| Id Trinity | TRINITY_DN49908_c2_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_457775 |
| Sequence | TTAATAATTGGTTTACAAGTGAAGAGCTGAAGTGTCTGTATGCATGTGTTGGCAGAAACATAGGAAAAAGTACATGTCCGTGTCTTGTTGTTGTTGTTCT TCCTCTGGTAGATTCCAATGGGTAGTAGGGAAATTGATGCAAGAGAGGGTGCATTGGTGTGGGTCCGTAGAAGAAACGGTTCATGGTGGCCGGGTCGAAT AATGGGTATGCATGAAGTTTCAGATACTTCCTCTGTTTCTCCAAGATCCGGTACTCCTGTTAAGCTCTTAGGCCATCACCATTCTACAGTGGATTGGTAT AATCTTGAAAAATCAAAGCGGGTTAAAGGTTTTAGGTGTGGAGAATATGATGAGTGGATTGAAAAGGCAAAAGTCTCTGCTGCCAATTTGAGCAAGAAGG CACTGAAATATGCTCGCAGGGAGGATGCTATTCTTCATGCTCTTCAGCTTGAGACTGCTCACCTTGGTAAGGAACCATTGGAGTTCTGTTCCCAAGCATA TAAGTTAGGTGCTGAACATGGTGTTTCGGCTGGAGAATCGACCGCCGCGTCTCGTGATGAGAATGTGGTGGGTGAGTTGAGTGATTCTGAAGATAATTCT AATTCGGCTCCAGAGTTGCCTCAGTCTGGTATATCTTTTGAAGAGCCTAATCAAAGTGGTTATGCTAAGGTGCGTCGATCTACGCAAACAAGGAGAAGAA GGACGCCTAATGATTCAGAAGACGATGGAACGGAAGGAGTCAAGCGAATGAGAGGGCTTGAGGACTTGGGCATTGGTGCAGTTTCAAAGAGAAAGGTTCA GGGTGCTGGTTTACCGAAAATAGTTCAGCAAGATAGCACTTTGCTAAGCATTTCAAGCACGGGGAACTGCCTGCAGAATGGAACTTTGGTTAATGGTGGT AAGGGTTACTCTTCAACGTTGAAAAAAAAGAGATCGCAATTGGCAAATGTTCATGAAATCTTGAGAAGGAAAAATCGTCGCCGTCAATTGACGAAGGTTT TGGAGAGTACGGTGGCCATGGTGTCACTTCCATTAATTTGTGATCAACTTCCTTGTTCAAGAAGTTCTCAAATGTGTGGAGTGACTAATAACAAGGCTCC AAAATTAGATTCTAATGTGTCGAAGAGAAGTGATCCTGCAGCAATTCATAATTCTGATACTACTGTGGCTGCTTGTGAGAATGGAACTTGTCAAATCAGT CACACATTAAAGCACATTGAGGCTTCTGCCATATCAGGGCTACTTGGGAATGATTCTTCGGATAAATTAGTTGATCTGCCATTTGTCAGAGTTTTAGGAG AGGAGAAACATGCTACAGGTATTTGAACACTGGAGTGTCTTCTGCATGTGTTATGTGCAATGTTTATGATTGTTATCGGAATATTGTTTTAGTTCATTAT CACCACATACAACTATACAAGCAATAATGTTTTGGGTGGATATTGTGATCGACATATGTGCTATGTGCAATGATCTTTTTCTTTTGATTGGTATTTTGCT TGCCTATTCTTTTTGAACTGCCTCGTTGGTATTTTATATTTTCTCATGTTTGATCTTAACTGTGTTGATTAGTTCACCTTTATCATGATTATTAATGATT CATGTATGAATCTCAGCACATGGAATCTGGAAAACAGATGGAAAATTAATGTGGATGCTTGAAGAAGACATTGGTTATACATTAACAATTTAATGAGCTA ACTTGAGGCACAGTTTTACTTGTGTTATCTTTAGAAGGGAGTTGGGATACATTGCCCATTAATTTTCCACTCGAGCAAGTTTACTTTATGTCTTCATGTT ACTAACTTGGGAATCCAAACCAAACTTTTCACCAAGTTAAGTTTGCCATCTGCTATATTTGGTTTCATAATTATTTCTTTCTTCTGTCCCGATGCTATGA AATGTATAGTTTAAAGTTGCTTTCTTGATCTGTAGATGTGGAGTTAGTATCTGTTGGTTAATTGAATATGTGAATGTGTTCTGTTCGTGAGGTGTACATA CCAATACTACTTAATAGCACTTACTCTAAATTGTTCTTCTTTCGTCTATAAAACCTCTTCCCACTTTTGAAGCAATAGAAGATAGTTCAGTCATAATTCT TTGGTGCTTCTATTTCAATTGAGCAATGCCACTAGTGCTGATGAAATTCCTTCTTCCAGGCTTCATTCCCGCATGTGCTTCTTGTTCATCAGGAAAGCCT CAAGTTGATGCACTGGACCAGCAATCTTGTGATGTTAGTCATTCTGAAGCTTTGTCATTGGGAAAGGAGGGTCAGAAGACTGGTTGTACGAGTTCAGCTG TTGATCATAATATTATTGGCCATAGATCCGAGAGAGATAGTTCAAAGTGGCAGTCAAAAGGAAAGAGGAATTCAAGACATACAAGTAAAAATAGAAAAGA AAGCTCGAGAAAACATGTTGACACGAATGGTGAATCCAATGCTTATCTAGCAGGTATCGAGAACTCTGATGGATTATGTCAAGGTGTCAGTCAGAAAGTT GATCGGAAACCTGTAGGTTCTACCAATGCTGCATACAATTTTACCTCTCAAGTTAGGTACAACTCACTTGCTGAAGGCCAACTAGATGGATTTCGGGACT TGAGCAAGCATATTAGGGGCAAAATTGAGGTGAAGCATTTCCCTGATGGATCTCTCACACCTCAGAGATCCCTTCCTTATCGCCATTCTCGTTTTATTGT TAACTCCAGACGTCAAACTGTAGATGTTCCTGGAAGAAATCATTGTTCTGATGCTTCATTATATGATGTTAAGCTAGAAGTTAAATCCAGCTACCGACCA CAACGTGTCCCTTTGGTTTCTCTTGTGAGTAAATTAAATGGCAAGGCCTTTATTGGACACCCTCTAACAGTTGAGGTTTTGGAAGACGGTCACTATAATA GTTTGTTGGGTGGCGTTAAATGTGACTTGGGAGATGGTGACACTCATTGCATGATCAAGCCAAACTCGGTAACTGGAAGTATACTGTCCAAGAATTTGTC GCGTTTTTCACGTAGTAAATCTTCGAAGAGGAAGAAATCTGGTCTGTTAAATAAAAAGGTTCGCAGATTGTCCTCACTGACTGGACACGGGCAATCAAAA GAGGTGAGGAAATCAAAAGTAAATAAGCAAAAAGGTCCTGTCATTGCTTGTATTCCCCTTAAAGTGGTATTCAGTCGGATAAATGAAGCAGTAAGTGGTC CGGTGCAGCCGATACACCATGTCCAACCAACATCCGACCCTAGACTTGAGGCTCCAGGTATTGAGAAGAGGTTCCGGTGAATGAGATTGTGCTGGAGAAT TGTTTCGTTGGCAACCGAGATTCTTAGTTTTGCAGACGATTACATACGCTTTATCTATGAGTAATTTGGAAGACATGGAGGCGGAATATTTTGTACAACT TGGAGACATTTTACAAACATTGGTGGTAGTAGTTGAAGCATCCAAGGCTTATCTTGGCTGTGTAAATAATGTAACATTTAGCTGAGTTATAAAGATGATA TAGTATTAGGTACTTGTGACTTGATATGAATATAGTTTCTCAAATAGTTATGACATTTGATTCATAAAAAACTTGTCTTCATATTGTACTAGGATTTTTT TCTCGTGGTCATTAATTCAAAGCTACCTCTGAATTCTATATAGAACATTTTATTTGTAGCCTAAAAAATCTATATTTTGTTGGTATTCATGAAATGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_173193; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_457775
| Blastp | Uncharacterized protein At1g51745 from Arabidopsis with 45.23% of identity |
|---|---|
| Blastx | Uncharacterized protein At1g51745 from Arabidopsis with 45.23% of identity |
| Eggnog | NA(ENOG410YAAQ) |
| Kegg | Link to kegg annotations (AT1G51745) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436479.1) |
| Pfam | PWWP domain (PF00855.16) |
| Rfam | - |
| GO | - |