expression of Ll_transcript_342359

FPKM

• PAB: 0
• PNAB: 0
• PS1: 2.6
• PS2: 141.7
• PS3: 157.2
• PW1: 1.5
• PW2: 1.7
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342359

• Blastp: Pectinesterase/pectinesterase inhibitor U1 from Lycopersicon with 68.94% of identity
• Blastx: Pectinesterase 3 from Citrus with 69.75% of identity
• Eggnog: pectinesterase(COG4677)
• Kegg: Link to kegg annotations (544016)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430276.1)
• Pfam: Plant invertase/pectin methylesterase inhibitor (PF04043.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;