| Id Trinity | TRINITY_DN49909_c1_g4_i11 |
|---|---|
| Name Transcript | Ll_transcript_458013 |
| Sequence | TCTAGTTTTTACCTAATTTTTTAATCTCTCTACCATTAAATCCATCTCTGAAATTTCCTCAAACTAATCAACAATGGTGTCATTGTAGGGCTTGACGAGG ATCTTGAATGGCCTTTCTTTAGTCGTGAACGAATTTTCAAAACGCTATTTATCCGCTACAATGAGTGACTTGGAAACACTAATCAAGAAAACTGTGGTCC CAACCACCGATCTCTCAGGCATTACAAAAGGAAAGGTTCATCGATTCTCAAACCCTACAACTCGATCCCCTTCTTCTGACACCACTACTCATTCTGATTC CGTTGTTTTCTTCGATAACACTTCTTCTTCTCAATCTGAATCAACAACACCACCACCACCAACAACAACAACAACAATAAACATTGAAAATGTTGCCGGT GTTTCTTCCGCGGAATCTCCCGTTGCAGTTTCTGATGAGGCGGTGGTGGTGGCGGCGGAGAAAGAGAGTGAGACTCGGAGCTCTGTTGAAACGGTTAATG TTAATGGAAATGAAGGAGGCAAGAGTGATGACGTGGTACCTGCACCTGCACATATACCTGAGCTGAGGAAAAGAAGGCCCCGGGAGAGGAAAGTTCCTTC AACTCCATTTTCCAGGGCTCTTGGTTTTGCTGGGCTAGGAGCTGGTCTTGCCTGGGGGACACTTCAGGAATCTACCAAGAGGCTTGTCTATGGTACACCT TCCCAAGGCAATCAACCCGTGTTTTCTCCATTCCTATCTGAACAAAATGCAGAACGTTTAGCTCTTGCACTTTGTAGAATGCGTGGAGCAGCACTCAAAA TTGGGCAGATGTTGAGCATACAGGATGAATCTCTTGTTCCTGCTCCGATCCTGGCTGCACTAGAAATTGTCCGTCAAGGTGCAGATGTGATGCCAAAGAG CCAACTTAATCAAGTTTTAAATGCAGAGTTAGGTCCTGACTGGTCATCAAAATTAATTAGTTTTGATTATGAACCTTTAGCTGCTGCTAGTATTGGCCAG GTTCACCGGGCTGTCATAAAGGATGGCATGCACGTTGCAATGAAAATTCAATACCCTGGTGTTGCAGATAGCATTGAGAGTGACATTGAGAACGTGAAAC TTCTTTTAAACTACACAAATCTAATTCCTGAAGGACTTTATCTTGACAGAGCCATAAAGGTGGCCAAAGAGGAATTATCTCGCGAGTGTGATTACAAGTT GGAATCAGCAAGTCAGAAACGATTCCGAGATCTGCTTGCTGGCATGGAAGGATTTTATGTTCCAATAGTTGTGAATGATATTTCAAGCAAGAGAGTTTTA ACTACAGAACTTGTTTATGGTAATTATAATAAACTTCACAATTCGTGTAATACATTCTTTTATACATCCTTGCTTAAGTGAACATTTCAGGGATCACGGC TTGCATAATATATGTGTATTTTAAAGTTGCTCAAAAGGTATATGTTGTTTGCTGTAGCTGCATTTGAGACCCTGTTTAGATTGTCAACGAGATGTTTTGA GAATATAATGCTGTCACCTTCAATGAGATATTTTTATTAAGAAAAAAGTTTGATGCATAACGCTTCCATTGATAACACCATTTGTCCTGTTCATTACTCA TAAGGCGCTTTTATTTTCAGTACAATTTTTTTATTTTCTATTGGGGAGATTGGCAGAGAAGACTGTGTTAGCAAACGACACTGGGGATTGCTTACTAAAT TTGATGATGAATTATTGACATTATTCAGATTAAATAATTATAATGATATTCTTTTAAACAACTCTATTGTATTCATGTTTTAGTTTATCTTTGAACATGG GGTTATTTTCTCTTGCTACAGGGATTACAATTGACAAAGTGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_173204; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_458013
| Blastp | Protein ABC transporter 1, mitochondrial from Arabidopsis with 58.38% of identity |
|---|---|
| Blastx | Protein ABC transporter 1, mitochondrial from Arabidopsis with 75% of identity |
| Eggnog | Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661) |
| Kegg | Link to kegg annotations (AT4G01660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441253.1) |
| Pfam | ABC1 family (PF03109.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |