Id Trinity | TRINITY_DN49914_c3_g1_i4 |
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Name Transcript | Ll_transcript_457492 |
Sequence | AACTGCTGTTTCTGCTGCAAAGGTAAGGCAATTTTATCTCATTTTTATCTGGTTTTAATATCATCAACTAATGATAAGTATCTTTTTATTGTCTGAAGGC TGTTAATTATTACAATGCTGGAACTGTAGAGTTTATAGTTGACACAGTCTCTGGTCAGTTTTACTTTATGGAAATGAACACCCGTCTTCAGGTTGAGCAT CCTGTCACAGAGATGATTGTTGGTCAAGATCTTGTTGAATGGCAAATCCATGTTGCAAATGGAGAAGCTCTTCCATTGAGTCAATCACAAGTACCCATAT CAGGTCATGCGTTTGAAGCTCGGATCTATGCTGAAAATGTTCCAAAGGGATTTCTTCCAGCAACTGGAGTACTTCATCATTATCGAGTCCCCGTCTCATC CACTGTTCGGGTGGAGACTGGAGTTAAAGAAGGGGACACTGTTAGCATGCACTATGATCCAATGATAGCTAAGCTTGTGGTGCATGGAGAAAATCGCGAT GCAGCCTTGATCAAACTGAAGGACTGCTTGTCAAAGTTTCAGGTTGCGGGGCTACCAACCAATATTAACTTCCTTCAGAATCTTGCTAATCACAGGGCAT TTGGAAATGGCAATGTGGAGACTCATTTCATTGATAACCACAAAGAAGACCTCTTTGTTGACACTACGAATTCAGTGTCCGCAAAAGAAGCATATTCTGC TGCTAGACTTAGTGCATCCTTTGTGGCTGCATGTCTCATTGAGAAAGAGCATGTCATATTGGCAAGAAATACCCCTG BLAST |
Tissue | pods |
Gene name | LI_gene_173238; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_457492
Blastp | Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial from Soja with 88.67% of identity |
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Blastx | Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial from Soja with 88.84% of identity |
Eggnog | carboxylase(COG4770) |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0002402) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441883.1) |
Pfam | Carbamoyl-phosphate synthase L chain, ATP binding domain (PF02786.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |