Ll_transcript_456427

• Id Trinity: TRINITY_DN49921_c1_g1_i3
• Name Transcript: Ll_transcript_456427
• Sequence: AAAGAAATGAAAAAAAGGCGGGTCTCGGGGGAAACAGAGAGGAGAGTTTGAGGAGAGAATGGAAGACGAAGATGAACAAGTGGTGTCTCTGTCCTCTTCT TCTTCCGATTCAGGCGATGACGAATACTCCGTCGAAGATGAACAAGCGGTGTCTCTGTCTTCTTCTTCTTCCGATGATAAAGAACGCAAATCTCAGAATG TGGATGCTCTGCTCAGCGGAAAGTTGATAGTGAAGAGGCAATCGTTGGTACCGCAAGTTCTATCAGTTCCACTTTGTAGAAAACCCTTCAAACCTCCATG CTCCTCTTCCAATTACAACCAACACCTTAGTCGGAGGCTTTCCCTCCGTAAAAGGTTTGTTCCTTGGAGACAACAACAACCTTCTGTCTTGCTTGAAACC ACTAACATACACTTCAATAATACAGACCTTGTACAAGAACAAGAACAAGAGGATAAACTTTGTTTGCCCCCTGGGATTGATCCTCTAATACTGTGGGACC CTCCTCAAGGTCATGACCACCAACCAATTTCTGTTCACCCTTTGCTTGTTCGTTTCCTTCGTCCTCATCAAAGGGAAGGAGTTCAGTTTATGTTTGATTG TGTCTCTGGCCTACGTAGTTCTGCCAATATCCATGGCTGCATTTTGGCTGATGATATGGGTTTGGGAAAGACATTGCAATCCATCACGTTACTTTATACT CTACTTTCTCAAGGCTTTGATGGCAATCCAATGGTTAGAAAGGCCATCATTGTCACCCCTACCAGCCTTGTCAGTAATTGGGAAGCTGAAATCAATAAGT GGCTTGGATCTAGAATTCATCTTCTTGCTCTTTGTGAAAGCACAAGAGAAGATGTCATCTCTGGGATTCAAAATTTTACAAGTGCCCGCACCACGTTACA GGTGCTGATTGTTTCATATGAGACATTCAGAATGCACTCTTTAATGTTCAGCTCCACTGACTCTTGTGACCTTCTTATATGTGACGAGGCTCACAGACTG AAAAATGATCAGACAATAACCAACCGGGCATTAGCTGCTCTACCATGCAAACGTAGAATTTTGTTGTCAGGAACTCCTTTGCAGAATGACTTAGAAGAAT TCTTTGCAATGGTTAACTTCACCAATCCTGGAATATTGGGTGATATTGCACATTTTCGACGGTACTATGAGGCACCAATTATTTGCGGAAGAGAACCTAC TGCCACTGCAGAAGAGATGAAGCTAGGTGCTGAACGCTCCACAGAATTAAGTATCAAAGTTAATCAGTTCATATTAAGAAGGACTAATGCATTATTATCG AATCACTTACCACCAAAGATAATTGAAGTTGTTTGCTGCAAGTTGTCTCCATTACAGTCAGAGCTATATAAACATTTTATACAATCAAAAAACGTTAAAC GTGCAATTACTGAAGAAGTGAAGCAATCCAGGATTTTGGGCTACATAACAGCTCTCAAGAAGTTGTGCAATCATCCAAAGCTTATATATGATACCATCCG A
• Tissue: pods
• Gene name: LI_gene_173295;
• Additional information: details;

Expression of Ll_transcript_456427

FPKM

• PAB: 0.7
• PNAB: 3.7
• PS1: 3.1
• PS2: 2.4
• PS3: 3.8
• PW1: 2.5
• PW2: 2.4
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456427

• Blastp: Protein CHROMATIN REMODELING 25 from Arabidopsis with 66.8% of identity
• Blastx: Protein CHROMATIN REMODELING 25 from Arabidopsis with 71.05% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT3G19210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444509.1)
• Pfam: Type III restriction enzyme, res subunit (PF04851.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;