| Id Trinity | TRINITY_DN49900_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_458184 |
| Sequence | CTAAAAAGAGGAGAGGAGAGGGTCGAAATTTTATTTTAATTCCATTAAATATCCAAACATGAAGGGAAAGAAGCTACTTCACTCATCTGTGAGGAAGAGG AACAAAACAAGTGTGTTTCATATCTGAGACTGGCATTGGAAAAATGCTTCTCTTAACATCATCATCATTCTCATCATTTTCTTTCCTTCCACTTTCTCTC CCTCCACTTTCCATTCTCCCTTCTTCTTCTTTTTCTTCTTCATATCGCTCTTCTTCACTAACTACATCCCCATTTCGTTTCCATACCCCACCATCCATTT TCTGTTCCATTTCTTCATCTTCTCCTTCTTTGGAGCAACAACAACAACAACAACATTCTGTTTCATTTTCTCAGATGCAAAATAACTTATTGCACTCCAG AGCTTATTGGGTTGGTGAATCTGTGATTGCTTGGAACGTTGATGATGTTGGAAAGGAGGGGTTTTGCTACCTACTTTCTAGCAAACATGCTTCGCTGAGC ATTTCAAATTGTCAAATTCAAGGTGAGGATGTGAAAATTAAGCTTCAAGAGGATAGGGCTGGCCTTCCTGCAAATGTGGTAGAGAAGTTTCCTCATATTC GAGGCTACCGAACTTTCAAGCTGCCACCCAATTTGGACGTTAAATCTCTTCTTAAATCTCAGCTAGCGGTTTCTATTTATGATTCTGACGAGAGATGCAG GAATTGTACTGGTTTGCAGTTACCTGGTGTTTTAGATGAGCTTTACTCTTATAATGGTCCCCTTGGTGCACATTACTCGGAAGAAGCTATATCGCTTTAC CTGTGGGCGCCTACTGCTCATGCAGTAGATGCTTACATCTACAAGGATCCTTCAGGAGATGATCCTGTAGAAATTGTTCACCTTGAGGAGGAACATGGTG TATGGATAACAAAAGGACCAAAAAGTTGGGAAGGCTGTTATTATGTTTATGAAGTAACTGTTTACCATCCTAGTACTTTGCGGGTCGAAAAATGCTATGC AAATGATCCATATGCTAGAGGACTTTCTCCAGATGGCAGGCGAACTTTTCTGGTTAATCTTGACTTTGATCAGCTAAAACCCGATGGATGGGATAATCTG GCAAATGAGAAACCTGTTATACATTCTTTCTCTGATATAAGTATATATGAAATGCATGTAAGGGATTTCAGTGCCAATGACCACTCTGTGCAACCTGAAT TTCGTGGTGGTTATCTGGCCTTCACACTGCTGGATTCAGCAGGTGTGCTTCATCTAAAGAAATTATCAAGTGCTGGTATCACCCATGTGCATCTATTGCC AACTTTTCAGTTTGCCGGGGTTGATGATCAAAAGGAGAACTGGAGATCTGCTGGTAACATTATATTAAATATTATCCTCTGAATATGCTGTTGTTTCATG GTTAATAGCACCCTTCACTTTTTTACATGCTTAACGGAATTTCTACTTCTTGAATGGTGGTCATATTTGGGCTTTTATCCTTATAGATCCGACTTTTTTC AGTGTTTGTAACTAATTTAATAATTAGCAATAGCGGTAATATAACTAAATAGATGTAAAAACGAATGCTACATAATATCTATTTTTAGAGATTGAGCTAA GTTCCTCCCTGACGTACCCACCAGAGGCTTCCTTCTTCAGGGAAACATTATCTTTTAATTACTGCTTTGTCTTCAATTACATACCTCTGGTCTATGAAGG CATTTACAAATTTTAAGGCCCATTTAATATTTATGCCATTCTTCAATCATGCAGCTTGTTATCCATTGTTTTGTATACATATAATAAATAATATACACAA ACGTGCTCATTTTCTAGTCTATTTTTCTACCCTTTGTGCTAAATTGCTAATGATACACATAACACTGTCATGCATGTCTATATGAATTTTTTAATGTCTG TCTGTCTTCTCATTATCTCATATAGTCACCCAGCATGACACCTCTTAGTTTTTATTATTTTTGAAAACTTGATTGCTAACATTCTTGTTTTTAAGCTTAT GGTTGGTATATGGTAATTTATGTGCTCATGATTATATTTGCTTGATTTATCTTAAGTTTGTTATCTTACATAAGCTCTCTGATAGATACCTCGATACTGG AAAGTTTGCCACCAGATTCGGATCAGCAACAAGCTCTTATTACTGCCATCCAAAACTTTGACGGATATAACTGGGGGTAATCTCCCAAGTGCCACACTGG TTGACAATTTCAACATTTGTTTAGGGTAAAGTTTGCTTATTTGTGTTGGTTTTAAAAAGGTACAACCCTGTTCTTTGGGGCGTTCCTAAAGGCAGTTATG CAAGTAATCCAAATGGTCCATGCCGTACAATTGAGTTCCGTAAGATGGTTCAGGTCTGAATTCACTTTTTCTTGAACGGATGTTATTATCCATGGATCTA GTTTTCTGTCTAATTTTGCAATGTGGACCAGTAATACTATGCTTGGTCAAGTGTATAGTCAGGTAAATTGTTTTTTTATTTGTCTATCAATTTATGTACA TCACAGGCTCTCAACCGAATTGGCCTTCGGGTTGTGTTGGATGTTGTCTACAATCATCTGCAAGGAAGCGGGCCAATAGATGAACATTCTGTGCTTGATA AGGTCATGAATTATCATGGCATTTTCTTTGTTGTCCTGTTATGTTTAGATATGCATATCTGTCCTATTGATTATTGCTTCATTAATTTGTAAGACTTATC TGCTGTCATGGTGTGACATGGTGTATCTTATAGATTGTTCCAGGCTACTATCTTAGAAGGAATGCTGATGGTTCCAATGAAAACAGTACTTGTATGAATA ACACTGCGAGTGAACACTTTATGGTTGAGCGTTTGATCCTTGATGATCTTGTACACTGGGCAGTCAATTACAAGGTTGCTGGGTTCAGATTTGACCTTAT GGGTCATATAATGAAGAGCACTATGGTGAAAGCAAAAAATGCTCTCCATTGTTTGACAAAAGAAAAGGATGGGGTTGATGGTTCAAGCATCTATATATAT GGTGAAGGATGGGACTTTGGTGAAGTTGCCAAAAATGGGCGTGGGGTAAATGCTTCTCAGTTCAATCTCTCAGAAACAGGAATTGGATGCTTTAATGATC GAATTCGAGATGCCTTACTTGGTGGATCTCCATTTGGCCACCCTCTCCAGCAAGGTTTTGTGACTGGTCTGCTATTGCAGCCTAATGGTCATGATCATGG TACAGAAGCTAATGCAGAATCCATGCTTGCTGCGTCAAAGGATCATATCCAGATTGGAATGGCTGCAAACTTGCGAGATTTTGTGCTAACCAATTCTAAT GGAGAAGAGGTAAAAGTTTCAAGATTTTAAAAATTAGATGTAAATGAAGGCTGTGGTGGAGAGTAGGAAAGGTGGAAGTTGTGGCGATGACGGTCATGGT GGTGGCTGGAGTTGTTACACCAAATGCATGTGAAAGGGTCAGAAGTGCTAGCATATGGTGGGACGCCTGTTGCATTTGCGTCGTGCCCTACAGAGACTGT CAATTATGTTTCGGCTCATGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_173125; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458184
| Blastp | Pullulanase 1, chloroplastic from Arabidopsis with 64.26% of identity |
|---|---|
| Blastx | Pullulanase 1, chloroplastic from Arabidopsis with 65.73% of identity |
| Eggnog | Glycogen debranching enzyme(COG1523) |
| Kegg | Link to kegg annotations (AT5G04360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461050.1) |
| Pfam | Carbohydrate-binding module 48 (Isoamylase N-terminal domain) (PF02922.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |