Ll_transcript_458003

• Id Trinity: TRINITY_DN49909_c1_g4_i4
• Name Transcript: Ll_transcript_458003
• Sequence: AATCTCTCTACCATTGATTCCATTGAGATCTGGTTCATTTGAGATCTGGGCTTGACGAGGATCTTGAATGGCCTTTCTTTAGTCGTGAACGAATTTTCAA AACGCTATTTATCCGCTACAATGAGTGACTTGGAAACACTAATCAAGAAAACTGTGGTCCCAACCACCGATCTCTCAGGCATTACAAAAGGAAAGGTTCA TCGATTCTCAAACCCTACAACTCGATCCCCTTCTTCTGACACCACTACTCATTCTGATTCCGTTGTTTTCTTCGATAACACTTCTTCTTCTCAATCTGAA TCAACAACACCACCACCACCAACAACAACAACAACAATAAACATTGAAAATGTTGCCGGTGTTTCTTCCGCGGAATCTCCCGTTGCAGTTTCTGATGAGG CGGTGGTGGTGGCGGCGGAGAAAGAGAGTGAGACTCGGAGCTCTGTTGAAACGGTTAATGTTAATGGAAATGAAGGAGGCAAGAGTGATGACGTGGTACC TGCACCTGCACATATACCTGAGCTGAGGAAAAGAAGGCCCCGGGAGAGGAAAGTTCCTTCAACTCCATTTTCCAGGGCTCTTGGTTTTGCTGGGCTAGGA GCTGGTCTTGCCTGGGGGACACTTCAGGAATCTACCAAGAGGCTTGTCTATGGTACACCTTCCCAAGGCAATCAACCCGTGTTTTCTCCATTCCTATCTG AACAAAATGCAGAACGTTTAGCTCTTGCACTTTGTAGAATGCGTGGAGCAGCACTCAAAATTGGGCAGATGTTGAGCATACAGGATGAATCTCTTGTTCC TGCTCCGATCCTGGCTGCACTAGAAATTGTCCGTCAAGGTGCAGATGTGATGCCAAAGAGCCAACTTAATCAAGTTTTAAATGCAGAGTTAGGTCCTGAC TGGTCATCAAAATTAATTAGTTTTGATTATGAACCTTTAGCTGCTGCTAGTATTGGCCAGGTTCACCGGGCTGTCATAAAGGATGGCATGCACGTTGCAA TGAAAATTCAATACCCTGGTGTTGCAGATAGCATTGAGAGTGACATTGAGAACGTGAAACTTCTTTTAAACTACACAAATCTAATTCCTGAAGGACTTTA TCTTGACAGAGCCATAAAGGTGGCCAAAGAGGAATTATCTCGCGAGTGTGATTACAAGTTGGAATCAGCAAGTCAGAAACGATTCCGAGATCTGCTTGCT GGCATGGAAGGATTTTATGTTCCAATAGTTGTGAATGATATTTCAAGCAAGAGAGTTTTAACTACAGAACTTGTTTATGGTAATTATAATAAACTTCACA ATTCGTGTAATACATTCTTTTATACATCCTTGCTTAAGTGAACATTTCAGGGATCACGGCTTGCATAATATATGTGTATTTTAAAGTTGCTCAAAAGGTA TATGTTGTTTGCTGTAGCTGCATTTGAGACCCTGTTTAGATTGTCAACGAGATGTTTTGAGAATATAATGCTGTCACCTTCAATGAGATATTTTTATTAA GAAAAAAGTTTGATGCATAACGCTTCCATTGATAACACCATTTGTCCTGTTCATTACTCATAAGGCGCTTTTATTTTCAGTACAATTTTTTTATTTTCTA TTGGGGAGATTGGCAGAGAAGACTGTGTTAGCAAACGACACTGGGGATTGCTTACTAAATTTGATGATGAATTATTGACATTATTCAGATTAAATAATTA TAATGATATTCTTTTAAACAACTCTATTGTATTCATGTTTTAGTTTATCTTTGAACATGGGGTTATTTTCTCTTGCTACAGGGATTACAATTGACAAAGT GGC
• Tissue: pods
• Gene name: LI_gene_173204;
• Additional information: details;

Expression of Ll_transcript_458003

FPKM

• PAB: 2.1
• PNAB: 0
• PS1: 0
• PS2: 0.7
• PS3: 0
• PW1: 0
• PW2: 0.7
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458003

• Blastp: Protein ABC transporter 1, mitochondrial from Arabidopsis with 58.38% of identity
• Blastx: Protein ABC transporter 1, mitochondrial from Arabidopsis with 75% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT4G01660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441253.1)
• Pfam: ABC1 family (PF03109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;