Ll_transcript_456107

• Id Trinity: TRINITY_DN49928_c0_g2_i24
• Name Transcript: Ll_transcript_456107
• Sequence: TCTTTGTTGTTGCACTCTATATGTTATTTTGGCACTGTCAACTGTTGGATGCAATTTTGTTAATCCAAAGACATAAATAATACTCTTGTTTCTGTCGTTT AGAGAGATTGTCCAGCTTAACGATACAACTAGCCCCTTTCTTAAATTTTTTGGACCTTTTGAATAGGGCTGGAAGTAAAACAAAGTCCATGAAAGATTTT ATAGCTTCATCAGGAAGTTCTTCTCCTGCCATTGAGAGGGCTGCCTCGACTCTTTCTGCAGTAAAGGCTTTAGTGTTGCGTGAAAAGGAGGATAAACTAA CCTCTGACTTTAGTAGTGATGAGAGAGTTTTGCATCTGATTAGTTCTCTGTTTGATCCAGAGGGAGATTTTCTCAAAAGGAAGATCATCTCCAATCCTGA AGAACCTTCCATAGCATTTTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTCATTGGAAACTTCAAGACTGTT CGTAAGATGGCACTTTTCTGGCACAGAGTTATTGTTGAACTAAGAAAATTTTGGTCTGAAGAACAACAATTACCTGGAGTCCCTCGGGATGCTATCCCAG ATCTCAACTCATGTCTTCTATATCAACAGTTTCAAGTAATTAATTGTTGCATCTCACGGAAAAGGCTCCACATTATTGCAACCGAATCTCTAGAGTGTAT GATGAAGGAAGCAAACTCAACTGTAAAACACTCAGCTAAATATAATGACGGAAGTCCTGCAAGCCCTGTTCTATATGCTAGGTTAAGTACCGGGGAGCTT GTTCTTCGAATTGGTGCAGATTGCCCGGCTGGAGATCTGACATTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTTTCACCCAGGAAGGACCTCTACTTA CAGAAGATCTAATCAGAGAGCACGAGGAGTTTGTGCTGAGGACAGGGAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCCGATATGCAGGCTTTCAAGGC TGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGGTGGCACTCTCCTCCCGATTGGTCAGAAAATGAAGCAATTACTGAGGATAGTAATGTTTTTTAT GGTGGTGAGTTGTCTACAAGAGGTCAGTTAAGCTTGCGAATGCGAAAGGAAGGTATATGAATAGTCTTCTCTGTCTCAAATTATTACTTAATTTATACTG CAACACAATTTTGAGGCTTTTTTCTATGCCAATGGACCATCAGCATGTGATAAAATTGTGATTTCTTTGCTTACAACAAAAATATTTTGTTCACTGTATC TTGTTGCCATTTCTGAAAAAATGTTTGTAATATGCTTATAAGTTTTGTCATCATTTACGTGTATACTATGGATTTGATTGTCAAAGAGGTTGTATTATGG CGAATTTTGTGAACAGTATACGTTAAGTTCACACTTTTTATGGTAGAAGTTGTTTAGTGCATGCCTTATGGGAGAACTTCTGTGATAAACTGCTTAGCGT TGGGTTCAGATTGTCAGATAGTAGAATTATAATTTTTTGAACTATGAAATGATAATTTTCATCATGAATCAATTGGTGATGCATACACCTACCCTCCCTA AACGTGGGAGCCTCGTATATTGGGCCACCCTTATGAATCAATTGGTGTCAGCACAAGATACAACAACAACGAAGCCTTGATTTTATTAGGTGGTGGTATA CTGGTATCCACATAAGATCTTTAGGTTTAATATTCCTAACTGCCTTGGGCAATCCATTGAGTTGGAAGTGTTGACATCTTATAACTCACTCTTTATGAAT ATAAGATATACACATAATGCCTAAATCGAATGTCACATGTGGTTAAATATATGCAGATAAGTTAGTCTCTGAGTCCTGAGTTTTTTCTTTGTTTCATTAT AACATGGCACTGTTTAGCACCTATTTTCTTATGAAGTCATATCATAAAGCTTACCTGAAATCCATTACATGTTGATGGTAGGTAATTTGTGGCGTCAATT GTGGGAAACTTCTAAACCAGTACCTGCTGTGAAACAGGCACCTCTATTTGATGAGGATCTGGCTGTGGAGGGAATTCTCAATGCATTTGAGGACATCCAT CCTTCAGAGCTTTTCAGGCAGCTGTTTGTTTCTTTACTTGGTTTAGGATTTACGATTGCTGAAGCTATGCTGTTCGGCAACAATGACTTGTCAAAGTTGT TCTACGACTGCAAAGAGTACGTAGTTGCCACATGTCAAAGCAGCAACTGGTGCGAGAAAGTCCATGACCTTGTCCAGGTATATGAAACAGTGGAGACAAT TTTACTGAATCCTGAGGAATCACTAAAGATGATAAAGCAAACAGAAGAAGAAACAAGGACTACTGGAGAACCAAAAGCCCGATTTAAGAGGCTCGGCCTT ATATTTGGTGGCAAAGATATGCTATGGAGAAACCCTGTATCAAATGATGAAGAAAAGTCAATTAGGCAATCTTTGTCTAACTTCTTGGATGGGAAGTCAT CTCTATTTTCAAAGAATCCTCGTAAGTCTGGATGCCCATCTCCTTCTGAGAAACCACCTTCTCTCCTAACTGATTGGACAATGGTTTAGACAAATTTCAT CCCCACCCTATTTATATATGATTAGGCACAGTTTTTTTGGGGGACCCCCTCCCTCCCCCCTTTAAGTGGATAACTGTAAATTTTCTTTATTTTTCCAAAA CTTAAATGTTGAATTCTGTTCCAAAATTTAATGAATACTTCATACTTCTTTGATCAAGCCCGGAATAAAGATATGGCTTTTGCCCCTACTCTAGTTGAT
• Tissue: pods
• Gene name: LI_gene_173358;
• Additional information: details;

Expression of Ll_transcript_456107

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.1
• PS2: 0.5
• PS3: 0.2
• PW1: 0
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_456107

• Blastp: Rab3 GTPase-activating protein catalytic subunit from Homo with 32.56% of identity
• Blastx: Rab3 GTPase-activating protein catalytic subunit from Homo with 32.56% of identity
• Eggnog: RAB3 GTPase activating protein subunit 1 (Catalytic)(ENOG410Y2R4)
• Kegg: Link to kegg annotations (22930)
• CantataDB: Link to cantataDB annotations (CNT0002243)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435612.1)
• Pfam: Rab3 GTPase-activating protein catalytic subunit (PF13890.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;