| Id Trinity | TRINITY_DN49923_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_456238 |
| Sequence | AGTGTGTAAGCAGAGCAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGGAAGTAAACTAGT AGTAACGTCTTCTTACACACAAACCCTAATTCAATTCAATTGAAGAAAAGAGGAAGTTTATTCTTCATTCATTCATTCATTCTTCATCCATCTTCATCAT GTGGACCAATGTTTTCAAAATTCCTGGTCTTCATCAGATATCATGGTTCCAATTCATGCCGCACGAACCTGACCTAAATCCTCCTCTACCTCTACCTGAC AACAAAAGTGCAAAAGTGGATGCTGCAATGTTACAAGTGCTTTCATCACATCTACAATTGCAGAAGGAAGGATTTCTCACTGCATGGACCAATTCCTTTG TCGGACCGTGGGACCCTTCTCAGGGTTTGCATAATCCTGATGAAAAGATCAAGCTCTGGCTTTTTATCCCTGGACGTCATTCATCGCTTCTTGACAATGC TCAACCTTTAGTATCCACACTAAGAGTCGTTGCCTCTGGCCTCTGGCTGGCTCCTGGGGATTCAGAAGAGGTTGCATCTGCTCTCTCTCAGGCTTTAAGG AATTGTATAGAAAGATCACTTATTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAACTTCAAAGTGAAGAACTGTTCAGGAGGG GGCATCCGGCACTTGAGTTTGCCTTTGCTGCAAATGAGGAGGCAATCTTTATACATGTCATACTGTCCTCAAAGCATATCCGGATGCTTACCACAGGTGA TCTGGAAAAAGTATTAAAACATTCTACAGAGGCAACACATGGACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGCCTCACTGGTTGTTCTCCA AGTGATCTCGTCAAGCAAAGCTATTTCAGTTCTGCCAAGGTCAAGGCATCGAATGGAATTGTAGGTCTCCCATATCATGTTCCCCAAGGTGTTGGTTGCA AGCTGAGGGGGCAGAATTGTCATGTTGAAGTACGTCTTGGCTTCCCTAGACCTGGAACTGACAAGGCGTCACAGCAAAACAAAAATAATGTCAGGAATTT AACTAAGTTCAATGCTGCTGAATCTCTTGTTGTGGGACAAAGTGATCACAAGGGATCACCTAATCATTTGTCAGATTATGAGAAAACGTTTCTCTATCCA GCTGAGGCAGTGCTTGTGCCAGTTTTACAAACATCATTAGCAAGATCTTCTTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCTTCCCTCCCTGGTT CCTTGTCCTTTATTCACTGTGCTGGTAATTTGGATAATTCTGAAGATCCATGGACTGAAATAAATGGAACCCGCACTCAAAATAGTTATGATAGTAGTAG CAATAGCAATAGTAGCAGCATCAGTAGCTTAAGCGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTAGAGGCTGATGCTGATTCT TTAACATGTAGACAATCGGTGCTATCTTCCGGTGATCAGTTGCAAAGTGATGGCCTCAAATTGGGCTCTAAGCGGTCTCGAACAGGGGTGACAGAATCAT TAAGCACAGCTACAAATGTTATCGTGCAAGATGCATACATGTCTGATGTGGGTTCCATGGAAGTTAACAATTCAGCCATTACTGTAGGAAATGAGCCTAT TGGGTCGTACTGGAACTGGGATGATGATGATAGAGACCCAGTAATGGATATTGGAGCTCTTCTGTCTGAGTTTGGTGATTTTGGTGATTTTTTTGTAAAT GATGTTTTGCCTTTTGGAGAGCCCCCAGGAACTGCGGAATCTCAGGCACTTGTGTTTTCTGCACCGGATTGTGGAGATGTTAACAGCAGTCCAGTTGGAG TGATGGATGTTTCAGATCAAACGCTTTTGCCTGTTGGATTTACTTCTTTTGAGAGCTTTAATCCACCTCCTTCAATAGCCATGGAGGAATGTCTCAGCAA AAATCAAGATAACTTGAATAACTCCATGTCATCGGTTCCAGTCAATCAAACTCAAATTTCATGTACACGGGAAGTTGAACATATAATGAAAGCTGAAGCA ATGATGATATTTACTGCTGAATTTGGAGCCGTTGAGACCCCTACCAGTGATTTGTCCACATTATTCACGAGCCCATATTTTCCAAAATCTCGAAAAGCAG AGAGTTCAAATTCAAGTTCAAACAATTACTTGTATGGTGCAGCACCACCCTCTACTCCCTACATTGATGGATCAGAGGGGAAGAATGGTATGGTGGCCAC TACAAAAACAATTTGTGGAAAACATGATGCAAGTACGAGTCTCCACCCCAGAAATTACTATAATTATGTGGAGAGTAGGAAGGACATAAATGACAGAAAA CCAGCTAATTTAAATGATAACGTCAACGGTAAATCTGAGGGGATGGTGCAACCTCTGTTCTCAAATATTGGTTCCAATGCTGTCACCAAGTCTGTTCTAA GGAAGATGAGTGAAGGCACACATGAGACGGAGCATTTCCTTCTCTCTGCAAAAACTTTGTTAGCGACTGATGTCACATGTGTTATGTTGCAAGCTTCCAT GTGCAGGCTACGACACATTCTCTTATCTTCTAGTAACCTCATGCCTGTTGGTTTGAGCAGGTCAACTGGGGCTACATTTTTTAATCAGCTTCCTGGTGAC CCAAGTACAACAACAGACAACATATCCAATAAGTATGAGGTTAAGAAGAAAGAAAATATACCAGTTCGAATTGCAGGTGATATTGATGGAGGAATGCTTG ATGGGCACCAGAACGCGCCTGTTGGTGTCTGGCGTACTGTAGGAGTTTCTAAAGTTGTAAAGTCTTCAAACTCGCCAAACATGGAAGTTGGTCCTTCCTT TTCTCATACTTCATTCAATGAAGATGGTATGCTTTCTTACAGTCAAAGAAAACCACTTCAGGAGCTTCTTGATGGGATTCCTTTGCTTGTCCAACAAGCT ATTTCCTTTGTTGATCTGGCCTTGGATGCGGATTGGGGTGATGGTCCTTATGGTTTGCTTGCATTGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGC CTTCGATGGTCCATGCTGGTTGTGGGGGAACTCTTGCTTCATCTCATTCGTTGGACATTGCTGGTGTCGAGTTACTGGACCCACTTTCTGCTGATGTCCA TGCATCTACTGTGATCAGTTTGCTGCAGTCTGATGTAAAAACAGCTTTAAAGTCTGCATTTTCCAATTTGGAAGGGCCATTATCTGTGACTGATTGGTGC AAAGGACGCAATCAGTTGGTTGATGCTGGCAGCATAGTTGATGGTGTTTCTGCTGAGTCCAGCATTAGTGAATGTAGGGATTCCTCAGAACCAATGAGTC CATCCCAGTCATCTGTCGCTGGATCATCCATTATTAAGGGATCTAGCATGATGGATAGTGCTAAGGTGGATGAGATTTCCCAACGGAGAATTGGCCAAGA TATATGCAGTTCAGAGTCAGAGCGGCAGCCATGTTCCCGGCTAAAACCTACCCTCACTGCTCTTCCATTTCCTTCTATACTCATGGGGTATCAGGATGAT TGGCTCAAGACATCAGCAAACTGTCTACAGTACTGGGAAAAGGCTCCTCTAGAACCCTATGCTCTACAGAAACCTATCACATATCATGTTGTATGTCCTG ACATCGATCCTCTTACCTCTGCCGCTGCTGATTTTTTTCAACAACTAGGAACTGTGTATGAGACATGCAAACTAGGTACTCATTCTCCACAAGTGTTGGG GAATCAGATGGAGATAGAGTCTGGGAAGTTGTCATCTAGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCCATGCGTCTCTT GTTGGTTCAATAAGTGATTATTTTTTATCTTTATCTAATGGTTGGGATCTGACTAGTTATCTGAAGTCTCTTTCAAAGGCGCTTAGAGCTTTAAAACTTA GTTCTTGCCTTTCCACAAACCCCACTGAAGGAAGCAACAGTTCATGCATGGTAATCTATGTGGTGTGCCCTTTTCCTGATCCTACTGCAATTTTGCAAAC TGTAATTGAATCTTCCGTTGCCATTGGATCGGTTATCCAACAGTCAGATAGAGAGAAGAGATCTACCTTGCATAGTCAGGTTTTGAAGGCATTAAGTGGC TTGGCAACTGTTGATGAAGCTTCAGCATCTAATATCCTTGTCCTTTCTGGGTTTAGCATTCCAAAATTGGTCTTGCAGATAGTCACAGTTGATGCCATTT TCAGAGTCACAGGTCCATCAGTTAGTGAGCTTGCCATTTTGAAAGAGACTGCCTTCACTGTTTACAGCAAGGCTCGTCGAATTTCACGGGGAATCTCTAG TGACTTTCCTCTATCAGCATTTTCAGGTAGGTCTCATTCTGTTTTGACACAAATGCCTTCTCCCATATCGGGGATGTGGAAAGACAGCGTTGGTCCTCGA ATAGTAGGTCATTCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGTCTGGTGGGTGGGATAATTCTTGGCAACCAACGAGGAGTGCGGGATTGA ACTGTGATCCAAGTAGATCTGGGGATACTTTTTTTCACGATGAAATTAGGTACATGTTTGAACCCCTTTTTATTCTAGCAGAACCAGGTTCTCTAGATCA TGGTACTTCTGTTATTGGTAGCCCCACTTCAGAATCTTCAAAAACATTGGGAGATGACAGTAGTGGTAGCTATATGCAGCAGAGTACAAGTACAGCTGGA AGCATGGATTCTGCTTCAAGCATTGATGGCTTAGGGTCTGATCAAAAGACTCCTCCGAGCCTACATTGTTGCTATGGATGGACCGAGGACTGGCGTTGGC TTGTATGCATCTGGACAGATTCAAGGGGAGAACTGCTTGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACCAAGGGTCTGCAATG CCTATTTGCTCAAGTTCTTCAGCAAGGTTGTCTAATACTTCAATCTTGTGATACCAGTCTTGCAAAACCTCGAGATTTTGTGATAGCACGCATTGGTGGT TTCTACGAGCTTGAATACCTTGAGTGGCAAAAAGCCATCTATTCATTTGGTGGATCTGAGATGAAGAGATGGCCCCTGCAACTCCGGAAATATATGTCGG ATGGGGTGTCCATAACTAGTAATGGTTCTTCTTTACAACAACCAGAGATGAGTTTGATCCCAGAAAGAACTCTCCCTTCTTCACCTAGTCCTTTGTACAG CCCTCATACCAAAGCCACTGGTTTTATGAAAGGCGGCAGTTTAGGGCAATCTGCTGTGAGAAAGCAGCATATGGGTGGACATTCTATGGTTGACAACAAT TCAAGGGGTTTACTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCTATGGATCATACATTACAGCTTGTTCTCCCAGCTTCTGATTCATCTGGTT ACACAGAAGGTTTTACTCCAGTGAAGTCTCTTGGTTCTACGTCTTGCGCGTATGTTGTAATTCCTTCTCCTAGTATGAGGTTCCTTCCTCCAACAGCTCT TCAACTCCCGACATGCCTCACTGCAGAATCTCCACCTCTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCACTGTCCACAGGATTTGTGGTTTCA AAAGCAGTACCTTCCATGAGGAAGGACCACAGAAGCAACCTGAAAGAAGAATGGCCTTCAGTACTTTCAGTGAGCCTCATTGATTACTATGGAGTTGCTA ATATCCGAGGAATTAACAATAAGCAGCAAGGTGGTGGTAGAAGTTTAAGCTGGGAAACTAAAGATTTTGAAACAGAGACCCACTTGGTTCTGGAGACCCT TGCTGCAGAGCTTCATGCTTTGTCATGGATGACTGTGAGCCCCACATACATAGAGCGGCGAACGTCACTTCCTTTCCACTGTGACATGGTTCTAAGACTA AGAAGACTTCTTCACTTTGCTGATAAAGAGCTATCTAAGAAGTCAGAGAAATCTTGACTACACCATATGCTATGATTAATACACTGCAATACTGCATCCT ATCCTATCCATACATATTAATTATATTGATCCTTTGTAAAATATTTGTAAAGCCTCTTCCTTGTGTGTTCCAGGAAGAAAGATTTAGCAGTTGTAGGGTA TGACTGGAAATAGTTGAGAATGCATGTACATGAGTTGAGTTTTCTAGAGCAGCTGATTGTTAGCATTATTGATTTATTGATGAAAGCTGTTGATGGCACA TAGGACTTTGACTATGGTTTTCTTGTAGAAAAGTGCATGAGAAAACCTTCAAGCAAGTCCATCTAGTAAGTAGAATGCAGCTAGGTGTGAGGGGATAATA AAATCTAATTATACTTGATTAACACTTTGTTGACACCTTATCTTTATTATAATAAAAATTTATGCTACTCGCACTTTTGTCGGGTGATGAGGAAATGATA AAACTTTTGAATCCTAAACCATGTTTCTTCACCTCAAATCTTAAGCAAAATGTTTTTAGCATTCTTCTAACACTAACACTCTGTTTGGTTTAAAGAGGAC AATAGAAAGAAAGAAAACGGAAGGAAAGAAAAAAGAAGGAATGAAAATAAGTAGAAAATGAGATGAAAAGTTAGTTGTTTGGTCTAAAAGAAAAAAAAAT GAAAGAAAATTATAACTTTTCTCTCCTCTTGTTTGGTCGTGTAGAAAGTGGAAGGAAAGAAAAAATATGTGTCAAATTCCATAAATACCCTAAATAAAAG GTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_173314; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456238
| Blastp | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.34% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.25% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT1G55325) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438262.1) |
| Pfam | Mediator complex subunit 13 C-terminal (PF06333.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |