Ll_transcript_458520

• Id Trinity: TRINITY_DN49931_c1_g2_i4
• Name Transcript: Ll_transcript_458520
• Sequence: ACAGGTCACCTGAACTATTTCCACCCTTATTTGTATTTCAATATCTTTTTATGCAATTTTTGTAGTCTTGATGATATTGCTCTTACATTAGCAATCTTTC ACTATTACTTTGTTACTGTATTTTTATCATAGTATTTATTTGATTTGGACGTCATGTGGCAGATTGTATCATCATGGATCAAGAAGGTTGCAATGTGGCA CCGATTACCAAAGCACCAGATTGCCGTTACTTCTGCCACCATATTGACATATGGATCTTATGGCCTTGGAGTTCACAGCCCAGAGTCTGACATTGATGCG TTGTGTCTTGTTCCATTCTTTGTCACCATAGCGGGAGACTTTTTTATTGCTTTGCATAACATGCTTAAGAGGAGACCTGAAGTATCTGATATTCAATGTG TCAAGAGTGCAAAAGTCCCTCTCATAAGATTTAAATTTGATGGAATTTCCATTGATCTCCCATACTCTCGACTTAAAGTACTATACGTTCCTGAGAATGT TGATATACTAAATCCATTCTTCACGAGGAAAATTGATGATACCAGCTGGAAAAGCTTGTCTGGCGTGCGTGCAAATAAGCGAATTCTGCAGCTAGTTCCA AATGTTGAGAAATTTCAATCTCTGCTACGAATCCTTAAACTTTGGGCAAAAAGAAGAGGATTGTATGGATCTTTACTTGGTTATCTGGGAGGAATTCATT TGGCAATTCTTGCAGCTTATGTTTGTCAAAGACATCCTGATGCCACCTTAAATGCTCTGATTACAAACTTTTTCCGAACATTTGCATTTTGGCCCTGGCC TAAACCAGTGTCGCTGCATGAAGCAATGTTGCTAACATCTATAGATACTATTGAAACACATCCCTTTTCCTTCATGCCTATTCTGTTACCATCTAGTCCT TATGAGTTCTGCCATTCAAATATAACTAAAAGTACATGCTACCGGATCAGGTCCGAGTTTACACGTGGACATATTATGACTAGGGATCTTTTGAAGTCAG ATTTCATTTGGGATAATGTATTTCAGCCTTTTCCATACTCCAAAAGATATTCCCAATTCTTCAAGATTTACCTCTCAACGTCTGATCAATTCGAGCTCGG AAACTGGGTTGGTTGGGTCAAGTCACGTTTTCCTGGTCTTCTTGTCATTGTAAGTTGCTCAAATGGTAAATCTTGTTATTCCTATGCTATTATGTTTACT TGGTTAGTAGAATATTTGTGGGGCGGTATTGAAGAATTGACTATGGTTGCCCTTTATTCACTGCAATCACTCTTAATAGCATTTTCCTATTTATTTGTAA AAATCTTCCTGTTATGCTTTATAAATTATAACTGTAATGGTTAGAGGAGATAAGAAGGAGAGTTTGCACAATGCCTTCAAGGCCGGAGCAACATTTTCCT GCTTAATTCCTCTCACACGACTTGTCATGCCTATTTGTGCAGTACACATGTCCTCTTCTGACGCAACAGTAAGGTTGTTGCATAGGGACATGAGGTTACA GGTTTAAATCCTAGAAACAAACTCTATGTTTGCGGGATAAGGCTATATACATCTACTCGACGTCAGACCCGACTAAAATGGAGCCTCGTGCACTGTGCCG CTCTTTTTACACGTCCTCTTCTGCCGTTAATATTGTTTTTTCTTTTGGGTTTTGATAGGAATTTATTGCTAACCGTTCCAAATGTTTAACCACCATTTCC TCATGTGGTTTTGTTTGATGCAGCTGGACAGGGTCCAAGGATTTTGTGACCCGAACCCTACAGAATTTGTCGACAACGAGAAAACTGAGCCGAATGTAGT GTTCTACTGGGGCTGGCAACCTGTTGATAAGAATAGCTTGGTGGACATAGAGTTGGTAGATGGAGAGTTCATGAAGATCGTTGGGAATGGTTATGAAGGT TCTCCTGGGAGGATAGAGTTATCAATCATAATACCTTCTCAGCTTCCCAACAATGCTATGTTTGATGATGAAACTATTAAGGGTAAAAAAACATGCAGGA ATACAATTGATGATGATGATGATGAGTCCGGTGCACTTGAAACATCTTTAACCTTGTCTTGTTGGCCATGTTTCACCTAGTTGTGAGCCCTGTATTGTTA TGGTGGCATAGGTTGCACAGGATCAGTTGAATGAGTAGAGTTTAGTGGTATAGGTGGTATAGTAGAAAGAAAAAG
• Tissue: pods
• Gene name: LI_gene_173376;
• Additional information: details;

Expression of Ll_transcript_458520

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0
• PS2: 0.4
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_458520

• Blastp: Nuclear poly(A) polymerase 3 from Arabidopsis with 53.95% of identity
• Blastx: Nuclear poly(A) polymerase 3 from Arabidopsis with 58.46% of identity
• Eggnog: polyA polymerase(COG5186)
• Kegg: Link to kegg annotations (AT3G06560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440147.1)
• Pfam: Poly(A) polymerase central domain (PF04928.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;