Id Trinity | TRINITY_DN49897_c3_g3_i1 |
---|---|
Name Transcript | Ll_transcript_343718 |
Sequence | GTTGGTAATTAAGTTAAATAATTTCACTGTTGGGTTGACAACAACAACCTTAACTATTTTGTTAATAATAATATAATCTTAATCCTTTTATCATGTAAAA TGTTAAAACACAGTTTGAACTGAATTGTTGGATCTGAATTGGTAAGATTGAAGAATCAGAAGAAAACATGGCAACGATGGGAAGAGCAAGTTCTGGATTG CAATACCCAGAACGGTTTTATGCTGCAGCTTCTTATGTGGGTTTTGATGGATCTACTTCTCCCACTAAATCTAAGTTCCCAAATTCTACTGCTCTTCTAC TCTACACATTATATAAGCAGGCTACTATAGGACCTTGTAACATCCCAGAACCCAGCACATGGAAAATTGTCGATCATAGCAAATGGGCCAGTTGGAACCA ACTTGGAAACATGTCTTCCACAGAAGCCATGCGTCTTTTTGTAAAAATATTAGAGGAAGAAGATCCTGGTTGGTATTCAAGAGCATCTAACTCTGTTGTA GAGCCTGTAATAGATGTGCAAATTAATCATAATTCCAAAGTTGAACCAGTAATCGAGAATGGCAACTCTTATCCAGAGATAAAGACCATTTCGGCTGAAA ATGGAAGTCAAGTTACACAGGACAAAGATGTTGTTGTGGAAGGCTTTGGTTCAGTTGTAGTTTGTGATGAATGGATTGCACCTCCAGTATCCGGTCAACG TCCAAAAGCCCGATATGAGCACGGAGCTGCAGTTGTGCAAGATAAATTGTATTTATATGGTGGAAACCACAATGGCCGTTACCTTAGTGATCTTCATGTT CTAGATTTGAGAAGTTTGGCTTGGTCAAAGATTGAGGCTAAGGCTGGAGCTGAGTCCCCATTAACTTTATCCCCTTGTGCAGGCCATTCTTTGGTTCCAT GGGGGAATAAGCTTCTGTCTGTTGCTGGGCATACAAAGGATCCTTCCGAAGTTATCCAAGTGAAAGCTTTTGATTTGCAAACTTCAACTTGGTCAGATCT GAAGACTTATGGGAAATCCCCGGTATCACGTGGAGGGCAATCTGTGAACCTTGTTGGATCAAGCTTAATAGTTTTTGGTGGACAAGATGCTAAGAGGACT CTCTTGAATGATCTGCATATTCTCGACTTGGAAACCCTAACATGGGATGAAATTGATGCTGTTGGGGTACCTCCTTCTCCAAGATCTGATCATACTGCTG CTGTACATGTGGAGCGATACTTACTTATCTTTGGTGGAGGTTCACATGCAACTTGCTTCAATGACTTACATGTTCTCGATTTGCAAACTATGGAATGGTC TAGACCCATACAACAGGGTGAAATACCTACGCCACGTGCTGGACATGCCGGTGTAACTGTAGGGGAGAACTGGTTCATTGTTGGCGGTGGTGACAATAAG AGTGGTATGATTTTTGGCACCTTCTTACTTAGATTCAAATTTTTTGTTGACATTTAATTACAAGTTTTTACTATGCAAGATGTTTCTTGATATTTTGAAC AAATGGTATCTGAAATTCTGGCATACATGTAAATACTGTGGGTCAAAAAAAAATTCCGGTCTAGTGCACAAGGCTTCCACAAGCGAAGAGGTTGTTTATG GAATTTGGATCTGTGATCTATTGGCCACTAAGCAACAACCTTACTGTTGCGCTGTGGCTCACCCTCACCGTGGACCAAACTAAACCAAAGAAATTATATT TGTGGTGAAAGATTGAGTTCTGTTTGGTTAAACAAAACTAAATTACCAAAACGGACGTTGGTTCAAGTGGTACATGCTTGATTCCCCTTAAGCAAGGTCT CGGGTTCAAACCTTGTGGATGGAAAAATGTCCGTTGAAAGAGTTAGCCCCACATACCTGTGAATGTTCCTGGCTCGGACAGGATTGTCCCCCGTGCGAGG ATACCTGTGGGAAACAAAAAAAAAACAAAACTAAATTACTTTGAGTGTGAATTTGCTAAAATAAGACCTAAATATGTATTTCTCCCTGTACACTTGATGT TATTATGTTTTAGTCCCTATTTAGCTTTTATTCATTTTTACTTCCTCATTTTACCAAAAGTAGTGTGTTTTTAAACCCCTCCCCCGGAATTGAAACGAAT AAATTTAAATAGGGACCAAAAACAAGAGAAATCATATTGACAAGGACCTAAAAGATATTTATACACTAAAATAAAGGAGATCAGTTGCCATTTTTTGCTG CCTTCATGGTTATAACCGATTTTGGAGTTACATTAACAGGTGTAAGTTCATGTCAGTAAAAAGGGCAGTAGAAGGTATGCTTACTGTTTTCATTGTGAAA TTAAGTTATTTGGGAAAGGCATTGCTGTTTAATTCGGATCACTGTGAAGGTGAATAACTTCTGGTGTAGATATTATATATCTATAATAAAAATCAGTTTC ACCTTTTCGCTCTACTCTCTCTTTTCTATCTAGCTCATTTTACATTTCTCACATTGCCATATATCTCTTTTACGAGTTATATCCCATGCGCAGGGGTTTC AGAGACAGTTGTGCTGAATATGTCTACACTGACTTGGTCAGTGGTAACTTCTGTTCAAGGGCGTATTCCGGTTGCTAGTGAGGGTTTGAGTTTGGTTGTA AGCTCCTTTAATGGTGAAGATGTACTTGTATCTTTCGGAGGATATAATGGACGCTACAATAATGATGTCTATGTTCTTAAGCCAAGCCACAAATCAGCAG TACAACCGAAGAAAATTGAAACTTCCATACCAGACAGTGTTTCGGCTGTCCAAAATGTCACAAATACCCCAGATGTGGAGTCAGAATTAGAAGCCTTTGC TTCTTTGGCTGAAAAGAAACCAAAAGGAGATCTTATATCAATTTTGAAGGCTGAGAGAGAAGAGTTGGAATCATCACTCGGCAAGGAGAAGCTACAGACT CTTCAACTAAAACAAGAGCTGGGAGAAGCTGAGTCTCGTAACTCTGACCTTTACAAGGAACTCCAATCGGTACGAGGTCAGCTTGCTGCTGAGCAGTCAA GGTGTTTCAAACTTGAGGTGGAGGTTGCTGAGTTAGGTCAGAAGCTCCAAACAATTGGAACATTACAGAAGGAGCTTGAACTCCTCCAGCGGCAAAAGGC GGCGTCGGAGCAAGCTGCCGTAAATGCAAAACAGAGGCAGAGTTCAGGTGGTGTTTGGGGTTGGCTTGCTGGTACTCCTGGCCAGAAAGAAGATGATGAT GATGATGAGTGA BLAST |
Tissue | pods |
Gene name | LI_gene_173101; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343718
Blastp | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 72.79% of identity |
---|---|
Blastx | Acyl-CoA-binding domain-containing protein 4 from Arabidopsis with 72.79% of identity |
Eggnog | Kelch domain containing(ENOG410Y5WM) |
Kegg | Link to kegg annotations (AT3G05420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423018.1) |
Pfam | Acyl CoA binding protein (PF00887.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |