Ll_transcript_456251

• Id Trinity: TRINITY_DN49923_c0_g2_i5
• Name Transcript: Ll_transcript_456251
• Sequence: AGTGTGTAAGCAGAGCAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGGAAGTAAACTAGTAGTAACGTCTTC TTACACACAAACCCTAATTCAATTCAATTGAAGAAAAGAGGAAGTTTATTCTTCATTCATTCATTCATTCTTCATCCATCTTCATCATGTGGACCAATGT TTTCAAAATTCCTGGTCTTCATCAGATATCATGGTTCCAATTCATGCCGCACGAACCTGACCTAAATCCTCCTCTACCTCTACCTGACAACAAAAGTGCA AAAGTGGATGCTGCAATGTTACAAGTGCTTTCATCACATCTACAATTGCAGAAGGAAGGATTTCTCACTGCATGGACCAATTCCTTTGTCGGACCGTGGG ACCCTTCTCAGGGTTTGCATAATCCTGATGAAAAGATCAAGCTCTGGCTTTTTATCCCTGGACGTCATTCATCGCTTCTTGACAATGCTCAACCTTTAGT ATCCACACTAAGAGTCGTTGCCTCTGGCCTCTGGCTGGCTCCTGGGGATTCAGAAGAGGTTGCATCTGCTCTCTCTCAGGCTTTAAGGAATTGTATAGAA AGATCACTTATTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAACTTCAAAGTGAAGAACTGTTCAGGAGGGGGCATCCGGCAC TTGAGTTTGCCTTTGCTGCAAATGAGGAGGCAATCTTTATACATGTCATACTGTCCTCAAAGCATATCCGGATGCTTACCACAGGTGATCTGGAAAAAGT ATTAAAACATTCTACAGAGGCAACACATGGACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGCCTCACTGGTTGTTCTCCAAGTGATCTCGTC AAGCAAAGCTATTTCAGTTCTGCCAAGGTCAAGGCATCGAATGGAATTGTAGGTCTCCCATATCATGTTCCCCAAGGTGTTGGTTGCAAGCTGAGGGGGC AGAATTGTCATGTTGAAGTACGTCTTGGCTTCCCTAGACCTGGAACTGACAAGGCGTCACAGCAAAACAAAAATAATGTCAGGAATTTAACTAAGTTCAA TGCTGCTGAATCTCTTGTTGTGGGACAAAGTGATCACAAGGGATCACCTAATCATTTGTCAGATTATGAGAAAACGTTTCTCTATCCAGCTGAGGCAGTG CTTGTGCCAGTTTTACAAACATCATTAGCAAGATCTTCTTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCTTCCCTCCCTGGTTCCTTGTCCTTTA TTCACTGTGCTGGTAATTTGGATAATTCTGAAGATCCATGGACTGAAATAAATGGAACCCGCACTCAAAATAGTTATGATAGTAGTAGCAATAGCAATAG TAGCAGCATCAGTAGCTTAAGCGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTAGAGGCTGATGCTGATTCTTTAACATGTAGA CAATCGGTGCTATCTTCCGGTGATCAGTTGCAAAGTGATGGCCTCAAATTGGGCTCTAAGCGGTCTCGAACAGGGGTGACAGAATCATTAAGCACAGCTA CAAATGTTATCGTGCAAGATGCATACATGTCTGATGTGGGTTCCATGGAAGTTAACAATTCAGCCATTACTGTAGGAAATGAGCCTATTGGGTCGTACTG GAACTGGGATGATGATGATAGAGACCCAGTAATGGATATTGGAGCTCTTCTGTCTGAGTTTGGTGATTTTGGTGATTTTTTTGTAAATGATGTTTTGCCT TTTGGAGAGCCCCCAGGAACTGCGGAATCTCAGGCACTTGTGTTTTCTGCACCGGATTGTGGAGATGTTAACAGCAGTCCAGTTGGAGTGATGGATGTTT CAGATCAAACGCTTTTGCCTGTTGGATTTACTTCTTTTGAGAGCTTTAATCCACCTCCTTCAATAGCCATGGAGGAATGTCTCAGCAAAAATCAAGATAA CTTGAATAACTCCATGTCATCGGTTCCAGTCAATCAAACTCAAATTTCATGTACACGGGAAGTTGAACATATAATGAAAGCTGAAGCAATGATGATATTT ACTGCTGAATTTGGAGCCGTTGAGACCCCTACCAGTGATTTGTCCACATTATTCACGAGCCCATATTTTCCAAAATCTCGAAAAGCAGAGAGTTCAAATT CAAGTTCAAACAATTACTTGTATGGTGCAGCACCACCCTCTACTCCCTACATTGATGGATCAGAGGGGAAGAATGGTATGGTGGCCACTACAAAAACAAT TTGTGGAAAACATGATGCAAGTACGAGTCTCCACCCCAGAAATTACTATAATTATGTGGAGAGTAGGAAGGACATAAATGACAGAAAACCAGCTAATTTA AATGATAACGTCAACGGTAAATCTGAGGGGATGGTGCAACCTCTGTTCTCAAATATTGGTTCCAATGCTGTCACCAAGTCTGTTCTAAGGAAGATGAGTG AAGGCACACATGAGACGGAGCATTTCCTTCTCTCTGCAAAAACTTTGTTAGCGACTGATGTCACATGTGTTATGTTGCAAGCTTCCATGTGCAGGCTACG ACACATTCTCTTATCTTCTAGTAACCTCATGCCTGTTGGTTTGAGCAGGTCAACTGGGGCTACATTTTTTAATCAGCTTCCTGGTGACCCAAGTACAACA ACAGACAACATATCCAATAAGTATGAGGTTAAGAAGAAAGAAAATATACCAGTTCGAATTGCAGGTGATATTGATGGAGGAATGCTTGATGGGCACCAGA ACGCGCCTGTTGGTGTCTGGCGTACTGTAGGAGTTTCTAAAGTTGTAAAGTCTTCAAACTCGCCAAACATGGAAGTTGGTCCTTCCTTTTCTCATACTTC ATTCAATGAAGATGGTATGCTTTCTTACAGTCAAAGAAAACCACTTCAGGAGCTTCTTGATGGGATTCCTTTGCTTGTCCAACAAGCTATTTCCTTTGTT GATCTGGCCTTGGATGCGGATTGGGGTGATGGTCCTTATGGTTTGCTTGCATTGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGCCTTCGATGGTCC ATGCTGGTTGTGGGGGAACTCTTGCTTCATCTCATTCGTTGGACATTGCTGGTGTCGAGTTACTGGACCCACTTTCTGCTGATGTCCATGCATCTACTGT GATCAGTTTGCTGCAGTCTGATGTAAAAACAGCTTTAAAGTCTGCATTTTCCAATTTGGAAGGGCCATTATCTGTGACTGATTGGTGCAAAGGACGCAAT CAGTTGGTTGATGCTGGCAGCATAGTTGATGGTGTTTCTGCTGAGTCCAGCATTAGTGAATGTAGGGATTCCTCAGAACCAATGAGTCCATCCCAGTCAT CTGTCGCTGGATCATCCATTATTAAGGGATCTAGCATGATGGATAGTGCTAAGGTGGATGAGATTTCCCAACGGAGAATTGGCCAAGATATATGCAGTTC AGAGTCAGAGCGGCAGCCATGTTCCCGGCTAAAACCTACCCTCACTGCTCTTCCATTTCCTTCTATACTCATGGGGTATCAGGATGATTGGCTCAAGACA TCAGCAAACTGTCTACAGTACTGGGAAAAGGCTCCTCTAGAACCCTATGCTCTACAGAAACCTATCACATATCATGTTGTATGTCCTGACATCGATCCTC TTACCTCTGCCGCTGCTGATTTTTTTCAACAACTAGGAACTGTGTATGAGACATGCAAACTAGGTACTCATTCTCCACAAGTGTTGGGGAATCAGATGGA GATAGAGTCTGGGAAGTTGTCATCTAGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCCATGCGTCTCTTGTTGGTTCAATA AGTGATTATTTTTTATCTTTATCTAATGGTTGGGATCTGACTAGTTATCTGAAGTCTCTTTCAAAGGCGCTTAGAGCTTTAAAACTTAGTTCTTGCCTTT CCACAAACCCCACTGAAGGAAGCAACAGTTCATGCATGGTAATCTATGTGGTGTGCCCTTTTCCTGATCCTACTGCAATTTTGCAAACTGTAATTGAATC TTCCGTTGCCATTGGATCGGTTATCCAACAGTCAGATAGAGAGAAGAGATCTACCTTGCATAGTCAGGTTTTGAAGGCATTAAGTGGCTTGGCAACTGTT GATGAAGCTTCAGCATCTAATATCCTTGTCCTTTCTGGGTTTAGCATTCCAAAATTGGTCTTGCAGATAGTCACAGTTGATGCCATTTTCAGAGTCACAG GTCCATCAGTTAGTGAGCTTGCCATTTTGAAAGAGACTGCCTTCACTGTTTACAGCAAGGCTCGTCGAATTTCACGGGGAATCTCTAGTGACTTTCCTCT ATCAGCATTTTCAGGTAGGTCTCATTCTGTTTTGACACAAATGCCTTCTCCCATATCGGGGATGTGGAAAGACAGCGTTGGTCCTCGAATAGTAGGTCAT TCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGTCTGGTGGGTGGGATAATTCTTGGCAACCAACGAGGAGTGCGGGATTGAACTGTGATCCAA GTAGATCTGGGGATACTTTTTTTCACGATGAAATTAGGTACATGTTTGAACCCCTTTTTATTCTAGCAGAACCAGGTTCTCTAGATCATGGTACTTCTGT TATTGGTAGCCCCACTTCAGAATCTTCAAAAACATTGGGAGATGACAGTAGTGGTAGCTATATGCAGCAGAGTACAAGTACAGCTGGAAGCATGGATTCT GCTTCAAGCATTGATGGCTTAGGGTCTGATCAAAAGACTCCTCCGAGCCTACATTGTTGCTATGGATGGACCGAGGACTGGCGTTGGCTTGTATGCATCT GGACAGATTCAAGGGGAGAACTGCTTGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACCAAGGGTCTGCAATGCCTATTTGCTCA AGTTCTTCAGCAAGGTTGTCTAATACTTCAATCTTGTGATACCAGTCTTGCAAAACCTCGAGATTTTGTGATAGCACGCATTGGTGGTTTCTACGAGCTT GAATACCTTGAGTGGCAAAAAGCCATCTATTCATTTGGTGGATCTGAGATGAAGAGATGGCCCCTGCAACTCCGGAAATATATGTCGGATGGGGTGTCCA TAACTAGTAATGGTTCTTCTTTACAACAACCAGAGATGAGTTTGATCCCAGAAAGAACTCTCCCTTCTTCACCTAGTCCTTTGTACAGCCCTCATACCAA AGCCACTGGTTTTATGAAAGGCGGCAGTTTAGGGCAATCTGCTGTGAGAAAGCAGCATATGGGTGGACATTCTATGGTTGACAACAATTCAAGGGGTTTA CTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCTATGGATCATACATTACAGCTTGTTCTCCCAGCTTCTGATTCATCTGGTTACACAGAAGGTT TTACTCCAGTGAAGTCTCTTGGTTCTACGTCTTGCGCGTATGTTGTAATTCCTTCTCCTAGTATGAGGTTCCTTCCTCCAACAGCTCTTCAACTCCCGAC ATGCCTCACTGCAGAATCTCCACCTCTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCACTGTCCACAGGATTTGTGGTTTCAAAAGCAGTACCT TCCATGAGGAAGGACCACAGAAGCAACCTGAAAGAAGAATGGCCTTCAGTACTTTCAGTGAGCCTCATTGATTACTATGGAGTTGCTAATATCCGAGGAA TTAACAATAAGCAGCAAGGTGGTGGTAGAAGTTTAAGCTGGGAAACTAAAGATTTTGAAACAGAGACCCACTTGGTTCTGGAGACCCTTGCTGCAGAGCT TCATGCTTTGTCATGGATGACTGTGAGCCCCACATACATAGAGCGGCGAACGTCACTTCCTTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTT CACTTTGCTGATAAAGAGCTATCTAAGAAGTCAGAGAAATCTTGACTACACCATATGCTATGATTAATACACTGCAATACTGCATCCTATCCTATCCATA CATATTAATTATATTGATCCTTTGTAAAATATTTGTAAAGCCTCTTCCTTGTGTGTTCCAGGAAGAAAGATTTAGCAGTTGTAGGGTATGACTGGAAATA GTTGAGAATGCATGTACATGAGTTGAGTTTTCTAGAGCAGCTGATTGTTAGCATTATTGATTTATTGATGAAAGCTGTTGATGGCACATAGGACTTTGAC TATGGTTTTCTTGTAGAAAAGTGCATGAGAAAACCTTCAAGCAAGTCCATCTAGTAAGTAGAATGCAGCTAGGTGTGAGGGGATAATAAAATCTAATTAT ACTTGATTAACACTTTGTTGACACCTTATCTTTATTATAATAAAAATTTATGCTACTCGCACTTTTGTCGGGTGATGAGGAAATGATAAAACTTTTGAAT CCTAAACCATGTTTCTTCACCTCAAATCTTAAGCAAAATGTTTTTAGCATTCTTCTAACACTAACACTCTGTTTGGTTTAAAGAGGACAATAGAAAGAAA GAAAACGGAAGGAAAGAAAAAAGAAGGAATGAAAATAAGTAGAAAATGAGATGAAAAGTTAGTTGTTTGGTCTAAAAGAAAAAAAAATGAAAGAAAATTA TAACTTTTCTCTCCTCTTGTTTGGTCGTGTAGAAAGTGGAAGGAAAGAAAAAATATGTGTCAAATTCCATAAATACCCTAAATAAAAGGTCT
• Tissue: pods
• Gene name: LI_gene_173314;
• Additional information: details;

Expression of Ll_transcript_456251

FPKM

• PAB: 0.7
• PNAB: 3.6
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 3.7
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456251

• Blastp: Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.34% of identity
• Blastx: Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.25% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT1G55325)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438262.1)
• Pfam: Mediator complex subunit 13 C-terminal (PF06333.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;