| Id Trinity | TRINITY_DN49895_c3_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_343278 |
| Sequence | GTTTGTAGTGCAATGATTGAAATAGTGAATAAACTCAATGAAGAAAATGGGAAAGTACAAAATAGCATTTGGTGTATGATCTTATATTATTCTACAATCA CTCAAAAATCTTGAGATTCTGAAGTTTTATCTTTTGCTTTCTTTGTTTGGTAATTTCCCTGCTCCTATCACACCAAGAAAACAAAGAATGGGTGCAACAT GGATCACAAGTGCTACTATCATATCTGTAATAGTGATAGCTTCTCTGATATGGGTATGGAAGGTGCTGAACTGGTTATGGCTGAGGCCAAAGAAACTTGA GAGAATGTTAAGAGAAGAAGGACTTAAAGGCAATCCTTATAGGATTTTGGTTGGAGATATAAGTGAAATGTTGAAGATGGAAAAGGAAGCCAAATACAAA CCTATGACTCTTTCTCATGATATAGTACAACATGTGTTACCCTTTGTCTATCAAAGTGTAAACAAACAACTTTGGTTTGCTTCCAATTGTTGCATTGTTA ACCCAGTGGGATTGTGGACTTTAGAAAAATCTCTAAGTTCTCATAAAAATGTATAGCCAGAGATACAATTCAACTTAAATTGGATTTGTCAACATCTGTT GTGAGGTTAAGTATATAGGCTATGCATTTGTGTAAATCAGTGGTTTCCTGATCATGAGATTAATCTGTTGTCTTAGTTCCCTGCATGCAGAAAACTAGCA TAAATGGCAATTTCCGCAAACCAAAATGTGGAGAATTGAGCTTATTTTTTATTAGCTTCATTGATGTAACACATGATTAGATTTTTTTGATGAAACTAAG CTAATGCACCCTTCAGCAATGAAACATTATCTTAATCAAAGCTAGCAAAGTAATAAGTCAATCTGTTGGTAGCAAACAACTTTGGTTTTGAACATATATT GGGGGGTGGGGGTGTACGAGCTTATAGAGAGTTCATTTAAGCTTCAACAGATTATGAAAACAACTTATGAACTATAAGCTCTTTTTAGCTTATTCCAATA AACTTCCTAGAGAAGTTTACGAAAATACATTGTTTTTAGCTTATTTCATTTAGCTTCTCATATAAGCTTATGAAAATAAGATACTTCTAACTTTTTCTAA AATACCTTATTGAATAAGTATTTATTGAACTCTTTATCGAAAATCCCCCTAAATCGAAAAGGCTTGCATCAGTCTATGGAGTTGAAATTGATTGTTTTCA GCCATAGTATATTAAGAGGTTTAGTATACACTTTGTTGTAAATTTCTATTGAGAGCATCCAGACTCCAGAGTAAGAAATGGAAATAGTACAACAAATAAA CAAAACCAAGCTCAAATCTTTCAGTTAAGCCCTTAACTAAAGATCACTTAAATGCACTTAGAAAAGAAACAAACTTTTGATAAATGCACAACTTGAAAAA AATCCAAGACACAGAAAAAAGGTTCAATCATTTTCAACAAAATCAAAAGCACAAACCTTGCAAGTTCTCCATGTAGCTGATCTTAAAAGGGATATTTCCA GAGAAATGATTGATATTCAAATACTAATCAACTAGCTCAGTCAAGTTAGCAAGCTCTCTTGGTATCTCACCATACAAAGAATTATAATGCAAATAGAGTC CTTCTGCATTTATGTTCTCTATTATGCACTGTTTTTTTAACTTGATGCTCTATCAACCTCCTTCTGCAGCTCAAGTTTAAAAATTCTGTGTTAATATTCA GATTTTAGGACTGTTATTTGGAATAATACTATATCATGATCTAAATTATGAATTTGTTACCATTTTTTGTTGTAAATGCTTAACCTATACATTGTATAAT TGAGTCTTAGGAGTGACAGTGTGATGTTGTTGGCCATATGTTTGTTGATTAACCATTGAATGCATGATTGAAGTTGATGTTTTATGTAGGGATGTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_173086; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343278
| Blastp | Secologanin synthase from Catharanthus with 43.53% of identity |
|---|---|
| Blastx | Secologanin synthase from Catharanthus with 47.06% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AAA33106) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453527.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |