Ll_transcript_456102

• Id Trinity: TRINITY_DN49928_c0_g2_i20
• Name Transcript: Ll_transcript_456102
• Sequence: CACTGATTAGAATCAATATTTTAATTTTTAATAAACAAAATCAGCATTGTTCATAAGAACCTTCATCAGCATCAACGTGTTCTTCATTTTCTGATTCCGT ATTTTATGTTCCTTTGAGTTCTCTTCATCACTGATTCTAGATTTTGTGTGAGTGGTTATTAGCCTTAACGTGCGCACCATCGGCGTAGAAAATGGAGGAA GCGCCCACAAATTCTATTATGTGGAAAGCGAAGAGCGCCTTTCATTCCGCAGCTTCAAAAGCGGAACGTGTCTTCAAATCTAATCAAGATCGGGAGAACA ATAAGGAATTGAAAAACAACGTGATCACGCAACCGGAACAACTTGATTCTTCTCACAACGATAACTTCTCAAAGCTTCGCAGTAAACTGAAAGACATAAA GTGGAGGCCTCCACATACAGGAATAAAGCAGGATTGGCAAGATAGAATTAAGAACATCCAGACAGGGAGAAAAGAAGTCAAAGATACAGATAAAGTTGGG GAGACAAACATGGCAATTCCATTTTATGATGAAAACTTGTTGATGCTGAATATGAAAAATGATTTTGAGGCCAAGGCTTCAGAAGCAATTCCCTCGGTTG AAAGCTTAACTGCTGCAACTAAAGATCCTATTCCCGCGTCGTCGGTACTGAAGCAATTGGCCGTTGCTGTTGAGGCTGGAAGTAAAACAAAGTCCATGAA AGATTTTATAGCTTCATCAGGAAGTTCTTCTCCTGCCATTGAGAGGGCTGCCTCGACTCTTTCTGCAGTAAAGGCTTTAGTGTTGCGTGAAAAGGAGGAT AAACTAACCTCTGACTTTAGTAGTGATGAGAGAGTTTTGCATCTGATTAGTTCTCTGTTTGATCCAGAGGGAGATTTTCTCAAAAGGAAGATCATCTCCA ATCCTGAAGAACCTTCCATAGCATTTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTCATTGGAAACTTCAA GACTGTTCGTAAGATGGCACTTTTCTGGCACAGAGTTATTGTTGAACTAAGAAAATTTTGGTCTGAAGAACAACAATTACCTGGAGTCCCTCGGGATGCT ATCCCAGATCTCAACTCATGTCTTCTATATCAACAGTTTCAAGTAATTAATTGTTGCATCTCACGGAAAAGGCTCCACATTATTGCAACCGAATCTCTAG AGTGTATGATGAAGGAAGCAAACTCAACTGTAAAACACTCAGCTAAATATAATGACGGAAGTCCTGCAAGCCCTGTTCTATATGCTAGGTTAAGTACCGG GGAGCTTGTTCTTCGAATTGGTGCAGATTGCCCGGCTGGAGATCTGACATTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTTTCACCCAGGAAGGACCT CTACTTACAGAAGATCTAATCAGAGAGCACGAGGAGTTTGTGCTGAGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCCGATATGCAGGCTT TCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGGTGGCACTCTCCTCCCGATTGGTCAGAAAATGAAGCAATTACTGAGGATAGTAATGT TTTTTATGGTGGTGAGTTGTCTACAAGAGGTCAGTTAAGCTTGCGAATGCGAAAGGAAGGTAATTTGTGGCGTCAATTGTGGGAAACTTCTAAACCAGTA CCTGCTGTGAAACAGGCACCTCTATTTGATGAGGATCTGGCTGTGGAGGGAATTCTCAATGCATTTGAGGACATCCATCCTTCAGAGCTTTTCAGGCAGC TGTTTGTTTCTTTACTTGGTTTAGGATTTACGATTGCTGAAGCTATGCTGTTCGGCAACAATGACTTGTCAAAGTTGTTCTACGACTGCAAAGAGTACGT AGTTGCCACATGTCAAAGCAGCAACTGGTGCGAGAAAGTCCATGACCTTGTCCAGGTATATGAAACAGTGGAGACAATTTTACTGAATCCTGAGGAATCA CTAAAGATGATAAAGCAAACAGAAGAAGAAACAAGGACTACTGGAGAACCAAAAGCCCGATTTAAGAGGCTCGGCCTTATATTTGGTGGCAAAGATATGC TATGGAGAAACCCTGTATCAAATGATGAAGAAAAGTCAATTAGGCAATCTTTGTCTAACTTCTTGGATGGGAAGTCATCTCTATTTTCAAAGAATCCTCG TAAGTCTGGATGCCCATCTCCTTCTGAGAAACCACCTTCTCTCCTAACTGATTGGACAATGGTTTAGACAAATTTCATCCCCACCCTATTTATATATGAT TAGGCACAGTTTTTTTGGGGGACCCCCTCCCTCCCCCCTTTAAGTGGATAACTGTAAATTTTCTTTATTTTTCCAAAACTTAAATGTTGAATTCTGTTCC AAAATTTAATGAATACTTCATACTTCTTTGATCAAGCCCGGAATAAAGATATGGCTTTTGCCCCTACTCTAGTTGAT
• Tissue: pods
• Gene name: LI_gene_173358;
• Additional information: details;

Expression of Ll_transcript_456102

FPKM

• PAB: 2.8
• PNAB: 1.6
• PS1: 4.4
• PS2: 3.1
• PS3: 3.6
• PW1: 2.5
• PW2: 3
• PW3: 2.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456102

• Blastp: Rab3 GTPase-activating protein catalytic subunit from Sophophora with 28.9% of identity
• Blastx: Rab3 GTPase-activating protein catalytic subunit from Danio with 33.43% of identity
• Eggnog: RAB3 GTPase activating protein subunit 1 (Catalytic)(ENOG410Y2R4)
• Kegg: Link to kegg annotations (Dmel_CG31935)
• CantataDB: Link to cantataDB annotations (CNT0002243)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435610.1)
• Pfam: Rab3 GTPase-activating protein catalytic subunit (PF13890.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;