Ll_transcript_457579

• Id Trinity: TRINITY_DN49927_c2_g3_i3
• Name Transcript: Ll_transcript_457579
• Sequence: CTTTTCTCTCTATTTCTCTAACCTGTGTTTTTTTCTTCATAAAAATTCAATCTTTATGTATTTTTCCTCTTACCCACTTCTATAATTCACTTCCGATTGT CGTTTAAACCCTTCTGATTGCCGTTTACTGTGATAATTTAAAGTGGGCTTTTTCCCTTTTCCCAATTAGAATGTGTTTATGGGTTGATTGTTTCTTCTTT CATGGAAAATTCAGTTATATGCTTATGTTGTTTTTTGCTTTTTAATGTTCTGGATGAGAATAGTGATCATGATTTTTCAATTGGAATGAAAATATGTTTG TGTTGGTTGATGCATGTGCATAGCTTTACTTTGAAGGAAAGAATAAAAAAATTCACCCAATTTGATGGAACACTGTGAAAAGGAAATTGTCGGTGTGTGG CAAAAAAAGTTACAAGTAAAAACCAAAAAACTTTGTCATGTTCATTTTAAAATTTTGTACTAGTTATTTTATGTTTTTTGTGTCTATTTTATATTATAAT CATGATTTTCCTTTCTGTAATATATGCTTGTTGATTTGGAGCTTGAGAATTAGCTGCATTGCTCAGTGGTACATTAAATTTTAAGCTCAGTGCAATTAGG GCGCTTGAATTATTCTCTGTTATCATAATTTAGTTCTTAAAGAAGAACTAACTTGATATGAGTTTTGTAAATTTTAAGATTTAACTATATATTGTGGGAC CCATCCGCGATCGAGGAGCCTAAAGATTTAGGGCAATGGTTCCGTGAGTCTTTTCTGCTTATAAGTTCTTCCACTCATCCTCTTATACCTATCATATATA AATAAGTAAACTCTAAGTGAGGGAGTCTTGGTGCAACGGTTAATGTTGTTACCATTTGACAAGGAGGTCAAGGGATTGAGTCTTGGAATAAGTGTATTGC AAATTCGAGGTTAGACTGCCTACTATAGACTCTCACTGTGGGTCAGCCGTTCCCATATCGGGAGTTTTGTATCACCAGTTTGCCCTTTTTTAACTACATT GTAACTGGAAGCATAATTTCGTAGATTAAGTTGCCTATTTTTCTATTTTAATTGTTGAAATTGCATGAATGATAGCTTCTACAAAAGTGCAAAATTTTCA CTGTATTTTTATGCAATTGTGGTAAATTTGGCAGGCGAGCAAAGGAAACGGTGTCTGCGTATCCATATTTCCAGGGCATCTGAACTTAAGAGAGAGGCTG GTTCGTGGAGGCTGTGGGATTTCTGCAAGCTTATGGTGCTGTTGGAGGTTTCTTTTCTCAAATCTTGCATGTAGAACTAACTCATTTTATTTAACTAGTT GAAGACTGGGGAAAAGAATTCAAGTTAAATAAAGATATCGGGAAGCTGCAATGGGTTCTGTTTGTTGTTGTTTCAGTTTTGACGATTTTGAAGATTATGT AAATCCAAATAGTTCTGTGTATAGGAACTGTGTGTGTCTCAGTTGCTTTATACAGAACCTCTTGACTGTGTATGCAGCAATATTCCGTAGAGGGGAAGTG CATTCAGTTCCTTCATCTCTTCAAGGTGCAGCATCCATGTCTTCTACAGCATCACTTGACAATTCTCTATCTGACATGTACCGTTCTCCTCCAAGGCCCT TACCTTATGATGCAGAACCCAGGTATTTCCGCTCAAGGCGTGAGAAGGGTTCAAGTCATTTGAATGAGGAATCCGAACCTCTGAGAAGTGATGTAGATAT CGATCCAGAATCATTAAGTTCAGGAGACAAATGGAATGAATGCGCCGGAGAGGATGGATCAAAGGAATATCGTTCTAAGTCCTCACTGAAACTTTCATCA GCAAAATATTCAACTGGAGTCGGGGTTGTCTATGCATCATCAGAAGAGGAGGATGTTTGTCCAACTTGTCTTGAAGAATACACCAAAGAGAATCCAAAGA TAATGACTAAATGCTCTCATCATTTTCATCTTGGTTGCATTTATGAGTGGATGGAGAGGAGTGACAACTGTCCAGTTTGTGGAAAGGTGATGGTATTTGA AGAAACACTTCCTCTTGATTAAAAGCTTTGTTTGGTGGATTAATGCAGCAACAGAAGAAAGTGAGAATGAATATAAAGTATAAACACTGTGAATACAGCA CAGATTAAGTGCTTATTATGTATAGTTAAGTATGAAAAAAAAGTTTTCTTAACCCTTGTTGTGAGTTTAATCTCATCCAAGTTGTTTTCATATTGAATAT CCCACATGGCCAATATTGTGAAGGAAAAGAAAGAAAATGGAATTTTAGATGGAAACCTTGGCATGGCTTAAACAGTTTCACCTATTATTGTTTCTGTCAT ATAAACATGTTCGTTCAAAGTGGAACTGAACTGATAATGAAGTAGGAAAC
• Tissue: pods
• Gene name: LI_gene_173352;
• Additional information: details;

Expression of Ll_transcript_457579

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.7
• PS2: 0.8
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_457579

• Blastp: E3 ubiquitin-protein ligase At3g02290 from Arabidopsis with 59.57% of identity
• Blastx: E3 ubiquitin-protein ligase At3g02290 from Arabidopsis with 57.83% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G02290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428703.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;