| Id Trinity | TRINITY_DN49910_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_457041 |
| Sequence | TATTGGGCTACACAATTTTTCATAGCATGCTCGTCAACTGTGATTGCTGGATCTGTTGCGTCTTATTATTGGGCCCGCGGTGAAACATCTGTAAGTTTTT AATATCCTGTCCATAGATGAAATGAATTGTGCAATTTAGAGGATTCAGTGAGGGTTTATGCAGACATTACTACCAAAGTTTTATAACATTGAATGATACT TGTAGAAATTGACTATCATTTTTCCCCGCCTAGTGGGAACAGGCGTTGTTGTTATTGTTGTTGTATGACTAACATTTTATTCATTATCAAAATATTATGG TGTGAGATAGCTAGATTGTTAAACTCCTTTTGTCAAGACAATTTTGCTGCTTCATAATATTTAAGAACCACTTCAGATGAAACTGGCAAACTGCGGGTCC TTTTATATATGGCTAAGGAGTTTGATTATCAATTAGTTTAACACGATTTGATAGTTGCAAAATTCTCTTTTATATATGTCATTTGAGATGATTTACCTTT CTGAGTGCAGCCAGAAATTCCTTTTCGTTCGGTCATTTCCTCCATGAAGAGGCTTATGCGTTACAGCCTTGGTTCTGTGGCTCTTGGTTCCCTGACTGTT TCATTTGTAGAGTCAATCCGCTTTCTGCTTGAATCTATTCGGCGCAAACTAAAAGTCTCTACTCACGTACCTGACAGCTGGATTGGGAAGGCAGCATACC AATCTTCTCATTGTTTTCAAAGGTGTATTGAGTGGATCATCAAATCAGTGAATCGTAATGCTTACATCATGATTGCCATAACGGGTAAAAGTTTCTTTAG AGCATCTGCAATTGCAACAGAATTGATCATGAATAACATCCTACGGATTGGGCGTGTCAATGTGATTGGGGATGTTATTTTGTTCCTTGGAAAACTGTGT GTCAGCCTCTCAAGTGCTGTTATTGCATTCCTCATGTTGGACTCACACAAATATAAATCTGCACATAACAAGATTTCATCTCCGCTCTTGCCTGTCATGA TTTGCTGGACACTTGGGTATATTGTTGCAACTCTTTTCTTTGGAGTTGTAGAGATGTCAATTGACACAATCATTCTCTCATTCTGCCAAGATTCTGAAGA GCATGGAACAGCACAGTATGCTCCACCCCTTCTCATTGAAACTCTCAGTGACAACAATGACATGCAGAGACTTACACAAGGACCCCAATGAAAAAATTTC ATCTTTTGCTTTCTTGGTGATGATTTCCAACACAACTTAAAGGTTTAAAATTTTGTTTTGTTGCTTATTTAGTAATTTTCCCAGGTCTGTATATAATGTT GGACAAAGGTTCTCAATGGTTAGTAGGTTGTTAAGTAGCTATCTTTTTCTTACTAATGGGTTATGCTAGGATATCATGTTATGGGCACAAACAAAAACAA ATTCAATACATGTTCTTATATAATTATATTTATTTCTCAAAACTTCATATTGTAATGAGTTATAAGAGCTTTGGAGTTGTATTGTCAATTCTAGAGATTT TACCTTTCTATATCTAGCAATACAATATATTTAATTTGTATGTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_173213; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_457041
| Blastp | Choline transporter protein 1 from Arabidopsis with 72.56% of identity |
|---|---|
| Blastx | Choline transporter protein 1 from Arabidopsis with 72.12% of identity |
| Eggnog | Solute carrier family 44 member(ENOG410XS0P) |
| Kegg | Link to kegg annotations (AT3G15380) |
| CantataDB | Link to cantataDB annotations (CNT0002034) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443957.1) |
| Pfam | Plasma-membrane choline transporter (PF04515.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |