Ll_transcript_342023

• Id Trinity: TRINITY_DN49896_c3_g2_i10
• Name Transcript: Ll_transcript_342023
• Sequence: GTTCCAAATCACTGTTTGGTACTTCGTAGTTCGTACCACAAAACAAAACCCATTATTTTCTCTTTCTTGTAGCAGATTCATTCATCCATGACCTAGCACA AATCTTCATCAATCAAAGGACTCTTATAAGGTTATTTCTCTGTGAGCTTAGTTGAAAAGGGTTTTTTTTGCAATGGAAGAAAGGGTAGGCCAAAACTCAG TTCCTCCTGCAGGTTCTATTGATAAGTATAAGATTCTGGATGTTAAACCTATGCGTAGTATGATACCTGTGTTCTCAATGTCTCCTCAAGCTCCAATCTC TGGTGAGTATCCTTCAGGGTTTAATCCATTTTTCCCATTTGGTGGACCTCAGCCACCAGCAGCAAGGGTTGCTGTCACACCAGCTCCGTTACGAGCTTAT AGGGCTGGAGAAACATCTGGTTTCAGCATTTCGGGTACCAAGAAACATGCAGCATCACATTCCAAATCATCCAAAAAGAAGTATGTTGACAGAACTCCGG TGGTATATACTGATATGGGTTTTTTAGTTGGCATTACCCCGCCTCTGAGAGAAGACGGTAATCGTGATGTGGTTAATCTTATACTCATGACATTTGATGC ACTTCGTAGAAGGCTCTGCCAACTTGAAGATGCCAAGCAATTGAGCACTGGTATAATCAAGCGTGCAGATTTAAAAGCTTGCAATAATTTGATGAGCAAA GGGATTCGGACAAACCAGAGGAAGAGAGTAGGCGTAGTGCCTGGGGTTGAGGTTGGGGACATTTTCTTCTTCCGAATGGAACTATGTATTGTTGGTTTGC ATGCTCAATCCATGGGTGGAATTGACTCCTTGCATATCAGAGGTGAGTTTGAGGAGGAAACTCTGGCAATAAGCATTGTTTCATCCGGAGAATATGATGA CGAGGCAGAGGATAATGATGTTTTAATTTATACCGGTCAAGGTGAGAACTTCAACAAGAAAGACAAGCACCTGACAGATCAGAAGCTTCAAAGGGGTAAT CTTGCTTTGGATAGAAGTTCGCGACAACATAATGAAGTAAGAGTCATCCGAGGTATAAGAGAGGGTGTGAATCAAACTTCAAAAATCTATGTCTATGATG GTCTGTATAAAATCGAAGATTCATGGGTGGATAGAGCAAAAAGCGGCGGCGGCGGTGTATTTAAATATAAGTTGGTGAGAATTCCTGGACAACCTAGTGG CTTTTCCGTTTGGAAATCTATTCGGAAGTGGAAGTCTGGCTTCCCTTCAAGGACTGGACTTATTCTTGCTGACCTCTCCCCAGGAGCTGAGAGTATTCCT GTATCACTTGTCAATGACATTGATAATGAGAAGGCACCTGCTTATTTCACATATTTCCAATCTCTTAGACATCCGAAATCATTCAATTTAATGCAGCCTT CACACGGCTGCAACTGTGCGAAAGCATGTGCCCCTGGTGATTTGAACTGCTCTTGCATTAGAACAACTGATGGTGATTTTCCATATATCAGCAATGGCGT TCTTGTGAGTCGGAAGCAATTGGTTCATGAATGCGGCCCCTCATGTCAGTGTTCTCCTAACTGCAAAAATCGAGCATCCCAGTCTGGTTTGAAGTACCAC ATGGAAGTGTTTAAAACAACGGATAGAGGTTGGGGTCTTCGATCACTGGATCCTATTCGTGCTGGATCTTTTATTTGTGAGTATGCAGGAGAAGTTATTG ACAGGGTCAAGTTAAGTCAACTTGTGAGGGAAAGAGATGATGACTATGTTTTCGACACAACCCGAAGTTTTGATACATTCAAGTGGAATTATGAGCCTAG GATACTGGAAGAAGTGAGTGCAAACGACTCCAGTGAGGACTATGCTTTACCGTATCCTCTAATTGTAACTGCCAAGAGTGTCGGAAATGTGGCTAGATTC ATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAACCTGTCTTATATGAAGAAAACAATCAATCCTTCCTACATGTTGCATTTTTTGCACTCAGGCACA TTCCCCCGCTGACAGAGTTGACATATGATTATGGAATTTCCGGTGCTGAGGGTAGCAGTGCGCAGAAAGGGGGGAGAAAGAAATGCTTTTGTGGATCATC AAAATGTCGTGGTTCTTTTGGTTGACTTTTTCATACAATTGCTCACAGACAGGCATATGCAGTATTGGCTAAAAAGATTGATGGTGACATTCTACTTCAA GACCTAGATCCAGTTTAGTGGATGCATGCTTCAAAATATCAATGTCTGTTTTTGGCTATGGCCCCTTCTTTGTGATAAATAGTCAGTGAAGTTGTATGAG TATGATACACTAGACAAGCTTATAACTAGACCTATGCATCCACATGTTTATCTCTACTTTGTTCTCTTGACTTGGATATTTTGTTGTGTAATTATGTTCC TCAGAAGTCTGTAACCTTTTCTCTTCATATTTGGGATTGTAGAAGCCAACTTGTGAAACTAAGGTATGGATCATATTCTATGGTTATTGCATTTTCCAGG GTCCTTTCATGACTCATGGTGGAGTGAACTGAGTTCCACTTCTGTTATTTATTAATTAGAATTTTCCTTGCGAAGTGATTACTGCTGAATGGTATTTGGA ATCTTCATTCCAATGTATGGATTCTTGT
• Tissue: pods
• Gene name: LI_gene_173092;
• Additional information: details;

Expression of Ll_transcript_342023

FPKM

• PAB: 19.1
• PNAB: 36.4
• PS1: 44.8
• PS2: 21.2
• PS3: 32.4
• PW1: 27.2
• PW2: 25
• PW3: 20.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_342023

• Blastp: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 from Arabidopsis with 51.25% of identity
• Blastx: Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 from Arabidopsis with 59.7% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (AT1G73100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440773.1)
• Pfam: SAD/SRA domain (PF02182.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;