| Id Trinity | TRINITY_DN49896_c3_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_342012 |
| Sequence | AAGACGACCATAGTTTATTCGGGCTTTTTTGTATAAAAAGAAAATACACATTCTCTTCCCTCAAAATCTCACTCATACTAGTGTTATCTTTCATGTAGCA GCTACGACCTAACACAAAGCTTCTTCAATCAAAGGATTCTCATAGGGTAACACTCACTAAATTTTTTTCTCAATGTAAAATTTCCCCTTTTTATTTTTTT CTTATAATTATATACTTGTAGTGATTTCTCAAGATTGGTTAGAACTGAACGAATTGTGGGGTTCATCTATTTTCTGTAAAATCTCTGCTTGATATTATTT TCTTCTAGGGTTTTTATTGCAAATAATTTTTTTTATGAAATAATCTTCAAGATTGCATGTTTTGTGTTTTTATGCAGAAAATGAGGGTTTGAAATTGACA ACTTTTTCTGGGTGGAAGGAGATATTTGAATCAGATTTTGGGGTGATTTTTGTTTTAGTGAAGAGGAGATAAGTTTCCAGCTTGTGAAGCTTTTGATTTT GTGTGTTTGGTTGAAAAGTGTTTTGCAATGGAAGAAAGGCTAGGCCAGAACTCGGTTCCTGCATCACATCCTATTGATAAGTATAAGATTCTGGATGTTA AACCGATTCGTAGTATGATACCTGTGTTCTCGATGCCTCCTCAAGGTTCAGCCTCCGGGGAGTATCCTTCCGGGTTTACTCCGTTTTTCCCATTTGGTGG ACCTCAGCAAACACCGTCTAGGGGTGTTGCCACACCAGCTCCATTACGTGCGTATAGGGCTAGGGACACTGATGGTTTCAACGATCATGGAGCGTCATAT TCCCGTGACTCGCAATCATCGAAAAGGAAGCATGGTAAGAGAACTCCGGTGGTGCTTACGGATTCGGGTTTTTTAGTTGGTATTACCCCAGATCTAAGAG AAGACGGGAATCGTGATGTGGTTAATCTTATACTCATGACATTTGATGCATTTCGAAGAAGGCTCTGCCAACTTGAAGATGCCAAGGAATTGATCGCGGG TTCAATCAAGCGTGCAGATTTAAAAGCTTGCAATACTTTGATGATGAAAGGGATTCGTACAAATATGAGGAAGAGAGTAGGAGTGGTGCCCGGGGTTGAG ATTGGAGACATTTTCTTCTTCCGAATGGAATTATGTATTGTCGGTTTGCATTCTCAATCCATGGGTGGAATTGATGCCATGCATGTCAGAGGTGAATCTG AGGAGGAGACTCTGGCCGTAAGCATAGTTTCATCAGGAGAGTACGATGATGAGGCAGAGGATGATGATGTTATAATTTACACTGGCCAGGGTGGGAACTT CAACAAGAAAGGTAAGCATGTGAAGGATCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGACAGAAGTTCACGGCAACACAATGAAATAAGAGTCATCAGA GGTATAAGAGAGGGCGTGAATCAAAATTCAAAAATCTATGTCTATGATGGTTTGTATAAAATCCAAGATTCGTGGATGGATAGAGCAAAAAGTGGCGGCG GTGGCGTATTTAAGTATAAGTTGGTGAAAGTGCCTGGTCAGGCAAGTGCCATTGCTATTTGGAAATCAGTTCAGAAGTGGAAGTCAGGCTTCCCTTCAAG GACTGGACTTATTCTTGCCGACCTCTCATCAGGAGCTGAGAGTATTCCCGTAACACTTGTCAATGATGTTGATAATGAGAAAGCGCCTGCTTTTTTCACT TATTTTCATTCTCTTAGACATCCGAAATCATTCAGTTTAATGCAACCTTCACACGGCTGCAACTGTACTAAAGCATGTATCCCTGGTGATGTGAACTGCG CTTGCATTGTAAAAAATGGAGGTGATTTTCCGTATACTGGCAATGGCATTCTGGTGGGTCGGAAGCAATTGGTTTATGAATGTGGGCCCACTTGTCAATG TTTTCCTAACTGCAAAAATCGAGCATCCCAGACTGGTTTGAAGCACCACTTGGAAGTCTTCAAAACAAAGGATAGAGGTTGGGGTCTTCGATCACTCGAT CCTATTCGTTCTGGCTCTTTTATTTGTGAGTATGCCGGAGAAGTTATTGACAAAGCCAAGTTAAGCCAGCTGGTGATGGAAAGAGATGATGACTATGTTT TTGATACAACCCATATTTTTGATACATTCAAGTGGAATTACGAGCCTAGGTTACTAGAAGAAGAGAGTACAAATGATGCTAGTGAGGATTACGCTTTACC GTATCCTCTAATTATAAGTGCCAAGATTGTCGGAAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAACCTGTCTTATATGAA GAAAACAATCAATCCTTCCTACATGTTGCATTTTTTGCACTCAGGCACATTCCCCCAATGACAGAGTTAACATATGATTATGGATTTTCTCGTGATGAGG GTAGCAATGCACCCAAAGGTCGAAAGAAATGCTTATGTGGATCATCGAAATGTCGTGGTTCTTATGGTTGACATTTTCATACAATTGCTCACACACGAGC TGGCATATGTCCTTGCGGCTAAAGAGGTACTACCACAAGGCTCTCTTTCATCTTTCATATTCCTTATCTATTCATATCAGAACATTGTAATGTTTTATTA GAGATGAACCCGTTTCATTTTCGAACTTTTCAGTTTCTTTTGTATGTTTTATTAAAGATGATGATACATTAGAAATTTATGGTTTTTCGTGTCAAATGCT TGTTGCAAGGTTAAATCTGTTAACTTTACATTTTATCCACAAACTTTTAATCTGAAGAACCGAAACACTAAAGCCGGATAAAATTTAACTTAGTGATGTA TAAAGGCATGCATCATGGTTCATTATTATGATATTGTTACTTAAAGGTATGTTGGATGTTTCATTTTTATGATTTCTGTATATTAAACTCGCATGTTTGG ACATGCGTCACTTAAACGTACACTGTCCGATCGGCTCGGGCTCGGGCCATGTGGTATATTTCTTTTTATTTTGGTGAGGCCGTGGTTGATAGCCTACTTG CACAATTTTTTACAGTACCACAAAACCACTGAAAGAGAGCAACCTAATCTGCAGCTCATCCAATAATTTTTCGGTGCCGTAAATTGTTTTTTAATCCGTT TCGAACAATTTTAAGAAACACAGGTCACAGGTGGATGATAGCATTCAAGTTCAAGAGTTAGATGAAGTTTAGAAGTTCCAGCTTTGTGGATGCATGCTTC AAAATATCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_173092; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_342012
| Blastp | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 from Arabidopsis with 51.38% of identity |
|---|---|
| Blastx | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 from Arabidopsis with 57.66% of identity |
| Eggnog | Histone-lysine N-methyltransferase(COG2940) |
| Kegg | Link to kegg annotations (AT1G73100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419503.1) |
| Pfam | SAD/SRA domain (PF02182.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |