Ll_transcript_341723

• Id Trinity: TRINITY_DN49893_c2_g3_i6
• Name Transcript: Ll_transcript_341723
• Sequence: CATAAATGTAGCACCATAAGAATCAACCACTTGAAACCCTTTATTAAACGTAGAGAAATTTAATGTCTGCCAGTATGTCCTCAAACTTATTTTATTTGAA GCGATTAAAATATATCAGGATAGTTAGAAAATTAAATATTTATACATTTTTTTTTACTTTTGTTTCATTTTAATTGGTTTGGAACAAACTTAAGGACAAT GAATCCCGATATTTATTAAACATTCTATATCCTTTCAATCCTAACCTTTGTTTCTGACTATTATGAAAGTAACAACAACAACAAACATAAACTATTGTTA CAATTTATTGATGGAGGACCAGCAATCATCATCATCATCAAAACCAAAAACTGCTGATCTAGATGCTCCTCTTCATTCAATTGGGTTTGAGATTGAAGAA TTATCACCACAAAAAGTTTCAGGCCATCTTCTAGTTACCCAAAAGTGCTGCCAGCCATTTAAGGTGCTTCATGGAGGAGTATCAGCAATGATAGCAGAAG CTCTAGCAAGCATGGGAGCACATATGGCTTCTGGGTATAAAAGAGTGGCTGGAATTCAGCTTAATATCAACCATTTGAAACGAGCGGATATGGGTGACTT GGTCCAAGCTGAAGCTACCCCTTTAAGTGTTGGAAGAACCATTCAGGTTTTATTCCTCATCTCATCATTTCTCTTTTTTGGTTGGGAGTCATATCACCAA TAATGGATCCATACCATAAAAGCCAGGTCGGATCCATGAATTTCATTATCGGACATATGACCGGTACGAGCCGCTCATTTAACCAGTTTTATATCTAAAT CGTAATAACCTAATTTAAGTTCATCTCATGATTACTCTATTTTGGTTGGGTGACAAATCACCAATAATGGATCAATATTATAAAAATCAGCTCAGATATA TAAATTCGACTGTGAACCAGACACATGATTGATATGCGCCACTCATTTAACTAGTTTATATCAAAATCGTGATAACTAAATTTAAGTTGGTTGATTTAAA CCTAAGATTAGTGACTAATTTGGCCATTAAATCAATATATTGAACAAGTCAATAATTGGCCTAATTTTTTTATTGATGAAAGATAGATTATCAATACATT TCCAATGATGTTCTCTCAACATCACATGGCCCTAATGTAATTGGGACATCTCATTTTTTGGTGGGGTTGAAATGATTGAAGGAAAACAATTTTAAAGAAA AATGTATGGTAGTAGAAAATATGGGATAAACGTGAAGTTCTGGTATACATAGCACTCGTTCATTTCATATCCATTAAAAGTTGGACAAGGGTATGTTGTC ACAAATCTTATCCTAAAATCTATACCAAATCAATAACAACATGTTACATCAATCAAAAAAATTAAATACTTATATTTTTATTTATTTTTCTTCATTCAGA TTGACTTGATACATAATTGAGTACATACTTTGAGACAGTTGATCTCCATCCATACATAGCACTCATTCATTTAATATCCACTAAAAGTTATCAAAACAAC TTGCCAACTAATCTCTCTGTTTTTTAATATAAAAAACAAATATGCACATCTATTTTACCAATTTGCCCTCCCTCAATTTCGTCACAACTCACAAGTTTCC TCTTTCTCACTCATCTCTTCTTTTTCGGGGTACAATTACACATGTTTTTTAATTTTAATTAGGACCATCAACCCCCATTGCAAATGAGAACAAAATGAAA GGTTTTAGAAGTTGTAACAAATTGCACGTTTACACCAAACTTATAAATGTTTCTAAACGCCCTTTTCAGGAAGGAGTTGTAGTTCTATGAGTTTTTTCAC TTATAAACTTCTTCCTCCCTGCTCTCAACATATATCCGATATGAGATTTCACACTTGAGTAAACTCGACAAATATAACTTTGTTATTGCAGAGGTTTATT AATGTGAGTAAAGCATGTTATATAAGAGAGTTTTCATTGTAGCAGGTGTGGGAGGTGATGTTATGGAAGATTGATCCTTCAAATTCACAAAACAGATCAT TGGTATCATCTTCAAGGGTAACTCTAGTGAGCAACATGCCAATCCCAGATCATGCAAAAGATGCTGCTGAAGTGCTAAAGAAGTATGCAAAATTGTAAAT ATTCATGTATTGCCATTTAATTTATCTATGTAAAATTCAACTTATGCTTTAACTGAATTACATTATAATAATAATAATAAGGGTTCAAGATGTTAGTATC CGGGAAGGCACATTGTTACGGAGCCACAAACTATGAGAAGGGTATAGAGTTATTGACAAATGAGATATAACTTATGAGTCTTTCTACTTATAAATTCCTC CATTCATCATATTTTATCCAATATATAACTTCACACTTGAATATATACAACACCAAGTAGTAAA
• Tissue: pods
• Gene name: LI_gene_173064;
• Additional information: details;

Expression of Ll_transcript_341723

FPKM

• PAB: 1.7
• PNAB: 1.3
• PS1: 0.3
• PS2: 0.4
• PS3: 0.6
• PW1: 0.2
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_341723

• Blastp: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 from Arabidopsis with 70.48% of identity
• Blastx: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 from Arabidopsis with 69.81% of identity
• Eggnog: thioesterase Superfamily protein(COG2050)
• Kegg: Link to kegg annotations (AT1G48320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415889.1)
• Pfam: Thioesterase superfamily (PF03061.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;