Ll_transcript_457585

• Id Trinity: TRINITY_DN49927_c2_g3_i6
• Name Transcript: Ll_transcript_457585
• Sequence: CTGGGCAAAGGAAACGGTCTGCTAATCCATAATTCGGGGCATCTGAACTGAAGAGAGAGGTTGGTTTGTGGATGCTTTGCGACTTGTGCAAGATTATGGT TCTGTTGAAGGCTCCTTTTCTCTAAGAATGCATGCTAGATGATTTTATTTAAGCAGTTGAAGAGTGGGAAAAAATTCAAGCTAAATAAAGTGATTGGGAA GCTGGAACAATGGGTTCTGTTTGTTGTTGTTTCAGTTTTGACGATTTTGAAGATTACGTAAACCCAAATAGTTCCGTGTATAGGAACTGTGTGTGTCTCA GTTGCTTTATACAGAACCTCTTGACCGTGTATGCAGCAATATTCCGTAGAGGGGAAGTGCATTCAGTTCCTTCATCTCTTCAAGGGGCAGCATCCTTGTC TTCTACAGCATCACTTGATAATTCTCTATCTGACATGTACCGTTCTCCTCCAAGGCCCTTACCTTATGATGCAGAACCGAGATATTTTCGCTCAAGGCGT GAGAAGGGTTCAAGTCATTTGAATGAGGAATCCGAACCTCTGAGAAGTGATGTAGATATGGACCTAGAATCTTTAAGTTCAGGAGACAAATGGAATGAAT GTGCCGGTGAAGATGGAACAAAGGAATATTGTTCCAAGTCCTCACTAAAACTTTCATCAGCAAAATATACAACTGGAGTTGGGCTTGTCTATGCATCGTC AGAAGAGGAGGATGTCTGTCCAACTTGTCTCGAAGAATACACCAAAGAGAATCCGAAAATAATGACCAAATGCTCTCATCATTTTCATCTTGGTTGCATT TATGAGTGGATGGAGAGGAGTGACAGTTGTCCAGTTTGTGGAAAGGTGATGGTTTTCGACGAAACCCTTACTCTCGATTAATAGGTTTTGCTTGGTGGAT TAAGCCAGCAACAGAAAAAAAAGGAAGAATGAACATAGTATAATGATTGTGAATACTGCACAGAATAAGTGCTTGTTTTGTATAGTTAAGTGTGAAAAGT TTTCTTCACCATTGTTGTGAGTCCTCACTCTCATCCAAGTTGTTTTTATGTTGAATGTTGAGTTTCCTCCATGAAGGAAAAAAGAAAGAAAATGGAATTT TATATGGAAACCTTGTCATTGCTTCAAAATGTTGATATATTATTGTTTCTTTGTGGTATAAATAAGCATGTTCATTCAATGTGGAACTGAACTGATCATG ACTTAGAAAACTATTAATTCAACATCAGAATCATTATTGTACGGGAGGGATCAAGTTACTCGTAGACTTACTCCTCATCCTAACCATCA
• Tissue: pods
• Gene name: LI_gene_173352;
• Additional information: details;

Expression of Ll_transcript_457585

FPKM

• PAB: 8.3
• PNAB: 6.6
• PS1: 8.7
• PS2: 8.3
• PS3: 10.1
• PW1: 9.1
• PW2: 11.6
• PW3: 17.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_457585

• Blastp: E3 ubiquitin-protein ligase At3g02290 from Arabidopsis with 59.13% of identity
• Blastx: E3 ubiquitin-protein ligase At3g02290 from Arabidopsis with 57.21% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G02290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442756.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;