Id Trinity | TRINITY_DN49907_c1_g1_i6 |
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Name Transcript | Ll_transcript_458620 |
Sequence | AAGGGAACAAAAAACAATGGCAGGAAGATTGACTAACGCAGCATCAAGGATCTTAGGCGGAAACGGCGTCGTTTCAAGATCCGTAGCTTCCTCTCTTCGC CTCCGTTCCGGTATGGGCCTCCCCGTTGGAAAACATATCGTACCTGACAAACCCCTTCCTGCTAGTGATGAACTTGTGTGGGACAATGGTACTCCATATC CTGAACCCTGTATTGATCGTATTGCTGATACTGTTGGAAAGTATGAAGCATTGGCGTGGTTGAGTGGTGGATTGAGTTTTTTTGTGGGTCTGGGAATGTT GGCTGTGTGGAATGACAAAGCCTCCAAGATTCCATTTGTAAGTGCATCGGTTTTTCGGCATCTCGCTTTTGTTATTAGTTTAACGTATTATCTGTCGATT CGATTAATCTGCTTTGATCTATCCTCCGTAGAGGTGATAATGTAATCGAACCACTGGGTACCTGTCTAAGCCCAACCGAATTAGACGGAAAACCTGCTTT GTTTGAGTTTGGGATTGGTACAGGTGAATTCGTGCAATTCGAATTCGCCCCCACTTGTATGTATATATATTATTAAAGTTAGGGTTATATATGAAGGTTT TTATGAAACTACCCTTATATATGTGTTTGGGTTGAGGAAACCCGAAACTCGACTGGGGCGAGATGTTGTTCATTTTTTAAACCTCGCAGGGTTGGGGTTG GGGAAGGTAAAATGTGAACCCAATCGGTTGTCATTCATAATCCTCCCAAATCTCACTAGGTGGAAGTCTCGTGCAGTATGCTATTCTTTTATGTTATCTA TCAATCGGAGAAAATTCATGATTTGTTTAGAGAAATTTTGTGTTTAATGTATATGATGTTTGTTGATTTCAAATTTGTGATAGTTGTTAAGAAGATATTA TTTAGAATGTTAAATGTGATTGAGATTGATTATTGTTGGAGTTAGAAGGAAATGATTTTTCTTACTCATTGCTTAGGGGATGTATTTTGAGTTTTTAAGT ATTCCCGTATTTAAGATAATCTCGGCCTGCTGCATATCACGTCTTCAAGTAGAAGGACCTATCTAGCACCTTTACACACCAAAGCTAGAGTTGGTCATAA TGCCGAGGCACCCAGATGGTGAGATAAAGTACTGACCTACAGGGTTCTAAAGAGGCCATAAGGTCCTTTTGTCATAGTGGACCTACATAAGTAAAACCGA ATATTGATGTAAGTTTGAAATAAAGGTTAATTGGAGAGATTAAAAAAACAAAATTCATAGAGTTACCCAATTTAATCCTAGTACTAGTAGCATTATTGAA GTCATTGCTAATGTTCCTAAATTTTTAACTGAAGCTATATGCAAAATGAGTTGTTTTCACTATCTGGTTGAAAAATAACAGTTTTCTTGCTAGAGTTGTA CACGGTATGTTTTCTTTTTGCCTTAAATGTACCTGTAGTAGAGTTTAATTGTTACGCATTGTTAGTGGAAATGAGTTTTACATTGACATCCAATAATATT ACGATAAATCATTATTTCGCCATTTCTCTATCTTCCTTATTGATATAAAAAGAGTTGCATCACCCTACTCTGCCTAAAGAACATTATAACTCCTGAAGCT TTGAAACCATATCCAAGATCTACCTACAATTTTTTTGGTACTACCAAGGGTAATCTTGCATCAAAGTTCTCTTGCCTAAATTTCGTAGCATTTATTTTTA ACCACATTTACCATAGAACAACCATTCAGAACATTGAGACAAGCCTTGTAGCTTGCTTATCATGTCCTGAAAACGCTGAAAGAAGCAACCTTGTTACACA ACATTAACACCAAGCCAATCATAAAACTTGCACCAAATGTATGGTGCAATAACGCTTTCCCTAAACAAGTGGGTTGACACGACTCATCAAGAAGCGTGCA CAGCGTACGACCAATGACATAAATTAATCTTAGTTGGAATCCTATCTAAGACTACCTGCTAGACAAATGCTTCAACTTTAAAACGAACATTGGATTTCCA AGTTTTTTTTGAAGAAACTACTATTTCCAGCAACCATAACACGAGGCGTAGTTCGGTATTTACATTGGAATCAAGAGTATGATGCTTTAGCTGAATACAC CCCCTGCTTCCGATTTCCAGGACCAGACATCATCCCTATTCTTAACAAGCTTATGACCACCTACTAGATTCAAAAGCTCCACCTGAAGCGACCAAATCCA AACGCCACCAACCCAATGACCACAATTACTAATAACATTTTTTGTTGTGAAGACACTGCAAATAGTGTATACCATTTTAACTCCCTTTTTTTATTATCTA TATGATCTTTCTGTATCATGATTGCATTCTTGCTTGTACTTATGTGGATTCCAAACATTCCTGATCTATACGTGAACGAGTCGAATTATTTAATCATCAG TTTATCAGTCGATTTATCTCTCTAGGATTGCGAAAGATGTCCAGGTGGAAATATTCTCGTTATTGCTTCGCCCCCCACTAATCGATCTGAATAAATTAAA AAAGACATGCATTAGGCTATACCTTCTTCAGTTCTTTGATATGTTTTGTTTTGAAGCTTCACATATAATGCTACCTTTTGGAGACAGTTTTTTTTATGCT GACAAATTTCTATATTATTTTTTCTGTATCAGGCACCCAAAGTATATCCATATGATAATCTGCGAGTGGAGCTTGGTGGTGAACCATAGGTACTTGATAT CCATTATTAAAGTCACATTCTATATTATGTTGAAGACAATGATGGGGTGAAATCATCATGTTTGATTTAATTGTTAACTTTCATTTATTTGTGTTCCCAT GTAGTTCAAAATAATGGATTGTGTGAAACCAACTATAAGAATTGAACAGTTGAATGTGACTTTGTTCTTTTAATTTTGGTACATTGTTCTTTCAAGTTTT AATTATTCCCATGCATATTGGGACATTATTGTGCTCAATTTGTATACCCTATGGAATATAGGTGTATTTACATTCTAATTATTTGCACAATCCAAACATC AAAGAAAAATGATTTTGAATCAAATTCCAAATTTGATGAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_173181; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458620
Blastp | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial from Arabidopsis with 82.41% of identity |
---|---|
Blastx | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial from Arabidopsis with 83.18% of identity |
Eggnog | NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 8(ENOG410YKP2) |
Kegg | Link to kegg annotations (AT5G47570) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453397.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |