| Id Trinity | TRINITY_DN49923_c0_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_456260 |
| Sequence | AGTGTGTAAGCAGAGCAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGAGAGGAAGTAAACTAGTAGTAAC GTCTTCTTACACACAAACCCTAATTCAATTCAATTGAAGAAAAGAGGAAGTTTATTCTTCATTCATTCATTCATTCTTCATCCATCTTCATCATGTGGAC CAATGTTTTCAAAATTCCTGGTCTTCATCAGATATCATGGTTCCAATTCATGCCGCACGAACCTGACCTAAATCCTCCTCTACCTCTACCTGACAACAAA AGTGCAAAAGTGGATGCTGCAATGTTACAAGTGCTTTCATCACATCTACAATTGCAGAAGGAAGGATTTCTCACTGCATGGACCAATTCCTTTGTCGGAC CGTGGGACCCTTCTCAGGGTTTGCATAATCCTGATGAAAAGATCAAGCTCTGGCTTTTTATCCCTGGACGTCATTCATCGCTTCTTGACAATGCTCAACC TTTAGTATCCACACTAAGAGTCGTTGCCTCTGGCCTCTGGCTGGCTCCTGGGGATTCAGAAGAGGTTGCATCTGCTCTCTCTCAGGCTTTAAGGAATTGT ATAGAAAGATCACTTATTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAACTTCAAAGTGAAGAACTGTTCAGGAGGGGGCATC CGGCACTTGAGTTTGCCTTTGCTGCAAATGAGGAGGCAATCTTTATACATGTCATACTGTCCTCAAAGCATATCCGGATGCTTACCACAGGTGATCTGGA AAAAGTATTAAAACATTCTACAGAGGCAACACATGGACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGCCTCACTGGTTGTTCTCCAAGTGAT CTCGTCAAGCAAAGCTATTTCAGTTCTGCCAAGGTCAAGGCATCGAATGGAATTGTAGGTCTCCCATATCATGTTCCCCAAGGTGTTGGTTGCAAGCTGA GGGGGCAGAATTGTCATGTTGAAGTACGTCTTGGCTTCCCTAGACCTGGAACTGACAAGGCGTCACAGCAAAACAAAAATAATGTCAGGAATTTAACTAA GTTCAATGCTGCTGAATCTCTTGTTGTGGGACAAAGTGATCACAAGGGATCACCTAATCATTTGTCAGATTATGAGAAAACGTTTCTCTATCCAGCTGAG GCAGTGCTTGTGCCAGTTTTACAAACATCATTAGCAAGATCTTCTTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCTTCCCTCCCTGGTTCCTTGT CCTTTATTCACTGTGCTGGTAATTTGGATAATTCTGAAGATCCATGGACTGAAATAAATGGAACCCGCACTCAAAATAGTTATGATAGTAGTAGCAATAG CAATAGTAGCAGCATCAGTAGCTTAAGCGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTAGAGGCTGATGCTGATTCTTTAACA TGTAGACAATCGGTGCTATCTTCCGGTGATCAGTTGCAAAGTGATGGCCTCAAATTGGGCTCTAAGCGGTCTCGAACAGGGGTGACAGAATCATTAAGCA CAGCTACAAATGTTATCGTGCAAGATGCATACATGTCTGATGTGGGTTCCATGGAAGTTAACAATTCAGCCATTACTGTAGGAAATGAGCCTATTGGGTC GTACTGGAACTGGGATGATGATGATAGAGACCCAGTAATGGATATTGGAGCTCTTCTGTCTGAGTTTGGTGATTTTGGTGATTTTTTTGTAAATGATGTT TTGCCTTTTGGAGAGCCCCCAGGAACTGCGGAATCTCAGGCACTTGTGTTTTCTGCACCGGATTGTGGAGATGTTAACAGCAGTCCAGTTGGAGTGATGG ATGTTTCAGATCAAACGCTTTTGCCTGTTGGATTTACTTCTTTTGAGAGCTTTAATCCACCTCCTTCAATAGCCATGGAGGAATGTCTCAGCAAAAATCA AGATAACTTGAATAACTCCATGTCATCGGTTCCAGTCAATCAAACTCAAATTTCATGTACACGGGAAGTTGAACATATAATGAAAGCTGAAGCAATGATG ATATTTACTGCTGAATTTGGAGCCGTTGAGACCCCTACCAGTGATTTGTCCACATTATTCACGAGCCCATATTTTCCAAAATCTCGAAAAGCAGAGAGTT CAAATTCAAGTTCAAACAATTACTTGTATGGTGCAGCACCACCCTCTACTCCCTACATTGATGGATCAGAGGGGAAGAATGGTATGGTGGCCACTACAAA AACAATTTGTGGAAAACATGATGCAAGTACGAGTCTCCACCCCAGAAATTACTATAATTATGTGGAGAGTAGGAAGGACATAAATGACAGAAAACCAGCT AATTTAAATGATAACGTCAACGGTAAATCTGAGGGGATGGTGCAACCTCTGTTCTCAAATATTGGTTCCAATGCTGTCACCAAGTCTGTTCTAAGGAAGA TGAGTGAAGGCACACATGAGACGGAGCATTTCCTTCTCTCTGCAAAAACTTTGTTAGCGACTGATGTCACATGTGTTATGTTGCAAGCTTCCATGTGCAG GCTACGACACATTCTCTTATCTTCTAGTAACCTCATGCCTGTTGGTTTGAGCAGGTCAACTGGGGCTACATTTTTTAATCAGCTTCCTGGTGACCCAAGT ACAACAACAGACAACATATCCAATAAGTATGAGGTTAAGAAGAAAGAAAATATACCAGTTCGAATTGCAGGTGATATTGATGGAGGAATGCTTGATGGGC ACCAGAACGCGCCTGTTGGTGTCTGGCGTACTGTAGGAGTTTCTAAAGTTGTAAAGTCTTCAAACTCGCCAAACATGGAAGTTGGTCCTTCCTTTTCTCA TACTTCATTCAATGAAGATGGTATGCTTTCTTACAGTCAAAGAAAACCACTTCAGGAGCTTCTTGATGGGATTCCTTTGCTTGTCCAACAAGCTATTTCC TTTGTTGATCTGGCCTTGGATGCGGATTGGGGTGATGGTCCTTATGGTTTGCTTGCATTGCAAGAACAGTGGAGGCGTGGATTTTGTTGTGGGCCTTCGA TGGTCCATGCTGGTTGTGGGGGAACTCTTGCTTCATCTCATTCGTTGGACATTGCTGGTGTCGAGTTACTGGACCCACTTTCTGCTGATGTCCATGCATC TACTGTGATCAGTTTGCTGCAGTCTGATGTAAAAACAGCTTTAAAGTCTGCATTTTCCAATTTGGAAGGGCCATTATCTGTGACTGATTGGTGCAAAGGA CGCAATCAGTTGGTTGATGCTGGCAGCATAGTTGATGGTGTTTCTGCTGAGTCCAGCATTAGTGAATGTAGGGATTCCTCAGAACCAATGAGTCCATCCC AGTCATCTGTCGCTGGATCATCCATTATTAAGGGATCTAGCATGATGGATAGTGCTAAGGTGGATGAGATTTCCCAACGGAGAATTGGCCAAGATATATG CAGTTCAGAGTCAGAGCGGCAGCCATGTTCCCGGCTAAAACCTACCCTCACTGCTCTTCCATTTCCTTCTATACTCATGGGGTATCAGGATGATTGGCTC AAGACATCAGCAAACTGTCTACAGTACTGGGAAAAGGCTCCTCTAGAACCCTATGCTCTACAGAAACCTATCACATATCATGTTGTATGTCCTGACATCG ATCCTCTTACCTCTGCCGCTGCTGATTTTTTTCAACAACTAGGAACTGTGTATGAGACATGCAAACTAGGTACTCATTCTCCACAAGTGTTGGGGAATCA GATGGAGATAGAGTCTGGGAAGTTGTCATCTAGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCCATGCGTCTCTTGTTGGT TCAATAAGTGATTATTTTTTATCTTTATCTAATGGTTGGGATCTGACTAGTTATCTGAAGTCTCTTTCAAAGGCGCTTAGAGCTTTAAAACTTAGTTCTT GCCTTTCCACAAACCCCACTGAAGGAAGCAACAGTTCATGCATGGTAATCTATGTGGTGTGCCCTTTTCCTGATCCTACTGCAATTTTGCAAACTGTAAT TGAATCTTCCGTTGCCATTGGATCGGTTATCCAACAGTCAGATAGAGAGAAGAGATCTACCTTGCATAGTCAGGTTTTGAAGGCATTAAGTGGCTTGGCA ACTGTTGATGAAGCTTCAGCATCTAATATCCTTGTCCTTTCTGGGTTTAGCATTCCAAAATTGGTCTTGCAGATAGTCACAGTTGATGCCATTTTCAGAG TCACAGGTCCATCAGTTAGTGAGCTTGCCATTTTGAAAGAGACTGCCTTCACTGTTTACAGCAAGGCTCGTCGAATTTCACGGGGAATCTCTAGTGACTT TCCTCTATCAGCATTTTCAGGTAGGTCTCATTCTGTTTTGACACAAATGCCTTCTCCCATATCGGGGATGTGGAAAGACAGCGTTGGTCCTCGAATAGTA GGTCATTCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGTCTGGTGGGTGGGATAATTCTTGGCAACCAACGAGGAGTGCGGGATTGAACTGTG ATCCAAGTAGATCTGGGGATACTTTTTTTCACGATGAAATTAGGTACATGTTTGAACCCCTTTTTATTCTAGCAGAACCAGGTTCTCTAGATCATGGTAC TTCTGTTATTGGTAGCCCCACTTCAGAATCTTCAAAAACATTGGGAGATGACAGTAGTGGTAGCTATATGCAGCAGAGTACAAGTACAGCTGGAAGCATG GATTCTGCTTCAAGCATTGATGGCTTAGGGTCTGATCAAAAGACTCCTCCGAGCCTACATTGTTGCTATGGATGGACCGAGGACTGGCGTTGGCTTGTAT GCATCTGGACAGATTCAAGGGGAGAACTGCTTGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACCAAGGGTCTGCAATGCCTATT TGCTCAAGTTCTTCAGCAAGGTTGTCTAATACTTCAATCTTGTGATACCAGTCTTGCAAAACCTCGAGATTTTGTGATAGCACGCATTGGTGGTTTCTAC GAGCTTGAATACCTTGAGTGGCAAAAAGCCATCTATTCATTTGGTGGATCTGAGATGAAGAGATGGCCCCTGCAACTCCGGAAATATATGTCGGATGGGG TGTCCATAACTAGTAATGGTTCTTCTTTACAACAACCAGAGATGAGTTTGATCCCAGAAAGAACTCTCCCTTCTTCACCTAGTCCTTTGTACAGCCCTCA TACCAAAGCCACTGGTTTTATGAAAGGCGGCAGTTTAGGGCAATCTGCTGTGAGAAAGCAGCATATGGGTGGACATTCTATGGTTGACAACAATTCAAGG GGTTTACTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCTATGGATCATACATTACAGCTTGTTCTCCCAGCTTCTGATTCATCTGGTTACACAG AAGGTTTTACTCCAGTGAAGTCTCTTGGTTCTACGTCTTGCGCGTATGTTGTAATTCCTTCTCCTAGTATGAGGTTCCTTCCTCCAACAGCTCTTCAACT CCCGACATGCCTCACTGCAGAATCTCCACCTCTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCACTGTCCACAGGATTTGTGGTTTCAAAAGCA GTACCTTCCATGAGGAAGGACCACAGAAGCAACCTGAAAGAAGAATGGCCTTCAGTACTTTCAGTGAGCCTCATTGATTACTATGGAGTTGCTAATATCC GAGGAATTAACAATAAGCAGCAAGGTGGTGGTAGAAGTTTAAGCTGGGAAACTAAAGATTTTGAAACAGAGACCCACTTGGTTCTGGAGACCCTTGCTGC AGAGCTTCATGCTTTGTCATGGATGACTGTGAGCCCCACATACATAGAGCGGCGAACGTCACTTCCTTTCCACTGTGACATGGTTCTAAGACTAAGAAGA CTTCTTCACTTTGCTGATAAAGAGCTATCTAAGAAGTCAGAGAAATCTTGACTACACCATATGCTATGATTAATACACTGCAATACTGCATCCTATCCTA TCCATACATATTAATTATATTGATCCTTTGTAAAATATTTGTAAAGCCTCTTCCTTGTGTGTTCCAGGAAGAAAGATTTAGCAGTTGTAGGGTATGACTG GAAATAGTTGAGAATGCATGTACATGAGTTGAGTTTTCTAGAGCAGCTGATTGTTAGCATTATTGATTTATTGATGAAAGCTGTTGATGGCACATAGGAC TTTGACTATGGTTTTCTTGTAGAAAAGTGCATGAGAAAACCTTCAAGCAAGTCCATCTAGTAAGTAGAATGCAGCTAGGTGTGAGGGGATAATAAAATCT AATTATACTTGATTAACACTTTGTTGACACCTTATCTTTATTATAATAAAAATTTATGCTACTCGCACTTTTGTCGGGTGATGAGGAAATGATAAAACTT TTGAATCCTAAACCATGTTTCTTCACCTCAAATCTTAAGCAAAATGTTTTTAGCATTCTTCTAACACTAACACTCTGTTTGGTTTAAAGAGGACAATAGA AAGAAAGAAAACGGAAGGAAAGAAAAAAGAAGGAATGAAAATAAGTAGAAAATGAGATGAAAAGTTAGTTGTTTGGTCTAAAAGAAAAAAAAATGAAAGA AAATTATAACTTTTCTCTCCTCTTGTTTGGTCGTGTAGAAAGTGGAAGGAAAGAAAAAATATGTGTCAAATTCCATAAATACCCTAAATAAAAGGTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_173314; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456260
| Blastp | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.34% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 13 from Arabidopsis with 56.25% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT1G55325) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438262.1) |
| Pfam | Mediator complex subunit 13 C-terminal (PF06333.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |