| Id Trinity | TRINITY_DN49928_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_456077 |
| Sequence | CTTACTATAAATGTTTAGTTTGAACCATTCATGATTTAAAAGCTATGGATGGAGAGAGAGGCGTGATAAATTTGGCGCTTAAGGCTGTTTTAGATGCATT TGGCGCTTTGGAATATTTTGGCGCAGAATTGGTGATCTTCCACTATCACTACGGCACTGTTACTTCACTCATAGGAACTAAGGAGCAAGGAAAAGCTTCA AAAATCAACTTATCTTAGGCTTAAAGTGCGCACCATAGGCGCAGAAAATGGAGGAGTCAGCCACAAATTCTATCATGTCCAAAGCGAGGAGCGCCTTCCA TTCCGCTGCTTCAAAAGCGGAGCGTGTTTTCAAATCTAATCAAGATCGTGACAATAAGCATTTGATTACACAACCGGAACTTGATTCTCCTCACAAACAC AATCTCTCTAAGCTTCGCAGTGAATTGAAGAACATAAAATGGCGGACTCCACACAGAGGAATTAAGCAGGATTTGCAAGAAAGAATTAAGAACATCCGGA TAGGGAGAAAAGAAGTTCAAGATACAGATAAAGTTGGGGACGCAGACATGGCAATTCCATTTTATGATGAAAACTTGTTGATGCTGAATATGAAAAATGA TTTTGAGGCCAAGGCTTCAGAAGCAATTCCCTTGGTTGAAAGCTTAACTGCTGCAAACATAGACCCAATTCCTCCGTCTTCGGTACTAAAGCAATTGGCT ATTTCTGTTGAGGCTGGGAGTAAAAAAAAGTCCATTAAAGATTTTATCGCTTCATCAGGAAGTTTTTCACCTGCCATAGAGAGGGCAGCCTCAACTCTTT CTGCGGTGAAGGCTTTAGTGTTGCGTGAAAAGGAGGATAAACTAACCTCTGACTTTAGTAGTGATGAGAGAGTTTTGCATCTGATTAGTTCTCTGTTTGA TCCAGATATTCGCAGAGGGAGATTTTCTCAAAAGGAAGATCATCTCCAATCCTGAAGAACCTTCCATAGCATTTTTGCCAAGAGATATTCATGGTGCTCC TCCTGAAAGCCTTGTTGTTAAGCTAGCTGAAGTCATTGGAAACTTCAAGACTGTTCGTAAGATGGCACTTTTCTGGCACAGAGTTATTGTTGAACTAAGA AAATTTTGGTCTGAAGAACAACAATTACCTGGAGTCCCTCGGGATGCTATCCCAGATCTCAACTCATGTCTTCTATATCAACAGTTTCAAGTAATTAATT GTTGCATCTCACGGAAAAGGCTCCACATTATTGCAACCGAATCTCTAGAGTGTATGATGAAGGAAGCAAACTCAACTGTAAAACACTCAGCTAAATATAA TGACGGAAGTCCTGCAAGCCCTGTTCTATATGCTAGGTTAAGTACCGGGGAGCTTGTTCTTCGAATTGGTGCAGATTGCCCGGCTGGAGATCTGACATTG TTGGAAACTGGCGAGCCTGTGTACTCTCCTTTCACCCAGGAAGGACCTCTACTTACAGAAGATCTAATCAGAGAGCACGAGGAGTTTGTGCTGAGGACAG GGAGTGTTGGTGCTGGGTGCTCTCAACTCCTCTCCGATATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGGTGGCACTC TCCTCCCGATTGGTCAGAAAATGAAGCAATTACTGAGGATAGTAATGTTTTTTATGGTGGTGAGTTGTCTACAAGAGGTCAGTTAAGCTTGCGAATGCGA AAGGAAGGTATATGAATAGTCTTCTCTGTCTCAAATTATTACTTAATTTATACTGCAACACAATTTTGAGGCTTTTTTCTATGCCAATGGACCATCAGCA TGTGATAAAATTGTGATTTCTTTGCTTACAACAAAAATATTTTGTTCACTGTATCTTGTTGCCATTTCTGAAAAAATGTTTGTAATATGCTTATAAGTTT TGTCATCATTTACGTGTATACTATGGATTTGATTGTCAAAGAGGTTGTATTATGGCGAATTTTGTGAACAGTATACGTTAAGTTCACACTTTTTATGGTA GAAGTTGTTTAGTGCATGCCTTATGGGAGAACTTCTGTGATAAACTGCTTAGCGTTGGGTTCAGATTGTCAGATAGTAGAATTATAATTTTTTGAACTAT GAAATGATAATTTTCATCATGAATCAATTGGTGATGCATACACCTACCCTCCCTAAACGTGGGAGCCTCGTATATTGGGCCACCCTTATGAATCAATTGG TGTCAGCACAAGATACAACAACAACGAAGCCTTGATTTTATTAGGTGGTGGTATACTGGTATCCACATAAGATCTTTAGGTTTAATATTCCTAACTGCCT TGGGCAATCCATTGAGTTGGAAGTGTTGACATCTTATAACTCACTCTTTATGAATATAAGATATACACATAATGCCTAAATCGAATGTCACATGTGGTTA AATATATGCAGATAAGTTAGTCTCTGAGTCCTGAGTTTTTTCTTTGTTTCATTATAACATGGCACTGTTTAGCACCTATTTTCTTATGAAGTCATATCAT AAAGCTTACCTGAAATCCATTACATGTTGATGGTAGGTAATTTGTGGCGTCAATTGTGGGAAACTTCTAAACCAGTACCTGCTGTGAAACAGGCACCTCT ATTTGATGAGGATCTGGCTGTGGAGGGAATTCTCAATGCATTTGAGGACATCCATCCTTCAGAGCTTTTCAGGCAGCTGTTTGTTTCTTTACTTGGTTTA GGATTTACGATTGCTGAAGCTATGCTGTTCGGCAACAATGACTTGTCAAAGTTGTTCTACGACTGCAAAGAGTACGTAGTTGCCACATGTCAAAGCAGCA ACTGGTGCGAGAAAGTCCATGACCTTGTCCAGGTATATGAAACAGTGGAGACAATTTTACTGAATCCTGAGGAATCACTAAAGATGATAAAGCAAACAGA AGAAGAAACAAGGACTACTGGAGAACCAAAAGCCCGATTTAAGAGGCTCGGCCTTATATTTGGTGGCAAAGATATGCTATGGAGAAACCCTGTATCAAAT GATGAAGAAAAGTCAATTAGGCAATCTTTGTCTAACTTCTTGGATGGGAAGTCATCTCTATTTTCAAAGAATCCTCGTAAGTCTGGATGCCCATCTCCTT CTGAGAAACCACCTTCTCTCCTAACTGATTGGACAATGGTTTAGACAAATTTCATCCCCACCCTATTTATATATGATTAGGCACAGTTTTTTTGGGGGAC CCCCTCCCTCCCCCCTTTAAGTGGATAACTGTAAATTTTCTTTATTTTTCCAAAACTTAAATGTTGAATTCTGTTCCAAAATTTAATGAATACTTCATAC TTCTTTGATCAAGCCCGGAATAAAGATATGGCTTTTGCCCCTACTCTAGTTGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_173358; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_456077
| Blastp | - |
|---|---|
| Blastx | Rab3 GTPase-activating protein catalytic subunit from Xenopus with 31.13% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002243) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435612.1) |
| Pfam | - |
| Rfam | - |
| GO | - |