Ll_transcript_457037

• Id Trinity: TRINITY_DN49910_c0_g2_i1
• Name Transcript: Ll_transcript_457037
• Sequence: ATTATGACTCATGGAAAAGAAAACATGATTTATCAATCACTGTCACAAAATATTCCAAATCTAAAAACCCTTTTCTCATTACACTCTTCTTCCAATTCCT AGCTTCTATTCCACTACTCTCTCCCTTCTTGTTCTGCTATCTGCATCATTTTTTCAACACTGAGTTTCTGAATCCTTGGAATGTTGAACTAACCCAAGCT TTTCCCTTTTTGATGATATTGATATTGTTAATATTTATAGAGATACATAACATAGAAGCTTGAAAATGAGGGTTCCTTTGGGTGCAGTTATAGGAAGGTA CCCATCAAGTGATGGAACTACCCAAATGGGTGGAATCATAAGGCATAACAGAAAATGCAGAGACATTGCTGTTTTAGTCATTTTTATAGGTTTTTGGGTT GCAATGATTGTCAATTCCAGCTTTGGTTTCAATCAAGGAAACCCATCAAGGCTAACTTATGGGCTGGACTACAAAGGAAATGTGTGTGGGGACAAGCATG CGGGGCTTCGTGAATTGGAGCTCAAGTACTGGCTTAATCCTAATCAGATTCATCAAAGTGGATTGAAGGATAGCCAGTTCAAACTGGCCAATGCACGTAG TATATGCTTGTTGGACTGCCCTATACCTTCTGAAGATTCTCTTAATTGGGTGTGTGATTATCCTGATGGGGATATTCGTCTTTCAACGGATGATTGGATA GATAGGAACTACGATTATTTTGAGTTCCTTACACCTGAAATGAGAAACTCCACTCTTCAACTTCAGGGACCTTGTTATCCTGTCATATTCCCTAGTGTAA ATGTTTACTGGAGTTGCCAACTCATTGCTCGAGCATCAAATGTGTCTTTAAAGCATTGGCAGCAGTTAGGTGGAGTTAGCATCGAAAACATTGTTATCAA TAATTCCATTCACAAGTATATCAATTCTCGGTCAGCTGTCTTAAAGAGATACATGGCTGACATAGGAAAGGCTTGGCCTGTGCTAATTGTTTGTGGCGGA ATTTTACCTCTTTTTCTGTCTGTGATTTGGCTGCTAATGATTCGACATTTTGTTTCTGCAATGCCTTGGATAACAGTGGTTTTATTTAATATTCTAATAG TATCAGTCACAATGTTCTGCTACCTGAAAGTTGGATGGATAGGAAATGATGCTATTTCTCCCATTATCGGTGAGCATGACCCTTACATTCATGTATTTGG GAGGGAGCTGACTCATCTGCGTGCTGTCACTGTACTAATGACCTTTATCATGGTTGTTTCCGTTCTTACATCAATTGCTATTGTTCGACGCATCCTTATG GCAACATCTGTCCTTAAGGTTGCAGCAAAAGTGATCGGAGAAGTTCAAGCACTTATTATTTTCCCAATCATACCATATGCTGTCCTTGCGGTGTTCTACA TGTTTTGGATTTCTGCTGCTCTGCATTTGTTCAGCTCTGGCCGGGTTGTTCAGAATAACTGCAACTCTAACTGTTGTGCATATGATCTCCTGGAAAAAAA GGTAAACTGTGACCGGTGTTGTGGATATAGCATTCGTTACACACCGCATATTGGAGTTTCCATCCTTTTTCACCTACTTGGATGTTATTGGGCTACACAA TTTTTCATAGCATGCTCGTCAACTGTGATTGCTGGATCTGTTGCGTCTTATTATTGGGCCCGCGGTGAAACATCTCCAGAAATTCCTTTTCGTTCGGTCA TTTCCTCCATGAAGAGGCTTATGCGTTACAGCCTTGGTTCTGTGGCTCTTGGTTCCCTGACTGTTTCATTTGTAGAGTCAATCCGCTTTCTGCTTGAATC TATTCGGCGCAAACTAAAAGTCTCTACTCACGTACCTGACAGCTGGATTGGGAAGGCAGCATACCAATCTTCTCATTGTTTTCAAAGGTGTATTGAGTGG ATCATCAAATCAGTGAATCGTAATGCTTACATCATGATTGCCATAACGGGTAAAAGTTTCTTTAGAGCATCTGCAATTGCAACAGAATTGATCATGAATA ACATCCTACGGATTGGGCGTGTCAATGTGATTGGGGATGTTATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCAAGTGCTGTTATTGCATTCCTCAT GTTGGACTCACACAAATATAAATCTGCACATAACAAGATTTCATCTCCGCTCTTGCCTGTCATGATTTGCTGGACACTTGGGTATATTGTTGCAACTCTT TTCTTTGGAGTTGTAGAGATGTCAATTGACACAATCATTCTCTCATTCTGCCAAGATTCTGAAGAGCATGGAACAGCACAGTATGCTCCACCCCTTCTCA TTGAAACTCTCAGTGACAACAATGACATGCAGAGACTTACACAAGGACCCCAATGAAAAAATTTCATCTTTTGCTTTCTTGGTGATGATTTCCAACACAA CTTAAAGGTTTAAAATTTTGTTTTGTTGCTTATTTAGTAATTTTCCCAGGTCTGTATATAATGTTGGACAAAGGTTCTCAATGGTTAGTAGGTTGTTAAG TAGCTATCTTTTTCTTACTAATGGGTTATGCTAGGATATCATGTTATGGGCACAAACAAAAACAAATTCAATACATGTTCTTATATAATTATATTTATTT CTCAAAACTTCATATTGTAATGAGTTATAAGAGCTTTGGAGTTGTATTGTCAATTCTAGAGATTTTACCTTTCTATATCTAGCAATACAATATATTTAAT TTGTATGTAAAAA
• Tissue: pods
• Gene name: LI_gene_173213;
• Additional information: details;

Expression of Ll_transcript_457037

FPKM

• PAB: 1
• PNAB: 8.8
• PS1: 7.3
• PS2: 3.4
• PS3: 5.2
• PW1: 4.8
• PW2: 4
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_457037

• Blastp: Choline transporter protein 1 from Arabidopsis with 76.57% of identity
• Blastx: Choline transporter protein 1 from Arabidopsis with 76.43% of identity
• Eggnog: Solute carrier family 44 member(ENOG410XS0P)
• Kegg: Link to kegg annotations (AT3G15380)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443957.1)
• Pfam: Plasma-membrane choline transporter (PF04515.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;