| Id Trinity | TRINITY_DN49902_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_456687 |
| Sequence | TTTATTGCCACATGTTTCTGCTTTTGAGGATAATTCAGCTATTTCAAGGACTTGTAGCAGAGACATGGCTTCACCAATGGAGAAAAAAGAAACTTTCAAG AAGAGAAAAGGTGAAAAGGATCAAAATTCCAAGGTTGTAGAAGAAAAAGATAACAAAGACAAGAAGATCAAAGTAAGTTATGGTGAAGAGGAATCCAAAA TGACAGAGCAAACCAGTAGGAAGAACACAAAACCAAACACAAGTAAAAACAAGGAAAGTGTTGGCGGTGATAGTTCGAAGGAGAACTCAAAAGAGTCCGA GGCTGAAAATCCAAAGCCTGATTACATTCATGTCCGAGCGCGTCGCGGTCAAGCCACGGATAGTCATAGCTTGGCTGAAAGAGTTAGAAGAGAAAAAATT AGTGAGAGAATGAAGTATTTGCAAGATTTAGTACCAGGCTGCAGCAAAATTACCGGAAAGGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCCC TACAACGACAAGTTGAGGTTAGTTTTGGATCACTCCATTCCTTGCCTTTGACATTACTCTATAAGAAATTAGGCTAATTTGTTTTTATTGTCACATTGGA CAAGTATTTAGGAATTACATAATTCTAGGTATACTTCATGTGTATACAATTTTCATCTTTTCATCACAAATGGGAAATGGCTCATTTTATTCTCTGCATA TTTTGCCATTTACCTAAGATGCTATTAGATGTAGCTTTATCTTTAACTCCGGATAAATCTTGTCGCCGTTACCTGTTAGCACATCTCTCAAGCCTAGAGG CACATGGTAAAACTAAAATATATAAGCAGAGAACAAAATAGGGCCATTTACAACAAAATGGTGAAAGTTATTCAGTCATGAAGTAATGTGTGTAAATATG TGGATGGTATTATTCATAAATACTATATGGTTTGAATATGAAGAGCGATTGAAATACGAGTGACTTACTCTATTAATTTATCACGGCATGCAGTTCTTGT CAATGAAATTAGCAGTTGTAAACCCAAGGCTAGACTTCAACATTGATGATTTGTTTGCCAAAGAGGTAAGAGAAATATAGATACCAGAACTTCTGTAGCT CAATCACATTCTATGACTATGAGCAAAATTACTTAGAACTCGCGTAAGCGTTTTTGTTTGACATACTCTTGAATCTGATACCCTCAGGTATTTCATGCTT GTTCTCCAAGTTTTCCAAACATAGAGATGCAATCAGACATGACTATTAACCCTGCTTATCTTCAGTTCAATCCAGCACAGCTTGTTTCATATCGTGGTGG ATTAATAAACAACCCTTCAGATATGGAGCTTAGAAGGACCACCACTGCACCGGTATATTTGCCTGAAACGTTTATCGATGCATCATCTTGTTTCACTGTA GGTTTCCCCTTTCTGTATTCTTCCCTAGTCTTCTTATTCTAAATGATTAGTTTTGTCCAATTGATCTTTTTTTATGTGCACTACAGCAAATTTTACCTTC ATCAACTTGGGAAGGTGATTTCCAAAACCTTTACAATAATGTTGCTTTTGATCAAGCACGGACACCATCATTTCCTTCTCAACCACTTTCAGGTAGCTAC AAATTCATGACTTGTCGAAACACTTTTTTCCCCTTGGCCCGATATCCTATAAGTAGATTCAAAGAAGAGTCGATTTTCATAGATACGAGAGCCCCACATA TATCGATAAATGGAGAAATTTTTACAAAGGGATTTGATGATCATCTAGTCATGCTACCACTTTTCTTTTATCTGCCTCCTCTTTTTCCCTTTCCCATTAC TTTCACTCCTGGAAAGAGAAAGTAAAGGTTTTTAGCTAAGCTGTTTGTAATACAAGACAAAACTCACTTATGAGACTAGCAAATTAATTAATGTATTTTG TAAAGTAAAATAGGAAAAAAGCTGAAAGCTTCTCTTTTTGATGATGAGGCCCTGGATCATTCTTTTTCTTCAAAGACTTTTAGGCCATTCCACAATCACC TTTATTTTAGACCATGTAAAATTATTTTGAGAGTAGTTAAACTATGCTGCTTGTGAATTCACTTGTTCTATATATTGCAGGTGTGGTTGACAATAGCAAT ATAAAGATGGAGATGTAGAGAAGATCTTGTATTACCATTTATTATATGAGCTCATTCAAGATGCCTCTTATCAAGATTATTTTTTCTTTTCAAGTACATA GCATAAATTGGTTGTATATTACTCTATAGTATAAATAAGATCATTTAAGTACTTGTTAACTTCAGTCACCTTCTTCTGGACTTTATAGTACAACATAACC AAAGGGAGAAAAGTTGATATTGATGAGTAGATGTGACCATGTACCTATCTCAATGTACATAAGAGTGGTGATGGCAATCTTCCACTGCTTTCTTTGTTTT CATCTTTTGTTCTCTCCAAAATCTGAATGTTTGGTGAAAAAATAAGCATACACTCACTATTAATCTAATCTAGTCCATATATTATAGATCTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_173139; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456687
| Blastp | Transcription factor HBI1 from Arabidopsis with 52.94% of identity |
|---|---|
| Blastx | Transcription factor bHLH63 from Arabidopsis with 91.3% of identity |
| Eggnog | basic helix-loop-helix (bHLH) family protein(ENOG411190E) |
| Kegg | Link to kegg annotations (AT2G18300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451429.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |