Id Trinity | TRINITY_DN49900_c0_g1_i14 |
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Name Transcript | Ll_transcript_458189 |
Sequence | CTAAAAAGAGGAGAGGAGAGGGTCGAAATTTTATTTTAATTCCATTAAATATCCAAACATGAAGGGAAAGAAGCTACTTCACTCATCTGTGAGGAAGAGG AACAAAACAAGTGTGTTTCATATCTGAGACTGGCATTGGAAAAATGCTTCTCTTAACATCATCATCATTCTCATCATTTTCTTTCCTTCCACTTTCTCTC CCTCCACTTTCCATTCTCCCTTCTTCTTCTTTTTCTTCTTCATATCGCTCTTCTTCACTAACTACATCCCCATTTCGTTTCCATACCCCACCATCCATTT TCTGTTCCATTTCTTCATCTTCTCCTTCTTTGGAGCAACAACAACAACAACAACATTCTGTTTCATTTTCTCAGATGCAAAATAACTTATTGCACTCCAG AGCTTATTGGGTTGGTGAATCTGTGATTGCTTGGAACGTTGATGATGTTGGAAAGGAGGGGTTTTGCTACCTACTTTCTAGCAAACATGCTTCGCTGAGC ATTTCAAATTGTCAAATTCAAGGTGAGGATGTGAAAATTAAGCTTCAAGAGGATAGGGCTGGCCTTCCTGCAAATGTGGTAGAGAAGTTTCCTCATATTC GAGGCTACCGAACTTTCAAGCTGCCACCCAATTTGGACGTTAAATCTCTTCTTAAATCTCAGCTAGCGGTTTCTATTTATGATTCTGACGAGAGATGCAG GAATTGTACTGGTTTGCAGTTACCTGGTGTTTTAGATGAGCTTTACTCTTATAATGGTCCCCTTGGTGCACATTACTCGGAAGAAGCTATATCGCTTTAC CTGTGGGCGCCTACTGCTCATGCAGTAGATGCTTACATCTACAAGGATCCTTCAGGAGATGATCCTGTAGAAATTGTTCACCTTGAGGAGGAACATGGTG TATGGATAACAAAAGGACCAAAAAGTTGGGAAGGCTGTTATTATGTTTATGAAGTAACTGTTTACCATCCTAGTACTTTGCGGGTCGAAAAATGCTATGC AAATGATCCATATGCTAGAGGACTTTCTCCAGATGGCAGGCGAACTTTTCTGGTTAATCTTGACTTTGATCAGCTAAAACCCGATGGATGGGATAATCTG GCAAATGAGAAACCTGTTATACATTCTTTCTCTGATATAAGTATATATGAAATGCATGTAAGGGATTTCAGTGCCAATGACCACTCTGTGCAACCTGAAT TTCGTGGTGGTTATCTGGCCTTCACACTGCTGGATTCAGCAGGTGTGCTTCATCTAAAGAAATTATCAAGTGCTGGTATCACCCATGTGCATCTATTGCC AACTTTTCAGTTTGCCGGGGTTGATGATCAAAAGGAGAACTGGAGATCTGCTGATACCTCGATACTGGAAAGTTTGCCACCAGATTCGGATCAGCAACAA GCTCTTATTACTGCCATCCAAAACTTTGACGGATATAACTGGGGGTACAACCCTGTTCTTTGGGGCGTTCCTAAAGGCAGTTATGCAAGTAATCCAAATG GTCCATGCCGTACAATTGAGTTCCGTAAGATGGTTCAGGCTCTCAACCGAATTGGCCTTCGGGTTGTGTTGGATGTTGTCTACAATCATCTGCAAGGAAG CGGGCCAATAGATGAACATTCTGTGCTTGATAAGATTGTTCCAGGCTACTATCTTAGAAGGAATGCTGATGGTTCCAATGAAAACAGTACTTGTATGAAT AACACTGCGAGTGAACACTTTATGGTTGAGCGTTTGATCCTTGATGATCTTGTACACTGGGCAGTCAATTACAAGGTTGCTGGGTTCAGATTTGACCTTA TGGGTCATATAATGAAGAGCACTATGGTGAAAGCAAAAAATGCTCTCCATTGTTTGACAAAAGAAAAGGATGGGGTTGATGGTTCAAGCATCTATATATA TGGTGAAGGATGGGACTTTGGTGAAGTTGCCAAAAATGGGCGTGGGGTAAATGCTTCTCAGTTCAATCTCTCAGAAACAGGAATTGGATGCTTTAATGAT CGAATTCGAGATGCCTTACTTGGTGGATCTCCATTTGGCCACCCTCTCCAGCAAGGTTTTGTGACTGGTCTGCTATTGCAGCCTAATGGTCATGATCATG GTACAGAAGCTAATGCAGAATCCATGCTTGCTGCGTCAAAGGATCATATCCAGATTGGAATGGCTGCAAACTTGCGAGATTTTGTGCTAACCAATTCTAA TGGAGAAGAGGTGAAAGGGTCAGAAGTGCTAGCATATGGTGGGACGCCTGTTGCATTTGCGTCGTGCCCTACAGAGACTGTCAATTATGTTTCGGCTCAT GACAATGAAACACTATTTGACATCGTGAGCTTGAAGACACTGATGGATATCTCTGTAGATGAGAGATGCAGGATAAACCATTTGGCAACAAGCATTATAG CACTATCGCAGGGCATACCATTTTTTCACTCTGGAGATGAGCTACTCCGCTCAAAATCACTGGATCGGGATTCATATAATTCCGGTGATTGGTTCAATAG GCTTGACTTTACATACAATTCTAATAATTGGGGTGTTGGGCTTCCTCCACGGGACAAAAATGAAAGTAATTGGCCACTAATGAAACCACGACTGGCAGAC CCATCCTTCAGGCCTCAGAAGATTCACATCAATGCTGCTGTGGAGAATTTCTTAAACTTGTTGCGTATACGGTACTCTTCACCACTTTTCTGCCTGAGGA CAGCAAATGCTATCCAGGTGAGTCACTTTATGCTTCATCTTTATCAACAACCAATTATTTCCGTGATATTAAATCTGCTCTACTGCTTAAACATCGATAT TTTGTTCTGTTTCTGATTCTTGGTCATTTCACATTTATTAGTTAATGTACTGTATTTTGAACTAGCAAGAATTAATTAATGTCATTATGTTGTGTTATAT ACACTTATTTAGAGCCTGAAGTGCTTTTGGTGTGAATATTTTTTTCTGGAAAATAACTTGCATCTGTCACAAAACTATGATGTTCACACTGGTGCCAAAC AACCTGTTTGTTAGCTTAGTTTTGAGTTTCATATTGATACTTTTACTGGTTGTAGTAAAAAGGAAAGTGAGTATTTTGGCTGTTGATTTTTTTCTTTTCA GAATGATAATCCCGCACTTTGAATTTTAAAGCATTTAATTCAGCAGCGTTAAAAATAACAATGGTATATATTCATGCTATAATATCTTTGATATTGTAAA ATTTCTCATATCTTTTATCTCTCTCAAATGAGTTCTTTTTCTCTGACAGCCTGTGATGAGATTTTACTTATTTTTTTTGTTGTGTTTTGCTAACATGTGT AGTTGTTCTAAGTTTCTTTGCTAAGGAATTCAAAGTAGAAAGTTTTAAATTTCAATCTTCAATTGATTAAATGTTATGTTTCCATTTAATACTTCCTGTT GTGGGTTCTTGACAAGTGTTTGGGATAACACGTCAAACCCAGGCCCATATCAGTGGATTGTTTATACTACAAGAAAGGAGGGATAGGGCATTAAATTAAG ATAGTAGCTTTCATGTTTGCAGCAACGAGTACGGTTTCACAATACCGGACCATCATGGGTTCGTGGAATCATAGTGATGAGCATTGAAGATGGTCATGAT GGCTTTCCTGGGTTGCCTCAACTGGATCCCATGTATGTTAAAACATATGGCATTTTTTCTTCTAATGACTTAGAACATCCTTTAAACTGGTTTGTTTTGT TGATAACGGTACTTGCAGATATTCGTTCATTGTGGTTGTTTTCAATGCGAGTCCGAAAGAAGTATCATTTGTTAACCCTTCCCTAAAATCAAGAAGTCTC CAGTTGCATCCCGTACAGGTAGAAATAAAGCTTAAGAATTTAAATGATGAAAGTTAAAGTATTTTCATACTGTTTTGGAAAAGGACTTTAGATGTAATAC TCCAGTTTGGTGAATTAGTCAACTTTACTATTAGAAAAACATCTTGAAAGACTTCCAGCTTATGGTATAAGTGAGAAGTGACCTTTCTTTGAGTTCATAT ACTATTTTAGTGTAATATGGTATGGAAGTCTCATATCGTCTAACTCGAGTTAACAATAACGACTTTCCTGTAGACTCCATAAATTTGTTTTCAAAGACAT GAGAAATGATCCCACTGTAGATTGATTCGTGTTACATTTGTTTACTGTATTAGATTTATCCATTTGTAATTTCAGATTGGGTGGTTAGTCACATTGTCTG TTATGTGTTGTAGGTAATGTCCTCTGATGAACTTGTCAAGACTTCAACATACGAGGTGTCTTCTGGTTGTTTTGTTGTGCCTCAAAGGACAACAGCTGTG TTTGTTGAGCCAAGG BLAST |
Tissue | pods |
Gene name | LI_gene_173125; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458189
Blastp | Pullulanase 1, chloroplastic from Arabidopsis with 72.67% of identity |
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Blastx | Pullulanase 1, chloroplastic from Arabidopsis with 72.97% of identity |
Eggnog | Glycogen debranching enzyme(COG1523) |
Kegg | Link to kegg annotations (AT5G04360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461050.1) |
Pfam | Carbohydrate-binding module 48 (Isoamylase N-terminal domain) (PF02922.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |