Ll_transcript_458012

• Id Trinity: TRINITY_DN49909_c1_g4_i10
• Name Transcript: Ll_transcript_458012
• Sequence: ATTTGGTGCTTCCTTTCTTTCCTTGGGAGACTGATGGAAGGGACAAAAGCCACGTTAGTGTTGTAATGACATGTTTGGTGAAGACACATGAAATTTGAAA TCAACCACCAAAACTATCTACTAAAGATTCAATAGAAGAAAATAAGCAACAACATGATTATTCTTCTTACTCTCTAAACCGTTGAATCCATCTCTGAAAT TTCCTCAAACTAATCAACAATGGCGTCGTTGAAGGACTTGACGAGGTTCTTTAATGGCATCTCTTTAGTCGCTAACGAATTCGCAAAACGCTCTCTACCC GCCACAACGAGTGACTTTGAAACCCTAATCAAGAAAACTGTGGTCGCAGCCACCGACCTCTCAGGAATTACGAAAGGAAAGGTTCATCGATTCTCAAACC CTACAACTCGATCCCCTTCTTCTGACACCACTACTCATTCTGATTCCGTTGTTTTCTTCGATAACACTTCTTCTTCTCAATCTGAATCAACAACACCACC ACCACCAACAACAACAACAACAATAAACATTGAAAATGTTGCCGGTGTTTCTTCCGCGGAATCTCCCGTTGCAGTTTCTGATGAGGCGGTGGTGGTGGCG GCGGAGAAAGAGAGTGAGACTCGGAGCTCTGTTGAAACGGTTAATGTTAATGGAAATGAAGGAGGCAAGAGTGATGACGTGGTACCTGCACCTGCACATA TACCTGAGCTGAGGAAAAGAAGGCCCCGGGAGAGGAAAGTTCCTTCAACTCCATTTTCCAGGGCTCTTGGTTTTGCTGGGCTAGGAGCTGGTCTTGCCTG GGGGACACTTCAGGAATCTACCAAGAGGCTTGTCTATGGTACACCTTCCCAAGGCAATCAACCCGTGTTTTCTCCATTCCTATCTGAACAAAATGCAGAA CGTTTAGCTCTTGCACTTTGTAGAATGCGTGGAGCAGCACTCAAAATTGGGCAGATGTTGAGCATACAGGATGAATCTCTTGTTCCTGCTCCGGTACTAT GGCATATTTTTATGCTTGTGGCTTAATTGGTTTTAGTGCACACTTATATATTGGGAATACATGTATTTATGATGTAGCTTGTTGTTGATAGTAACTAGGA TTGTTGACTGGTGCTCTGCAATTTAGCATTGAACTTTCCTTGTTGAAAAATTAAGCACTGAATTTTTAATGCTGAAAATGTATTTATGTTACTGAGGGGA ATTATTTTCCTTCAAGTATTTAAATTAGGAAAAAGTTGCTGTTGAATAAATTTATCAATCTCTCCTGTGCTTAAAGTTTTCACTTGTCAGTTCTTTTTTC CCATAAACTTCATTTTTTGCATATATTAAACCATAGGGTTCAAGGTGTGTGGATGAAATGAAGGTATGTGTTAGGTGTCATATGTGATATAATGATAGAA AGGTGTCACTCAAGCTTAGGGGAAAATTTAACTACACATCTATAAGATCTGCAATGTTGCATGAGACTGGATGTTGGGCGATAAAATGCCAACAAGAGAA AAACTCAATGTAGCAGAGATGAGAATATTGTGTTGGATGAGTGAACACACCATACAAGATAATATGAGGAATGTATGCATTAGAGAGAAAGTTGGTGTAG TTCCAATTGCAGAAAAGTGGTAGGATCTCGACTTAAGTGGTATGGGCATGTCTGGAGGAGACCGATAGAAGTCCTGTTAAGGAAAGTAGAACAAATGGAG AGTAATCCAATTTCTATAGGCAGAGGGAAGCCAATAAAAACCTTAGGCAACACCGTTAGGAAAGATTTAGAAATCAATATTTTGTTAATGAATATGATTT ATGTTTGAACATTATGATGTTGTTTGATCTACGTTGCTGATTTCACGTAGTGGGATTAAGGCTTGGTTGTTGTATTAAACAAGGGCTGCTAAATCATTTT CAGCACTGAATTGATGTCTTAAATAGGCTTGAAGTCTTTGTTTCTTGATAGAGTCATTGTATATAATATACATCAACCTATATTGAATGGCATCAGCTGT CAGATGAGTTCTTATATCAAATGGTCCGGGTTGGACATGGCAAAAATGCAGACTTTAGAAACAAAGTGCAGATTTTATAAACAAATAACTAGAGATTGCT TAGTGGATAAAGATCTTCTTATATGATAGTTTGCCATGATCATGTGTTCCATGATCAGAAGAAGTGCTAGGCATCTTTTGCAGCTTTGCTAATTAGATTG TGAATCTATTATTTTTGAGATATATTATTTGGCTTATGTAGTCTATTGCCATCAGTTCTATGAAGGAATCTATGAATGGCTTCTTTTTATTCATTTTAAA AAATTTCATGTCACTTAAAAAATAAGCTCTCAATACTTTATCTGTAGATCCTGGCTGCACTAGAAATTGTCCGTCAAGGTGCAGATGTGATGCCAAAGAG CCAACTTAATCAAGTTTTAAATGCAGAGTTAGGTCCTGACTGGTCATCAAAATTAATTAGTTTTGATTATGAACCTTTAGCTGCTGCTAGTATTGGCCAG GTTCACCGGGCTGTCATAAAGGATGGCATGCACGTTGCAATGAAAATTCAATACCCTGGTGTTGCAGATAGCATTGAGAGTGACATTGAGAACGTGAAAC TTCTTTTAAACTACACAAATCTAATTCCTGAAGGACTTTATCTTGACAGAGCCATAAAGGTGGCCAAAGAGGAATTATCTCGCGAGTGTGATTACAAGTT GGAATCAGCAAGTCAGAAACGATTCCGAGATCTGCTTGCTGGCATGGAAGGATTTTATGTTCCAATAGTTGTGAATGATATTTCAAGCAAGAGAGTTTTA ACTACAGAACTTGTTTATGGGATTACAATTGACAAAGTGGCGTTACTAGACCAGGAAACACGTAATTATATTGGGAAGAAATTATTGGAACTCACATTGT TGGAGTTATTTGTATTCCGATTTATGCAGACTGATCCCAATTGGGGTAATTTTTTATATGATGAAGCTACAAAGACAATCAATCTTATTGATTTTGGAGC TGCACGGGATTTCCCAAAAAGATTTGTTGATGATTATTTAAGAATGGTTCTAGCATGTGCAAACAGTGATAGTGATGGGGTCATTGAGATGTCTAGGAGA CTTGGATTCCTCACTGGAATGGAATCAGATGTGATGCTTGATGCCCACGTTCAAGCTGGTTTTATTGTGGGTTTGCCATTCTCAAGACCAGGCGGTTTTG ACTTCAAATCAAACAACATTGCTCAAAGCATTTCGCACCTCGGGGCGACAATGCTGAAGCACAGGCTCACTCCGCCACCTGATGAAGCTTACAGTCTGCA CAGAAAGCTTTCTGGTGCTTTTTTGGCATGCATTAAGATTGAGGCTGTTGTTCCTTGTAGAGACCTATTGCTTGAAGTGTACAAGCACCATAAGTTTGGT GAAGAAGAAAATGAGATGCTATCTGGTGACTCTGTATAAGGCTTTTTTTTCTTCTCCTATTAATATTCTTTCCCAATTAGAATAATCTTTGGGCTGCTGG TTTGTGCCGAAGCTCCTTAACAAAAATATTCCAATTTGTTCCACAAATAGTATTTTGGGGACAATTTCCCCTCCCCCCATTTGTAACTTATAGTTACTTA TAGAGTTTTTCTCAGATAGATTCTTTGAAAGGTTATTGATTCTTTAAAATATTGTATTTAGAAGTTTTTTTGCCTTCTTCAACATGAAATATGACTATCC ATTCTTGGTGCTTTTTTTGCTGGCTGGATTAGCTGAAATCATTGTTAATGTTCA
• Tissue: pods
• Gene name: LI_gene_173204;
• Additional information: details;

Expression of Ll_transcript_458012

FPKM

• PAB: 4.3
• PNAB: 3
• PS1: 2
• PS2: 1.2
• PS3: 1.7
• PW1: 2.3
• PW2: 2.5
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458012

• Blastp: Protein ABC transporter 1, mitochondrial from Arabidopsis with 80.24% of identity
• Blastx: Protein ABC transporter 1, mitochondrial from Arabidopsis with 80.46% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT4G01660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441253.1)
• Pfam: ABC1 family (PF03109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;