Ll_transcript_458305

• Id Trinity: TRINITY_DN49917_c2_g1_i1
• Name Transcript: Ll_transcript_458305
• Sequence: AACCTGTAAATATATCACTTTGACTCTGTATATGTCTAATCTCTATATGGCTTCAACAACACTCTCATTTTCTTCTTCTTCCTCCATCTTTCCCTTTCCC AAACCCAACCCAATAGCCCAAGATCCAAACTTTGGTGTTACCCACTATTCAACTTCAGCTCCACCATCAAAATCTGCTTCTACTTCTTCTAATGAAAGCG AATTTCTTAGTTTCTCACAAACAACTTTTTCTGGGACTAATAGGAAGACAAACGTTAAAAAGAAGAAAAAGAAGAACAACAACAACAAAAACAATGCTAT GGTTGTGGCCCACACTCTCCCTCAAGTCTTTACCTATTGCATCCATAACAAGCGTTGGCTTAAAGCCCTTCAGTTATTTGACATGCTTAGAGAGCAACCC TATTACGAACCCAAGGAGAAGACTTACATGAAACTCATTGTGTTGCTTGGGAAATCTGGTCAACCCCATCATGCTCACCAGCTTTTTAATGCTATGAAAG AAGATGGTTGTGAAAGTACTCAACTTTACACAGCCTTACTTGCAGCATATTGTCGGAATAGCTTGATCGATGAGGCATTTTCGACTCTTGATGAGATGAA GCACCTCCCTCGCTGCCAACCCGATGTTGTCACTTACAATACCTTGATAAAAGCTTGTGTGGATGCTTTGAAAATTGAACAGGTTGAGTTGCTATACGAA GAAATGGCTGAAAGATCGATTGTGCCGGAAACTGCCACTCATAACATTGTTTTGAGTGGTTATGGTAAGGCTGGGTGGTTTGACAAGATGGAGAAAATGC TGTCCAGTATGACAGAGAGCACTAAATGCAAGCCTGATATTCTGACAATGCACACAGTCATCAGTGTCTTTGGTAATAAGGGTCGACTTGATCTGATGGA GAAATGGTACGATAAATTCTGTGATTTCGGGATACAACCAGAAACCCGAACTTTTAATATTTTGATTGGAGCTTATGGGAAGAAAGGAATGTATGAAAAC ATGTCATCTGTTATGGAGTCTATGCGCAAATTACACTGTCCATGGACTACCTCGACGTATAACAATTTGATTGAGGTATTTGCAGCCGTCGGTGATGCTA GAAGCATGGAGTATACATTTGATCAGATGTGTGGTGATGGTATGAAAGTAGATACTAAGACTTTCTGCTGCCTTATTAATGGTTATGCCAATGCCGGTAT CTTCCATAAAGTAAATAGCGTTGTTCAATTGGCGGGGAGGTTTCAGATACCCGAGAATACTTCGTTTTATAACGCAGTCATATCTGCATGTGCAAAGGCA GAGGATTTAATCGAAATGGAAAGAATTTTCAAGCGAATGAAAGAAAAACGATGTCAACCAGATGAAACAACATACTCTATCTTGGTTGAGGCATATCGAA AGGAAGGTATGGATGATAAGATATACTATTTGGAACAGGAAATTCGGATTACGATAACCGGTGAAAAGGAATTTTGACTATGCCTGAAACCCATGGTTGA TTTGTGGTTTAAATCAGAAGTTAGAGTGCTAATTCATTTACACATCTTCCATCATTCTTAGCAGCTGCAGTTGTTTTGTAATTTCATGTGTATGTAATGA TCAGTGAGGTAATTGAGGTTCTTTTGTCATGTTGACGACAACCTAAGTTACCATATTCTCTCAACATCGATGCGAAACTCATACCGGATTCATCGCACCA TGTACCAGATTCACTATAAAGAATGTCGTGTAATATAATCACAAGAAACGACAAGTCATGTACCCGAACTCGTCCCATGTATCCTCGTGTACCTCATTTC TGTTAACTGTGATGACAAATCCTGTCAAACTTATTGTAAGTTCTATTGTAAATTTTATTAGCATCCATTCTGCATTTTGATGCTGATAGCTTGTATGATC CTTCAAAGATGGAATGGAATGTTGAACAATATTAAACTCTTAGATGTTGTAATTTTGTGTTTGAGTATTATTAGGTTCAGTTTCTATTTATAGCATTAGG TTAGTGGATTTTATTATTTTTGCACCTAATCCCTAAAATTTCAATATAGTACCACATCACTATTCCAC
• Tissue: pods
• Gene name: LI_gene_173257;
• Additional information: details;

Expression of Ll_transcript_458305

FPKM

• PAB: 1
• PNAB: 3
• PS1: 4
• PS2: 1.4
• PS3: 3.5
• PW1: 3.6
• PW2: 3.3
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458305

• Blastp: Pentatricopeptide repeat-containing protein At3g06430, chloroplastic from Arabidopsis with 62.47% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g06430, chloroplastic from Arabidopsis with 67.81% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G06430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414806.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;